| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108810917
Identifier: 108810917
GI number: 108810917
Start: 878830
End: 879135
Strand: Reverse
Name: 108810917
Synonym: YPN_0752
Alternate gene names: NA
Gene position: 879135-878830 (Counterclockwise)
Preceding gene: 108810921
Following gene: 108810916
Centisome position: 19.39
GC content: 40.85
Gene sequence:
>306_bases ATGGAGCATATAAATACATGGCTACTAATTAAGCCAAATGGAGGGTGCCCATTGATGACATACACGCTGGCATTATCGGG TGGTCAGACGGGCAATTCGATTCATCATGTTCAGATCAATGCAGAGACGTTATTAACCGTGGTGCGAAATACATCAATCT ATGTACAAATTCATCACGGCCTCATATTCATGTCTCGTTATCATCCAACGGCAGATAAAATTGAATTTTTTATCCCCCCC GCGCCTTCAGTACGATTAATTCCTTCAGCATCATTTTTCTTCAACACCATTAAGCAGAAAGCATAA
Upstream 100 bases:
>100_bases ATTTATGTTCGTTTTTTTATACCTCAAGGCTATTGTAATTATATACGCATAAATGTAAAAGCAAATGATATCAATTATCA TTACTGTTTAAGAAAAAGAA
Downstream 100 bases:
>100_bases TCGCCCCCTTCCTGGTGATCCCTTCTTACTTTCTCATCCATAGGCAATACCTATTCCAGCAATAGGCAAAGCCGCCCTAT TAGCTTGATAAAGGTCAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MEHINTWLLIKPNGGCPLMTYTLALSGGQTGNSIHHVQINAETLLTVVRNTSIYVQIHHGLIFMSRYHPTADKIEFFIPP APSVRLIPSASFFFNTIKQKA
Sequences:
>Translated_101_residues MEHINTWLLIKPNGGCPLMTYTLALSGGQTGNSIHHVQINAETLLTVVRNTSIYVQIHHGLIFMSRYHPTADKIEFFIPP APSVRLIPSASFFFNTIKQKA >Mature_101_residues MEHINTWLLIKPNGGCPLMTYTLALSGGQTGNSIHHVQINAETLLTVVRNTSIYVQIHHGLIFMSRYHPTADKIEFFIPP APSVRLIPSASFFFNTIKQKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11304; Mature: 11304
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHINTWLLIKPNGGCPLMTYTLALSGGQTGNSIHHVQINAETLLTVVRNTSIYVQIHHG CCCCCEEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECHHHEEEEEECCEEEEEEECC LIFMSRYHPTADKIEFFIPPAPSVRLIPSASFFFNTIKQKA EEEEEECCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHCC >Mature Secondary Structure MEHINTWLLIKPNGGCPLMTYTLALSGGQTGNSIHHVQINAETLLTVVRNTSIYVQIHHG CCCCCEEEEEEECCCCCEEEEEEEEECCCCCCEEEEEEECHHHEEEEEECCEEEEEEECC LIFMSRYHPTADKIEFFIPPAPSVRLIPSASFFFNTIKQKA EEEEEECCCCCCCEEEEECCCCCEEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA