| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is sfsA [H]
Identifier: 108810859
GI number: 108810859
Start: 812482
End: 813342
Strand: Reverse
Name: sfsA [H]
Synonym: YPN_0694
Alternate gene names: 108810859
Gene position: 813342-812482 (Counterclockwise)
Preceding gene: 108810860
Following gene: 108810858
Centisome position: 17.94
GC content: 46.23
Gene sequence:
>861_bases ATGCCTGCTAACGCCAACTTGCCACCCTTTAGCGCCAACTTACTGTCAGTGAACTCAGATTCGCGGTCAATTAGCCCTAA TTCGCCACCGACTCACGCCAAATCGCTGCAATTTAACGCCCCTTTGCTGCAATTTACTCCCCCGTTACAACCCGCCACAC TTATTCTGCGGTACAAACGCTTTTTAGCTGATATTGTGACGCCCGCTGGAGAGGCGCTGACTATTCATTGCGCGAATACT GGAGCAATGACGGGTTGTGCTACGCCTGGAGATACCATCTGGTATTCAACATCAGATAATCCGAAACGGAAGTATCCTCA GAGCTGGGAGCTGACACAGACCCAAACCGGTGATTGGATTTGTGTCAATACGATGCGCGCCAATGAGTTAGTGAACTTGG CAATTGAAAAAAATCAGATTGCTGAATTATCTGGTTACAATTTTGTCAGAAAAGAAGTTAAGTATGGCGAAGAGAACAGC CGTATAGACTTGTTATTGCAGGCAGAAGATAGACGTGACTGCTATATTGAAGTCAAATCAGTCACCTTATTACAACAACA GTGTGGTTATTTTCCAGATGCGGTTACTCTAAGGGGCCAGAAGCATCTTCGGGAATTACAAAACAGGGTTGTCAACGGCC ACCGGGCAGTACTTTTCTTTGCGGTATTGCATACGGGAATCAAACAAGTTGCACCAGCCCGACACATTGATCGTCGCTAT GCAGAGTTGCTAGTCCAGGCTCAGCAGGCAGGAGTAGAGGTTATTTGTTATGGTTTTCAACTATCGCCTGACGGTATCGA GCTAAACACCCGTTTACCGTTATTACTGGACGAAATGCTTTCATCAGAAAACGCTGAATAA
Upstream 100 bases:
>100_bases GCGGACCATTTCTCGCTGTATGAATCGGTCTTCGCGCGGGGCCGCACCCGCTATAACATCGTACAAAGCTGGCCGCTGGC TGGCAGTGAAAGGAAACCAG
Downstream 100 bases:
>100_bases AAAAGCAATTACTGGGTAAAGTGGCTCGCCAAATACGCCTTCCTTCACACCATTGTCAAGCAGGCGACAGGAATAATTGC CAACCTACCTCCCTTCTGTT
Product: sugar fermentation stimulation protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MPANANLPPFSANLLSVNSDSRSISPNSPPTHAKSLQFNAPLLQFTPPLQPATLILRYKRFLADIVTPAGEALTIHCANT GAMTGCATPGDTIWYSTSDNPKRKYPQSWELTQTQTGDWICVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKYGEENS RIDLLLQAEDRRDCYIEVKSVTLLQQQCGYFPDAVTLRGQKHLRELQNRVVNGHRAVLFFAVLHTGIKQVAPARHIDRRY AELLVQAQQAGVEVICYGFQLSPDGIELNTRLPLLLDEMLSSENAE
Sequences:
>Translated_286_residues MPANANLPPFSANLLSVNSDSRSISPNSPPTHAKSLQFNAPLLQFTPPLQPATLILRYKRFLADIVTPAGEALTIHCANT GAMTGCATPGDTIWYSTSDNPKRKYPQSWELTQTQTGDWICVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKYGEENS RIDLLLQAEDRRDCYIEVKSVTLLQQQCGYFPDAVTLRGQKHLRELQNRVVNGHRAVLFFAVLHTGIKQVAPARHIDRRY AELLVQAQQAGVEVICYGFQLSPDGIELNTRLPLLLDEMLSSENAE >Mature_285_residues PANANLPPFSANLLSVNSDSRSISPNSPPTHAKSLQFNAPLLQFTPPLQPATLILRYKRFLADIVTPAGEALTIHCANTG AMTGCATPGDTIWYSTSDNPKRKYPQSWELTQTQTGDWICVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKYGEENSR IDLLLQAEDRRDCYIEVKSVTLLQQQCGYFPDAVTLRGQKHLRELQNRVVNGHRAVLFFAVLHTGIKQVAPARHIDRRYA ELLVQAQQAGVEVICYGFQLSPDGIELNTRLPLLLDEMLSSENAE
Specific function: Probable Regulatory Factor Involved In Maltose Metabolism. [C]
COG id: COG1489
COG function: function code R; DNA-binding protein, stimulates sugar fermentation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sfsA family [H]
Homologues:
Organism=Escherichia coli, GI1786340, Length=234, Percent_Identity=63.6752136752137, Blast_Score=328, Evalue=3e-91,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005224 [H]
Pfam domain/function: PF03749 SfsA [H]
EC number: NA
Molecular weight: Translated: 31951; Mature: 31820
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPANANLPPFSANLLSVNSDSRSISPNSPPTHAKSLQFNAPLLQFTPPLQPATLILRYKR CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHH FLADIVTPAGEALTIHCANTGAMTGCATPGDTIWYSTSDNPKRKYPQSWELTQTQTGDWI HHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCHHCCCCCCCCEECCCCCEE CVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKYGEENSRIDLLLQAEDRRDCYIEVKS EEEECCCCCEEEEEECCCHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEHH VTLLQQQCGYFPDAVTLRGQKHLRELQNRVVNGHRAVLFFAVLHTGIKQVAPARHIDRRY HHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH AELLVQAQQAGVEVICYGFQLSPDGIELNTRLPLLLDEMLSSENAE HHHHHHHHHCCEEEEEEEEEECCCCEEECCCCHHHHHHHHHCCCCC >Mature Secondary Structure PANANLPPFSANLLSVNSDSRSISPNSPPTHAKSLQFNAPLLQFTPPLQPATLILRYKR CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCEEECCCCCCHHHHHHHHHH FLADIVTPAGEALTIHCANTGAMTGCATPGDTIWYSTSDNPKRKYPQSWELTQTQTGDWI HHHHHHCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCCCCHHCCCCCCCCEECCCCCEE CVNTMRANELVNLAIEKNQIAELSGYNFVRKEVKYGEENSRIDLLLQAEDRRDCYIEVKS EEEECCCCCEEEEEECCCHHHHHCCCHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEEHH VTLLQQQCGYFPDAVTLRGQKHLRELQNRVVNGHRAVLFFAVLHTGIKQVAPARHIDRRY HHHHHHHCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH AELLVQAQQAGVEVICYGFQLSPDGIELNTRLPLLLDEMLSSENAE HHHHHHHHHCCEEEEEEEEEECCCCEEECCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA