| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is phnI [H]
Identifier: 108810793
GI number: 108810793
Start: 740093
End: 741271
Strand: Reverse
Name: phnI [H]
Synonym: YPN_0628
Alternate gene names: 108810793
Gene position: 741271-740093 (Counterclockwise)
Preceding gene: 108810794
Following gene: 108810792
Centisome position: 16.35
GC content: 55.47
Gene sequence:
>1179_bases ATGTACGTTGCCGTGAAAGGGGGCGAAAAAGCCATTGCCGCCGCCCATCAATTACTGGAAAACCAGCGGCGGGGCGATAC TCAGATCCCGGCGATCGATTGTGAGCAAATTGAGCAGCAGTTAGGTTTAGCCGTTGATCGGGTGATGACCGAGGGCGGTA TCTATGATCGTGAATTGGCGGCGCTGGCCATTAAGCAGGCCAGTGGTGACCTGGTTGAAGCCATCTTTCTGTTGCGGGCT TACCGTACCACCTTGCCCCGTCTGGCGGTCAGTCTACCGCTGGCAACCGACACGATGCGCCTGGAACGGCGTATTTCGGC CATTTACAAAGATCTGCCCGGTGGGCAAGTGCTCGGCCCCACCTATGATTACACCCATCGGCTGTTGGATTTTACCCTGT TGGCCTCTGGCGAAACGCCGCTAGCCCCCCGTGGCGAAGAAGCCTTGCCAGAGCATTGCGCTCACGTATTTGATTTACTG ACCCAAGAGCAGTTAGCGCTGCCGGAGCAAGATGACGGCACTCCGCCAGATGATATCACCCGGAACCCGCCAGTTTATCC CTGTAATCGCTCGGCACGGCTACAACAATTGGTCAGAGGTGATGAAGGCTTTCTGCTGGCGCTGGGTTACTCCACCCAGC GCGGTTATGGCCGCACTCACCCGTTCGCCGCCGAGATCCGCACCGGTTACCTGACCATTGCCATTCAGCCAGAAGAACTG GGCTTTGCGATCGATATTGGTGAGATCCTGTTGACCGAATGCGAGATGGTCAATGGTTTTGTCGATCCGGTCTCAGAACC GCCCCATTTTACCCGGGGCTATGGCTTAGTTTTTGGCCGTGGTGAACGCAAAGCCATGTCGATAGCGCTGATGGATCGCA CCCTGCAAAGCCGTGAGTATCAGGAAGCGGTTTCCAGCCCGGCGCAGGATGAAGAGTTCGTGTTATCCCATGCCGATAAC GTTGAGGCCGCTGGTTTTGTCTCTCATCTGAAACTGCCCCATTACGTCGATTTCCAGGCGGAACTGGCACTGCTCAAACG CCTACGCAGTGAACATCTGGCCGCGTCATCCGCCCTTTTCACACCGCAATTATCGTCTTCTTCATTACCATCATCTTCAC AACCATCATCATCTTCACAACCACCATCTTCTCAACGACAGGAGCCACACCATGACTGA
Upstream 100 bases:
>100_bases TTAACCGGCCTGCCGTGTTCCCCGCCGGCCTTGATTTCCTGTTGACCTGTGGTGAGCACCTGATGGCTCTCCCACGGACC ACTCATGTGGAGGTGTGCTG
Downstream 100 bases:
>100_bases GGTTCTCACTGGCTACAACCTGGGTTATTTGGATGAGCAAACCAAGTGTACATTGCGCCGTGCCATACTGAAAGCCGTCG CAATCCCAGGCTATCAAGTG
Product: PhnI protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MYVAVKGGEKAIAAAHQLLENQRRGDTQIPAIDCEQIEQQLGLAVDRVMTEGGIYDRELAALAIKQASGDLVEAIFLLRA YRTTLPRLAVSLPLATDTMRLERRISAIYKDLPGGQVLGPTYDYTHRLLDFTLLASGETPLAPRGEEALPEHCAHVFDLL TQEQLALPEQDDGTPPDDITRNPPVYPCNRSARLQQLVRGDEGFLLALGYSTQRGYGRTHPFAAEIRTGYLTIAIQPEEL GFAIDIGEILLTECEMVNGFVDPVSEPPHFTRGYGLVFGRGERKAMSIALMDRTLQSREYQEAVSSPAQDEEFVLSHADN VEAAGFVSHLKLPHYVDFQAELALLKRLRSEHLAASSALFTPQLSSSSLPSSSQPSSSSQPPSSQRQEPHHD
Sequences:
>Translated_392_residues MYVAVKGGEKAIAAAHQLLENQRRGDTQIPAIDCEQIEQQLGLAVDRVMTEGGIYDRELAALAIKQASGDLVEAIFLLRA YRTTLPRLAVSLPLATDTMRLERRISAIYKDLPGGQVLGPTYDYTHRLLDFTLLASGETPLAPRGEEALPEHCAHVFDLL TQEQLALPEQDDGTPPDDITRNPPVYPCNRSARLQQLVRGDEGFLLALGYSTQRGYGRTHPFAAEIRTGYLTIAIQPEEL GFAIDIGEILLTECEMVNGFVDPVSEPPHFTRGYGLVFGRGERKAMSIALMDRTLQSREYQEAVSSPAQDEEFVLSHADN VEAAGFVSHLKLPHYVDFQAELALLKRLRSEHLAASSALFTPQLSSSSLPSSSQPSSSSQPPSSQRQEPHHD >Mature_392_residues MYVAVKGGEKAIAAAHQLLENQRRGDTQIPAIDCEQIEQQLGLAVDRVMTEGGIYDRELAALAIKQASGDLVEAIFLLRA YRTTLPRLAVSLPLATDTMRLERRISAIYKDLPGGQVLGPTYDYTHRLLDFTLLASGETPLAPRGEEALPEHCAHVFDLL TQEQLALPEQDDGTPPDDITRNPPVYPCNRSARLQQLVRGDEGFLLALGYSTQRGYGRTHPFAAEIRTGYLTIAIQPEEL GFAIDIGEILLTECEMVNGFVDPVSEPPHFTRGYGLVFGRGERKAMSIALMDRTLQSREYQEAVSSPAQDEEFVLSHADN VEAAGFVSHLKLPHYVDFQAELALLKRLRSEHLAASSALFTPQLSSSSLPSSSQPSSSSQPPSSQRQEPHHD
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3626
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnI family [H]
Homologues:
Organism=Escherichia coli, GI1790537, Length=353, Percent_Identity=74.5042492917847, Blast_Score=533, Evalue=1e-153,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008773 [H]
Pfam domain/function: PF05861 PhnI [H]
EC number: NA
Molecular weight: Translated: 43128; Mature: 43128
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVAVKGGEKAIAAAHQLLENQRRGDTQIPAIDCEQIEQQLGLAVDRVMTEGGIYDRELA CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH ALAIKQASGDLVEAIFLLRAYRTTLPRLAVSLPLATDTMRLERRISAIYKDLPGGQVLGP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEECC TYDYTHRLLDFTLLASGETPLAPRGEEALPEHCAHVFDLLTQEQLALPEQDDGTPPDDIT CHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RNPPVYPCNRSARLQQLVRGDEGFLLALGYSTQRGYGRTHPFAAEIRTGYLTIAIQPEEL CCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHEEECCEEEEEEEHHHC GFAIDIGEILLTECEMVNGFVDPVSEPPHFTRGYGLVFGRGERKAMSIALMDRTLQSREY CEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH QEAVSSPAQDEEFVLSHADNVEAAGFVSHLKLPHYVDFQAELALLKRLRSEHLAASSALF HHHHCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHCC TPQLSSSSLPSSSQPSSSSQPPSSQRQEPHHD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYVAVKGGEKAIAAAHQLLENQRRGDTQIPAIDCEQIEQQLGLAVDRVMTEGGIYDRELA CEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH ALAIKQASGDLVEAIFLLRAYRTTLPRLAVSLPLATDTMRLERRISAIYKDLPGGQVLGP HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEECC TYDYTHRLLDFTLLASGETPLAPRGEEALPEHCAHVFDLLTQEQLALPEQDDGTPPDDIT CHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC RNPPVYPCNRSARLQQLVRGDEGFLLALGYSTQRGYGRTHPFAAEIRTGYLTIAIQPEEL CCCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHEEECCEEEEEEEHHHC GFAIDIGEILLTECEMVNGFVDPVSEPPHFTRGYGLVFGRGERKAMSIALMDRTLQSREY CEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH QEAVSSPAQDEEFVLSHADNVEAAGFVSHLKLPHYVDFQAELALLKRLRSEHLAASSALF HHHHCCCCCCCHHHHHCCCCCCHHHHHHHCCCCCEECHHHHHHHHHHHHHHHHHHHHHCC TPQLSSSSLPSSSQPSSSSQPPSSQRQEPHHD CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]