Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108810779

Identifier: 108810779

GI number: 108810779

Start: 726384

End: 727607

Strand: Reverse

Name: 108810779

Synonym: YPN_0614

Alternate gene names: NA

Gene position: 727607-726384 (Counterclockwise)

Preceding gene: 108810787

Following gene: 108810778

Centisome position: 16.05

GC content: 44.36

Gene sequence:

>1224_bases
ATGATGCTAAACTCTGGTGCTAAAAACCTATTACTGACTATTCTGTTGGGTACATCTCCCTTTATTTATGCTGCAGAAAG
TCATCCGTTGTTATTAAAAATGGACGATATTAACTACAGCATTGAACAGATTAAACAAAACAACCCGTTATATGAAAAAT
CTTATAAAAATCTGATGGCTAAGGCCGACAAGGCACTAAAAAAACCACTGTACTCCGTCATGGATAAAAGCCTCTTGGCC
GCCAGTGGTGATAAACACGACTATTACAGCTTCCCACCTTATTGGTGGCCAGATCCAAGCAAGAAAGACGGTATGCCTTA
TTTACGTAAGGATGGGGAAACAAATCCTGCGGCCAACAGTGATGCCACCGATAAAAAGCGCATGAACAGCTTCAGTGAAG
ACGTCTATTATCTGGCGTTGGCTTATAGCTTTACCGGTAAGCCTGAGTATGCCCAAAAAGCGCATGAACAATTGGTCAAT
TGGTTCGTGAATCCAGAGACTAAAATGAATCCAAATCTGCAATATGCGCAGGCCATTCCGGGGATTAACGAAGGCCGAGG
TATTGGTTTGATCGATAGCCGGGCGCTAGTTGATGTGATTGATGCCGTTGAATTGATCAGACCCGCCAATGTTCTCAGTG
ACAACGACTATCAGGCCATTAAAAGTTGGTATGGTGATTTTTATCAATGGATGACCACCAGCCAAAATGGTTTCGAAGAA
GATAACTGGCACAATAACCACGGCACCTATTTTGATATGCAGGCGGCCTCTTTTGCCCTGTTCAGCGATCAAAAAGCCGC
TGCACAGAAACGTTTGGAAATCACGCAATTACGCCGTATTCCCTCACATTTTGATATGCAAGGCCGACAAAATGCCGAGC
TGGAGCGCACCCGCCCATGGCATTACAGTAACTTCCATCTAGAGGCCTACAATAAATTGGGCCGTCTTGGGGAGGTTGGC
GAGAAAGATATCTGGGATTTCAGTCTGGATGAGCACAGCCTGAAAAAAGGCTATCAGTACGTTGCCGGTTTCATCAATAC
CGACCAAGCCTGGCCGTATAAAGATCTGGATGGAGTACAGGATAAAAAAGCCTTGGTCAATATGATTACCGCCGCTCGCG
CCTACCCTGCTGACGTTGAATTCCAACAAAAAGCACAATACCTGATAGCAAAATACCCAGATACCGTTGAAATCTTACTT
TACCCAATCACAACGCAAAAATAA

Upstream 100 bases:

>100_bases
TTATAAATAAGCACAATTTTTATTTAAAAAATGAGTGTTCAATATATTAAATTAATAATTTTTTATTTACACCGTTTAAT
CCATAAAAATAAGGAAAGTG

Downstream 100 bases:

>100_bases
GCATCGCCGAGGACACGCCAGATATGAAGCAGTTTACGGATCGGCAGATGGTTAAAATCCGCCAGCGCGTTGTGAAACAA
CCGGAGATTATTGCCACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MMLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLMAKADKALKKPLYSVMDKSLLA
ASGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAANSDATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLVN
WFVNPETKMNPNLQYAQAIPGINEGRGIGLIDSRALVDVIDAVELIRPANVLSDNDYQAIKSWYGDFYQWMTTSQNGFEE
DNWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRPWHYSNFHLEAYNKLGRLGEVG
EKDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGVQDKKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEILL
YPITTQK

Sequences:

>Translated_407_residues
MMLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLMAKADKALKKPLYSVMDKSLLA
ASGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAANSDATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLVN
WFVNPETKMNPNLQYAQAIPGINEGRGIGLIDSRALVDVIDAVELIRPANVLSDNDYQAIKSWYGDFYQWMTTSQNGFEE
DNWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRPWHYSNFHLEAYNKLGRLGEVG
EKDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGVQDKKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEILL
YPITTQK
>Mature_407_residues
MMLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLMAKADKALKKPLYSVMDKSLLA
ASGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAANSDATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLVN
WFVNPETKMNPNLQYAQAIPGINEGRGIGLIDSRALVDVIDAVELIRPANVLSDNDYQAIKSWYGDFYQWMTTSQNGFEE
DNWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRPWHYSNFHLEAYNKLGRLGEVG
EKDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGVQDKKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEILL
YPITTQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46739; Mature: 46739

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLMA
CCCCCCCHHEEEEEEECCCCEEEEECCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHH
KADKALKKPLYSVMDKSLLAASGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAANS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
DATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLVNWFVNPETKMNPNLQYAQAIP
CCHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCC
GINEGRGIGLIDSRALVDVIDAVELIRPANVLSDNDYQAIKSWYGDFYQWMTTSQNGFEE
CCCCCCCCCEECCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
DNWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRPW
CCCCCCCCCEEEECHHHEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
HYSNFHLEAYNKLGRLGEVGEKDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGVQ
CCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
DKKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEILLYPITTQK
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCC
>Mature Secondary Structure
MMLNSGAKNLLLTILLGTSPFIYAAESHPLLLKMDDINYSIEQIKQNNPLYEKSYKNLMA
CCCCCCCHHEEEEEEECCCCEEEEECCCCEEEEECCCCCHHHHHHCCCCHHHHHHHHHHH
KADKALKKPLYSVMDKSLLAASGDKHDYYSFPPYWWPDPSKKDGMPYLRKDGETNPAANS
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC
DATDKKRMNSFSEDVYYLALAYSFTGKPEYAQKAHEQLVNWFVNPETKMNPNLQYAQAIP
CCHHHHHHHHHHHCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCC
GINEGRGIGLIDSRALVDVIDAVELIRPANVLSDNDYQAIKSWYGDFYQWMTTSQNGFEE
CCCCCCCCCEECCHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
DNWHNNHGTYFDMQAASFALFSDQKAAAQKRLEITQLRRIPSHFDMQGRQNAELERTRPW
CCCCCCCCCEEEECHHHEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
HYSNFHLEAYNKLGRLGEVGEKDIWDFSLDEHSLKKGYQYVAGFINTDQAWPYKDLDGVQ
CCCCEEHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
DKKALVNMITAARAYPADVEFQQKAQYLIAKYPDTVEILLYPITTQK
HHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA