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The map label for this gene is 108810725

Identifier: 108810725

GI number: 108810725

Start: 674839

End: 675417

Strand: Reverse

Name: 108810725

Synonym: YPN_0560

Alternate gene names: NA

Gene position: 675417-674839 (Counterclockwise)

Preceding gene: 108810727

Following gene: 108810723

Centisome position: 14.89

GC content: 47.84

Gene sequence:

>579_bases
ATGGATAAAATGAAAATAAAACGTGCTGCTGGACTGCCCCTGCTTCTAATACTCACCGCTTGCCAAACCTCCCCTTTACT
GCAGTCAGCGGAAATAAACAAGAGAGCCACTCAGGGAAAATGGAGTTTCACATTTGTTACCCCAGAGTCACAGCCTGCAC
AGGTGACCTACGCCCGTATAGTGGACACTGCAGATAACCTGCACCCGTTTAATACACGGGACATGACACAAAATAGCCCA
TCTCAAATGGGAGAGTCGGGTGAATTAATACACCAAACATCGATTCATTTTAATCAGACGAACTCCCCGCCTCAATCTAT
GGTGTTCTGCTGGAATTCGATTGCCGATAAAAAAGTGTACGAGACCCATCTGGTTCTCCCGCAGTCCGTCAGACAAAGTA
TGATCACACCCGCCAGAACAGGGAATACAACCCAATATAAAACGATGTTATTGGGCCTTTCTCCTGGCGGTAAAGTCCTT
GTCTGGTTACAGGACGAGGGAGGCCCGCAAAATAACCGCGTGCCAATCGTGAACATCAATACCCTCTCCGGCGATAAACT
GGCGATTTGCAAGAGCTGA

Upstream 100 bases:

>100_bases
ACGCTATAAACGCTATAAACGCTATAAACGCTATAAACGCTATAAACGCTATAATAGTAGGTAACAGTAATGATAAAGAA
CAATAACAACGACAACATGG

Downstream 100 bases:

>100_bases
CCTCGCAAGTACGGAAGAAGAGGGATCGCCACAGTAAGCGAGTATGAGATTACTGTGGCGATTTTATGGCCCTGTACCAG
ATTATAGCTAATCAGTTATC

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDKMKIKRAAGLPLLLILTACQTSPLLQSAEINKRATQGKWSFTFVTPESQPAQVTYARIVDTADNLHPFNTRDMTQNSP
SQMGESGELIHQTSIHFNQTNSPPQSMVFCWNSIADKKVYETHLVLPQSVRQSMITPARTGNTTQYKTMLLGLSPGGKVL
VWLQDEGGPQNNRVPIVNINTLSGDKLAICKS

Sequences:

>Translated_192_residues
MDKMKIKRAAGLPLLLILTACQTSPLLQSAEINKRATQGKWSFTFVTPESQPAQVTYARIVDTADNLHPFNTRDMTQNSP
SQMGESGELIHQTSIHFNQTNSPPQSMVFCWNSIADKKVYETHLVLPQSVRQSMITPARTGNTTQYKTMLLGLSPGGKVL
VWLQDEGGPQNNRVPIVNINTLSGDKLAICKS
>Mature_192_residues
MDKMKIKRAAGLPLLLILTACQTSPLLQSAEINKRATQGKWSFTFVTPESQPAQVTYARIVDTADNLHPFNTRDMTQNSP
SQMGESGELIHQTSIHFNQTNSPPQSMVFCWNSIADKKVYETHLVLPQSVRQSMITPARTGNTTQYKTMLLGLSPGGKVL
VWLQDEGGPQNNRVPIVNINTLSGDKLAICKS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21211; Mature: 21211

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKMKIKRAAGLPLLLILTACQTSPLLQSAEINKRATQGKWSFTFVTPESQPAQVTYARI
CCCCCCHHHCCCCCEEEEEHHCCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEE
VDTADNLHPFNTRDMTQNSPSQMGESGELIHQTSIHFNQTNSPPQSMVFCWNSIADKKVY
EECCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCCHHHEEEEHHHHCCCEEE
ETHLVLPQSVRQSMITPARTGNTTQYKTMLLGLSPGGKVLVWLQDEGGPQNNRVPIVNIN
HEEEECCHHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEE
TLSGDKLAICKS
ECCCCEEEEECC
>Mature Secondary Structure
MDKMKIKRAAGLPLLLILTACQTSPLLQSAEINKRATQGKWSFTFVTPESQPAQVTYARI
CCCCCCHHHCCCCCEEEEEHHCCCCCHHCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEE
VDTADNLHPFNTRDMTQNSPSQMGESGELIHQTSIHFNQTNSPPQSMVFCWNSIADKKVY
EECCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEEEEECCCCCCHHHEEEEHHHHCCCEEE
ETHLVLPQSVRQSMITPARTGNTTQYKTMLLGLSPGGKVLVWLQDEGGPQNNRVPIVNIN
HEEEECCHHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCEEEEEEE
TLSGDKLAICKS
ECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA