| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108810459
Identifier: 108810459
GI number: 108810459
Start: 362358
End: 362621
Strand: Reverse
Name: 108810459
Synonym: YPN_0293
Alternate gene names: NA
Gene position: 362621-362358 (Counterclockwise)
Preceding gene: 108810461
Following gene: 108810458
Centisome position: 8.0
GC content: 43.94
Gene sequence:
>264_bases ATGAGAAGACTGAACCCAACAAGTGAAATTGGGCAGCTAGAGACGTTAGCAACTCTACCTGAAAAATTGGCTGAGAGGGC AGCTCGCGCTCAAATATTCTCTCAAAACTGGCCTTCGGGTGATTTGGGGGCTGCAGTGAATAAGTTTGCAGGTAGCGATC TGTTTATTACAGTCACTAAATCAGGTAAACAAATTTATACGAATCCAACAACAGGGGTTCAGGTAGTTAGAGGATTTGTC AGGGAGTTATTTTCGCCTCCATGA
Upstream 100 bases:
>100_bases AAAACGGCTGAACAACTTGGCGGGGATGCTCCAGTTGGTTATGATCAGGTTATGGATAATAAAGGATTGCACCGGCGCAT CGATTGCTGCGGGGCTAACG
Downstream 100 bases:
>100_bases CCCATCGTTACCTAGAAAAAGAACATACCTCGACCTTGATGGAAATATTCCAAATAATAAAATTTTGGAGACAGGGAAAC AGGTTGGTAGAACGCAAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MRRLNPTSEIGQLETLATLPEKLAERAARAQIFSQNWPSGDLGAAVNKFAGSDLFITVTKSGKQIYTNPTTGVQVVRGFV RELFSPP
Sequences:
>Translated_87_residues MRRLNPTSEIGQLETLATLPEKLAERAARAQIFSQNWPSGDLGAAVNKFAGSDLFITVTKSGKQIYTNPTTGVQVVRGFV RELFSPP >Mature_87_residues MRRLNPTSEIGQLETLATLPEKLAERAARAQIFSQNWPSGDLGAAVNKFAGSDLFITVTKSGKQIYTNPTTGVQVVRGFV RELFSPP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9492; Mature: 9492
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLNPTSEIGQLETLATLPEKLAERAARAQIFSQNWPSGDLGAAVNKFAGSDLFITVTK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEC SGKQIYTNPTTGVQVVRGFVRELFSPP CCCEEEECCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRRLNPTSEIGQLETLATLPEKLAERAARAQIFSQNWPSGDLGAAVNKFAGSDLFITVTK CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEEC SGKQIYTNPTTGVQVVRGFVRELFSPP CCCEEEECCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA