| Definition | Yersinia pestis Nepal516, complete genome. |
|---|---|
| Accession | NC_008149 |
| Length | 4,534,590 |
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The map label for this gene is 108810431
Identifier: 108810431
GI number: 108810431
Start: 330443
End: 330730
Strand: Reverse
Name: 108810431
Synonym: YPN_0265
Alternate gene names: NA
Gene position: 330730-330443 (Counterclockwise)
Preceding gene: 108810434
Following gene: 108810423
Centisome position: 7.29
GC content: 53.82
Gene sequence:
>288_bases ATGTTAACTGAAGACACGGCAGAGGCCAAAGGCTGGCTGTCCAGCGGTCAGCTGCGGGAGGACGTCTTTACCCTGCTGCG TGTTTATCTGGGGTGTGATTACGATGCCAGCCTGACACTGACAATCCCGATGAATCTCGCACCGCTGCCACGTATGGGCG ACCCCTTGCTGATGGCGGGGTATAACGTGATGCTGGGACTGCGTGAAGATAATCTGGATGAAAGGCCGGAGAAAGTGACG ATGAAGTTGGGGCGGATTAGGGATAAGAGTAAACTTCAGAAGCACTAA
Upstream 100 bases:
>100_bases AAAACAGGCGAGATTCTCGTTTTCAGAGTAGTAAAGGCTGGGGGATCATCTGGTCCTCGGCAGCGAAACTTCAGATGCTA ACTACTTCATCGGGGTCGAA
Downstream 100 bases:
>100_bases AAAAATAACCAACTGATTTTATTTAATCAAGAGATATTAAGGAATACCGAATACTAAATAGCATTCTAGAATGTGAAAGT AAGTTCATTCTATAAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MLTEDTAEAKGWLSSGQLREDVFTLLRVYLGCDYDASLTLTIPMNLAPLPRMGDPLLMAGYNVMLGLREDNLDERPEKVT MKLGRIRDKSKLQKH
Sequences:
>Translated_95_residues MLTEDTAEAKGWLSSGQLREDVFTLLRVYLGCDYDASLTLTIPMNLAPLPRMGDPLLMAGYNVMLGLREDNLDERPEKVT MKLGRIRDKSKLQKH >Mature_95_residues MLTEDTAEAKGWLSSGQLREDVFTLLRVYLGCDYDASLTLTIPMNLAPLPRMGDPLLMAGYNVMLGLREDNLDERPEKVT MKLGRIRDKSKLQKH
Specific function: Unknown
COG id: COG3520
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10767; Mature: 10767
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTEDTAEAKGWLSSGQLREDVFTLLRVYLGCDYDASLTLTIPMNLAPLPRMGDPLLMAG CCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEC YNVMLGLREDNLDERPEKVTMKLGRIRDKSKLQKH CEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCC >Mature Secondary Structure MLTEDTAEAKGWLSSGQLREDVFTLLRVYLGCDYDASLTLTIPMNLAPLPRMGDPLLMAG CCCCCCCCHHCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCEEEEC YNVMLGLREDNLDERPEKVTMKLGRIRDKSKLQKH CEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA