Definition Yersinia pestis Nepal516, complete genome.
Accession NC_008149
Length 4,534,590

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The map label for this gene is 108810333

Identifier: 108810333

GI number: 108810333

Start: 209878

End: 210486

Strand: Reverse

Name: 108810333

Synonym: YPN_0167

Alternate gene names: NA

Gene position: 210486-209878 (Counterclockwise)

Preceding gene: 108810341

Following gene: 108810332

Centisome position: 4.64

GC content: 40.23

Gene sequence:

>609_bases
ATGTCGCGTAATTATTTAACACCCTCATTTTATATTACGCCACCAACATCAACCCTAATAAATCACAATGCCATTCCATT
TTGGATGGGTTTTTACATAAAGGACTATCAGGTATTTATGATGAAGAAAACTGTTATTGCTATTATCACTATGGCCACAT
TGACCAGCACTGCGGCTTATGCAAACACAATAGAGAAAGATATTCGTGTTGAAGCAGAAATTATTTCTCTCATGGACGTG
AAGAGAGCTGATGATAGCAATATTAATAAAATAAAATTAACCTATGACACGGTAACGAATGATGGTACGTATAGCCATTC
AGAAGCAATTAAAGTAAAAGCACGTAAACAACTCGGAGATAAGCTAAAAGTGTCTCTTGCCGCACCGGTTATCTTAAGCG
AGCCAAATAACAATAAAGAGTTTACTCACGTTGAAGTATTGTTAGATGGGAAGAAGCTGCTTGAGACGGCCGACACACGA
GACCTGATTGCCTTCCATGGCTCTGAGCTCAACGCAGAACTAAAAGTCAGCGCCAAAGAGCCTAATAATGCCGTCGGTGG
TGAAAAGTATAGCGGGGTAATTCAATTGCGCCTGGAGCCAAGCGCTTAA

Upstream 100 bases:

>100_bases
GGTGATATAAATTAAAATCATTCAGACAAAATGGTATAATTACCACTTGAAATAACGTTATTTGTCATGTTAGTGTTCGC
CCCGGTTTGTGACGGGCATA

Downstream 100 bases:

>100_bases
TTTAGTTTGTTTCAATACAGTTTGTTAATTTAATGAATACAGCCATGGAATTATCTCCTGGCTGTATATATCTGTCATAC
TTCAAGCTGCATGTGCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSRNYLTPSFYITPPTSTLINHNAIPFWMGFYIKDYQVFMMKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDV
KRADDSNINKIKLTYDTVTNDGTYSHSEAIKVKARKQLGDKLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADTR
DLIAFHGSELNAELKVSAKEPNNAVGGEKYSGVIQLRLEPSA

Sequences:

>Translated_202_residues
MSRNYLTPSFYITPPTSTLINHNAIPFWMGFYIKDYQVFMMKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDV
KRADDSNINKIKLTYDTVTNDGTYSHSEAIKVKARKQLGDKLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADTR
DLIAFHGSELNAELKVSAKEPNNAVGGEKYSGVIQLRLEPSA
>Mature_201_residues
SRNYLTPSFYITPPTSTLINHNAIPFWMGFYIKDYQVFMMKKTVIAIITMATLTSTAAYANTIEKDIRVEAEIISLMDVK
RADDSNINKIKLTYDTVTNDGTYSHSEAIKVKARKQLGDKLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADTRD
LIAFHGSELNAELKVSAKEPNNAVGGEKYSGVIQLRLEPSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22485; Mature: 22354

Theoretical pI: Translated: 7.80; Mature: 7.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRNYLTPSFYITPPTSTLINHNAIPFWMGFYIKDYQVFMMKKTVIAIITMATLTSTAAY
CCCCCCCCEEEECCCCHHHHCCCCCCEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHH
ANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVTNDGTYSHSEAIKVKARKQLGD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEHHHCCC
KLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADTRDLIAFHGSELNAELKVSAKE
EEEEEEECCEEEECCCCCCCEEEEEEEECCHHHHHCCCCCEEEEECCCCCCEEEEEEECC
PNNAVGGEKYSGVIQLRLEPSA
CCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
SRNYLTPSFYITPPTSTLINHNAIPFWMGFYIKDYQVFMMKKTVIAIITMATLTSTAAY
CCCCCCCEEEECCCCHHHHCCCCCCEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHH
ANTIEKDIRVEAEIISLMDVKRADDSNINKIKLTYDTVTNDGTYSHSEAIKVKARKQLGD
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEEEHHHCCC
KLKVSLAAPVILSEPNNNKEFTHVEVLLDGKKLLETADTRDLIAFHGSELNAELKVSAKE
EEEEEEECCEEEECCCCCCCEEEEEEEECCHHHHHCCCCCEEEEECCCCCCEEEEEEECC
PNNAVGGEKYSGVIQLRLEPSA
CCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA