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The map label for this gene is insJ [C]

Identifier: 108810205

GI number: 108810205

Start: 55664

End: 56308

Strand: Reverse

Name: insJ [C]

Synonym: YPN_0039

Alternate gene names: 108810205

Gene position: 56308-55664 (Counterclockwise)

Preceding gene: 108810206

Following gene: 108810204

Centisome position: 1.24

GC content: 49.15

Gene sequence:

>645_bases
ATGATGAATCGAGGGAACCCACGCAGTGGGCAAGCGATAGTGCGAAAGCGCGGGGTTCCAAGGGGGCCACGCTTTGCACT
GAACCCCAGATCTTGGATCTTTTTATCCATGATCTGGAGGTTCGGTTCAATGAAACACCCTTTTTCAACCCGCCTAGCGG
CGGTTCAACATTACCTTTCAGGAAAGGCCACTCTGCGGGAAACCGCACGTCAATTCAGTGTTGGCAAATCCCCTCTTACG
CGTTGGATCCGAGCTTTTCGCCGTCAAGGTGAGGCTGGACTGGAGCACCATCTTTCCAGAACTTATACTCCAGAATTCAG
GCTTTGCGTTGTCCGCTATATGATGGCAAACAGATGTAGCGCTGCCGATGCTTCTGCTCATTTTAACATTCCCAACGAGA
CGATTATCCAAAACTGGATGAAACGTTATCGAGAGGGAGGAAAAGAAGCGCTTAACCCATCGAAAACGGGTCCTACTATG
CCAAAAGATAAATATGAGCACGATTCAAAACCGTTCAGCGAGATGACGCATGCGGAGCTAGAGAAAGAACTTGAGTATCT
GCGCGCGGAAAACGCTTATCTAAAAAAGCGGAAAGCCCTGAGAGAAGAAAAGGCACTCAGGGAGCAGCAGAAAAAACCAG
AATAG

Upstream 100 bases:

>100_bases
ATTTGAGCAGCCGAGTGAAGAATGAAGGTAGGACGCGAGGCATGGATGCCGAGCGAGGGCCGCTTGAGCAGGAAGCGAAT
CGGCCCGGTCCGTCAGCGAA

Downstream 100 bases:

>100_bases
TTCAAGCACTGACAGCAGAACATCGACTTTCTTGCCTACTGTGTGCCGCAAAATTGGCACGCAGTACATACTATTATCAT
GCATCGAAACCGGACGGTGT

Product: insertion element IS1661 DNA-binding protein

Products: NA

Alternate protein names: ORFA [H]

Number of amino acids: Translated: 214; Mature: 214

Protein sequence:

>214_residues
MMNRGNPRSGQAIVRKRGVPRGPRFALNPRSWIFLSMIWRFGSMKHPFSTRLAAVQHYLSGKATLRETARQFSVGKSPLT
RWIRAFRRQGEAGLEHHLSRTYTPEFRLCVVRYMMANRCSAADASAHFNIPNETIIQNWMKRYREGGKEALNPSKTGPTM
PKDKYEHDSKPFSEMTHAELEKELEYLRAENAYLKKRKALREEKALREQQKKPE

Sequences:

>Translated_214_residues
MMNRGNPRSGQAIVRKRGVPRGPRFALNPRSWIFLSMIWRFGSMKHPFSTRLAAVQHYLSGKATLRETARQFSVGKSPLT
RWIRAFRRQGEAGLEHHLSRTYTPEFRLCVVRYMMANRCSAADASAHFNIPNETIIQNWMKRYREGGKEALNPSKTGPTM
PKDKYEHDSKPFSEMTHAELEKELEYLRAENAYLKKRKALREEKALREQQKKPE
>Mature_214_residues
MMNRGNPRSGQAIVRKRGVPRGPRFALNPRSWIFLSMIWRFGSMKHPFSTRLAAVQHYLSGKATLRETARQFSVGKSPLT
RWIRAFRRQGEAGLEHHLSRTYTPEFRLCVVRYMMANRCSAADASAHFNIPNETIIQNWMKRYREGGKEALNPSKTGPTM
PKDKYEHDSKPFSEMTHAELEKELEYLRAENAYLKKRKALREEKALREQQKKPE

Specific function: Unknown

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IS150/IS1296 orfA family [H]

Homologues:

Organism=Escherichia coli, GI1789980, Length=163, Percent_Identity=27.6073619631902, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24979; Mature: 24979

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNRGNPRSGQAIVRKRGVPRGPRFALNPRSWIFLSMIWRFGSMKHPFSTRLAAVQHYLS
CCCCCCCCCHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GKATLRETARQFSVGKSPLTRWIRAFRRQGEAGLEHHLSRTYTPEFRLCVVRYMMANRCS
CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
AADASAHFNIPNETIIQNWMKRYREGGKEALNPSKTGPTMPKDKYEHDSKPFSEMTHAEL
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
EKELEYLRAENAYLKKRKALREEKALREQQKKPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MMNRGNPRSGQAIVRKRGVPRGPRFALNPRSWIFLSMIWRFGSMKHPFSTRLAAVQHYLS
CCCCCCCCCHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
GKATLRETARQFSVGKSPLTRWIRAFRRQGEAGLEHHLSRTYTPEFRLCVVRYMMANRCS
CHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
AADASAHFNIPNETIIQNWMKRYREGGKEALNPSKTGPTMPKDKYEHDSKPFSEMTHAEL
CCCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
EKELEYLRAENAYLKKRKALREEKALREQQKKPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA