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The map label for this gene is 108810187

Identifier: 108810187

GI number: 108810187

Start: 36049

End: 36396

Strand: Reverse

Name: 108810187

Synonym: YPN_0021

Alternate gene names: NA

Gene position: 36396-36049 (Counterclockwise)

Preceding gene: 108810188

Following gene: 108810186

Centisome position: 0.8

GC content: 46.84

Gene sequence:

>348_bases
GTGCTGCCCGTCAATTTGACTCAGGGACAGAAAGAGCTGCGCCTGCAAATAAATTTGTTCGGTCAGTCTATTTCTCAATC
AGATATTATGATTAGAAAACGTACTGCGTTATGGCTTGTACTCAGTACTGGCGCTCAAGCCGAGACGCCTTTGGCCATAG
AGACCCCATCTTCCATTAATGAATCTCGCCAGTCACTACAAAATAATGCCAAAGAAATTAATCAGCTAGTAGAAGAAAAA
CGCCACCAACAGATCACACAACACAACACCGGACAAAGTGAATTATCTCGTCCGGCCCCCCCCCCCTGCACCGGTGTTAC
CCGAAGATACGCAGTGCCTACCCATTAA

Upstream 100 bases:

>100_bases
CAAAATTTATATTCATATTTCACTGTTATATTTTACTTCCTGCCAACAACTTAATTCCCGTTGTTTATCCGTCGTTCTCT
ATTGTTCAGGGACGGTAATT

Downstream 100 bases:

>100_bases
TGGCGTTTATATTCAGGGGATCACCTTATTAACAGAGGATGATTTAAGTGAATTAAGTGCGATCCCTGAACAATGTATTC
ATCCTGATAATATTAACCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MLPVNLTQGQKELRLQINLFGQSISQSDIMIRKRTALWLVLSTGAQAETPLAIETPSSINESRQSLQNNAKEINQLVEEK
RHQQITQHNTGQSELSRPAPPPCTGVTRRYAVPTH

Sequences:

>Translated_115_residues
MLPVNLTQGQKELRLQINLFGQSISQSDIMIRKRTALWLVLSTGAQAETPLAIETPSSINESRQSLQNNAKEINQLVEEK
RHQQITQHNTGQSELSRPAPPPCTGVTRRYAVPTH
>Mature_115_residues
MLPVNLTQGQKELRLQINLFGQSISQSDIMIRKRTALWLVLSTGAQAETPLAIETPSSINESRQSLQNNAKEINQLVEEK
RHQQITQHNTGQSELSRPAPPPCTGVTRRYAVPTH

Specific function: Unknown

COG id: COG2831

COG function: function code U; Hemolysin activation/secretion protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12867; Mature: 12867

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPVNLTQGQKELRLQINLFGQSISQSDIMIRKRTALWLVLSTGAQAETPLAIETPSSIN
CCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCEEEEEEECCCCCCCCEEEECCCHHH
ESRQSLQNNAKEINQLVEEKRHQQITQHNTGQSELSRPAPPPCTGVTRRYAVPTH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPVNLTQGQKELRLQINLFGQSISQSDIMIRKRTALWLVLSTGAQAETPLAIETPSSIN
CCCCCCCCCCCCEEEEEEECCCCCCCCCCEEEECCEEEEEEECCCCCCCCEEEECCCHHH
ESRQSLQNNAKEINQLVEEKRHQQITQHNTGQSELSRPAPPPCTGVTRRYAVPTH
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA