Click here to switch to the map view.

The map label for this gene is 108801976

Identifier: 108801976

GI number: 108801976

Start: 5313052

End: 5313612

Strand: Reverse

Name: 108801976

Synonym: Mmcs_5013

Alternate gene names: NA

Gene position: 5313612-5313052 (Counterclockwise)

Preceding gene: 108801977

Following gene: 108801975

Centisome position: 93.13

GC content: 72.19

Gene sequence:

>561_bases
GTGACCTGGTGGCCGCGATCCGCTGATCGGCGGGCGGTCGGCTCACCGGGGACCGCCCCGGGCAGCCGGTACCGTGGAAT
CGTGCAGCACACCCGACGGCGGATCCTCCCCACGCTGTTCGTGCTGTCCGCAGTCGTCCTGGTCGCCGCGTGCACGCTGA
CCGACAGCGTGCTCAACCGCGACGTCACCTCCACCGCGCAACCGCCGCCCGCGGCGCTACCGGACCAGTCCGCCGATCGC
GGGTCGGATCTGCCGACCCCGCCCGACGGCGCCGGTCAGCCGGGGGCGGTGACCGTGACCGGCCAGCAGCGGGGCTACCT
CGATGCCCTGAAGGCCGCCGGGGTGCGGGCGACGACCGATCTGCGCGCCCTGTCGATCGGCTCCGCGGTCTGTCAGGCGC
GTGCGGCCAAGCAGAGCGACCAGGGAGTGTGGGAGTTCATCCTGCCGCTCGTGCGCAGCGACGTGCGCGCGACGCGGCCC
AGTTCCATGCGAACCTCGGTGCGAGAGGTCGACTCCACGACGGCCGACTACATTCGCATCGCAACCGAACGACTCTGCTA
G

Upstream 100 bases:

>100_bases
CACTATCGCGCCGTCGGCGGCAGCAACGGGCACTTCGACTTCCCGTCCGGCGGTGAGCACGGCTGGGGCAGCTGGGCGCC
GCAACTGGGAGCCATGTCGG

Downstream 100 bases:

>100_bases
CGCAGACCCGCGTACGCGAGGAGCCGATTACCCCATGCCGAAAACCAGTCGACGCAAACGCCACCGCATCCTCGCCCTGG
CCGCCGCCGGGGCGATGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MTWWPRSADRRAVGSPGTAPGSRYRGIVQHTRRRILPTLFVLSAVVLVAACTLTDSVLNRDVTSTAQPPPAALPDQSADR
GSDLPTPPDGAGQPGAVTVTGQQRGYLDALKAAGVRATTDLRALSIGSAVCQARAAKQSDQGVWEFILPLVRSDVRATRP
SSMRTSVREVDSTTADYIRIATERLC

Sequences:

>Translated_186_residues
MTWWPRSADRRAVGSPGTAPGSRYRGIVQHTRRRILPTLFVLSAVVLVAACTLTDSVLNRDVTSTAQPPPAALPDQSADR
GSDLPTPPDGAGQPGAVTVTGQQRGYLDALKAAGVRATTDLRALSIGSAVCQARAAKQSDQGVWEFILPLVRSDVRATRP
SSMRTSVREVDSTTADYIRIATERLC
>Mature_185_residues
TWWPRSADRRAVGSPGTAPGSRYRGIVQHTRRRILPTLFVLSAVVLVAACTLTDSVLNRDVTSTAQPPPAALPDQSADRG
SDLPTPPDGAGQPGAVTVTGQQRGYLDALKAAGVRATTDLRALSIGSAVCQARAAKQSDQGVWEFILPLVRSDVRATRPS
SMRTSVREVDSTTADYIRIATERLC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19839; Mature: 19707

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWWPRSADRRAVGSPGTAPGSRYRGIVQHTRRRILPTLFVLSAVVLVAACTLTDSVLNR
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DVTSTAQPPPAALPDQSADRGSDLPTPPDGAGQPGAVTVTGQQRGYLDALKAAGVRATTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCHHH
LRALSIGSAVCQARAAKQSDQGVWEFILPLVRSDVRATRPSSMRTSVREVDSTTADYIRI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ATERLC
HHHHCC
>Mature Secondary Structure 
TWWPRSADRRAVGSPGTAPGSRYRGIVQHTRRRILPTLFVLSAVVLVAACTLTDSVLNR
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DVTSTAQPPPAALPDQSADRGSDLPTPPDGAGQPGAVTVTGQQRGYLDALKAAGVRATTD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHCCCCCHHH
LRALSIGSAVCQARAAKQSDQGVWEFILPLVRSDVRATRPSSMRTSVREVDSTTADYIRI
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ATERLC
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA