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The map label for this gene is ydfG [H]

Identifier: 108801960

GI number: 108801960

Start: 5282842

End: 5283312

Strand: Reverse

Name: ydfG [H]

Synonym: Mmcs_4997

Alternate gene names: 108801960

Gene position: 5283312-5282842 (Counterclockwise)

Preceding gene: 108801970

Following gene: 108801959

Centisome position: 92.6

GC content: 67.94

Gene sequence:

>471_bases
ATGACACAGACACTGGAAGCCGGAACCACCGACCGCATCAAGATGTTCAAGGCCGCACCGGAGCTCTACAGCGCGATGAT
GACGCTCTCGGAGGCGTCCATCAAGGACGTGGACCCCGTCATCGGCGAACTGATCAAGATCCGGGCGTCGCAGATCAACC
GCTGCGCCTTCTGCCTCGACATGCACACCCGCGATGCCCGCAAGGCCGGCGAGACCGAACAGCGGCTCGCGCTGGTGGCG
GCGTGGGAGGAGGCCGGCGATCTCTTCACCGAGCGTGAACGCGCCGCGCTGGCGCTCGCCGAGGCCATCACCGAGGTCGC
CGGGCGCGGGGCCGTCGGCGACGAGGTGTACCGGCGTGCCGCCGAGGTGTTCACCGACCGCGAGCTCGCCCAGGTGATCG
CGATGACGGTGACGATCAACGCCTGGAATCGGATCAACCTCGCCGCGCCGCAGCCGTTCCCGCGTCGTTGA

Upstream 100 bases:

>100_bases
GCGCAGGTCGAGGTGTAGGTCGCGCGTACCCGGATTGGCCCACGAAGTCACCCCTGAATTGAACCATCTACGTGGGCGTT
TCGAGGCTAGCGTTCGAGAT

Downstream 100 bases:

>100_bases
GACGCCTACGGTCACAGGTGTGCAGACCGGGTCCGGTGCGGAGATCACGTTCGACGGTGACGTCGTCGCCAAACTGCACC
GGCCCGGAACCGATCCGCGG

Product: alkylhydroperoxidase AhpD core

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MTQTLEAGTTDRIKMFKAAPELYSAMMTLSEASIKDVDPVIGELIKIRASQINRCAFCLDMHTRDARKAGETEQRLALVA
AWEEAGDLFTERERAALALAEAITEVAGRGAVGDEVYRRAAEVFTDRELAQVIAMTVTINAWNRINLAAPQPFPRR

Sequences:

>Translated_156_residues
MTQTLEAGTTDRIKMFKAAPELYSAMMTLSEASIKDVDPVIGELIKIRASQINRCAFCLDMHTRDARKAGETEQRLALVA
AWEEAGDLFTERERAALALAEAITEVAGRGAVGDEVYRRAAEVFTDRELAQVIAMTVTINAWNRINLAAPQPFPRR
>Mature_155_residues
TQTLEAGTTDRIKMFKAAPELYSAMMTLSEASIKDVDPVIGELIKIRASQINRCAFCLDMHTRDARKAGETEQRLALVAA
WEEAGDLFTERERAALALAEAITEVAGRGAVGDEVYRRAAEVFTDRELAQVIAMTVTINAWNRINLAAPQPFPRR

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004675
- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 17269; Mature: 17138

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQTLEAGTTDRIKMFKAAPELYSAMMTLSEASIKDVDPVIGELIKIRASQINRCAFCLD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MHTRDARKAGETEQRLALVAAWEEAGDLFTERERAALALAEAITEVAGRGAVGDEVYRRA
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AEVFTDRELAQVIAMTVTINAWNRINLAAPQPFPRR
HHHHHHHHHHHHHHHHHEECCCCEEEECCCCCCCCC
>Mature Secondary Structure 
TQTLEAGTTDRIKMFKAAPELYSAMMTLSEASIKDVDPVIGELIKIRASQINRCAFCLD
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
MHTRDARKAGETEQRLALVAAWEEAGDLFTERERAALALAEAITEVAGRGAVGDEVYRRA
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
AEVFTDRELAQVIAMTVTINAWNRINLAAPQPFPRR
HHHHHHHHHHHHHHHHHEECCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]