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The map label for this gene is 108801950

Identifier: 108801950

GI number: 108801950

Start: 5273665

End: 5274195

Strand: Reverse

Name: 108801950

Synonym: Mmcs_4987

Alternate gene names: NA

Gene position: 5274195-5273665 (Counterclockwise)

Preceding gene: 108801952

Following gene: 108801947

Centisome position: 92.44

GC content: 69.49

Gene sequence:

>531_bases
GTGCTCTACCATGAGCGGATGGAGGGGATGATTGGGGGGCGTACGGCGAGCGACATGCCGGGCCTCGACATCGCGGAGCA
GCGGTCCTGGCAAAATTTTCTGGACGCCGCGCTGAGGCTCTACGCGACTCTGAACAAGACGCTGGTCGAACAGCATCACC
TGACGCTCAACGACGTCCGCCTGCTCGACATGCTGGACAAGTCACCGACCGGGTCCGCCCGCATGGGGGATCTGGCGGAG
AAGCTGATGTCGCTGCCCAGCCGGGTGACGCGGCAGATCCGCCGGCTGGAGATGCAGGGTCTGGTGCGGCGGGGCGCCAG
CCCGGACGACGGTCGTGGCGTGCTGGCGTCGATCACCGACGAGGGCCGCAGCCAGGTCCGCGAGGCGATGGTCACCTACT
CCGAGGGTGTGCGTAACCACTTCCTCGGCCGGCTGTCCCGGCCCCAGATCGCGGCGATGGGGGAGAACTGCCGCCGGGTG
AGCGCCGCGATGCGCGCGGGCTCGGCGCCCGCCAGGCTCGGCCGCGTGTAG

Upstream 100 bases:

>100_bases
GTACTTCCGTCCAGATCAGCTTTGCCGGGGACTCCGCGACGATCGCTTGCATCAACAAAACCCTACTCCTGGGTTCAGTT
CGCTTCCCGGGGACGGCTTC

Downstream 100 bases:

>100_bases
CACCCACTACGCTGTTGCGCGGTGGCGTGGCAGAGCGGCCTAATGCACTCGCCTTGAAAGCGAGAGACGGCTAACACCGT
CCGGGGGTTCAAATCCCTCC

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; MarR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein MarR; MarR-Family Regulatory Protein; Transcriptional Regulator MarR Family Protein; MarR-Family Protein Transcriptional Regulator; Marr Family Transcriptional Regulator

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MLYHERMEGMIGGRTASDMPGLDIAEQRSWQNFLDAALRLYATLNKTLVEQHHLTLNDVRLLDMLDKSPTGSARMGDLAE
KLMSLPSRVTRQIRRLEMQGLVRRGASPDDGRGVLASITDEGRSQVREAMVTYSEGVRNHFLGRLSRPQIAAMGENCRRV
SAAMRAGSAPARLGRV

Sequences:

>Translated_176_residues
MLYHERMEGMIGGRTASDMPGLDIAEQRSWQNFLDAALRLYATLNKTLVEQHHLTLNDVRLLDMLDKSPTGSARMGDLAE
KLMSLPSRVTRQIRRLEMQGLVRRGASPDDGRGVLASITDEGRSQVREAMVTYSEGVRNHFLGRLSRPQIAAMGENCRRV
SAAMRAGSAPARLGRV
>Mature_176_residues
MLYHERMEGMIGGRTASDMPGLDIAEQRSWQNFLDAALRLYATLNKTLVEQHHLTLNDVRLLDMLDKSPTGSARMGDLAE
KLMSLPSRVTRQIRRLEMQGLVRRGASPDDGRGVLASITDEGRSQVREAMVTYSEGVRNHFLGRLSRPQIAAMGENCRRV
SAAMRAGSAPARLGRV

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19548; Mature: 19548

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLYHERMEGMIGGRTASDMPGLDIAEQRSWQNFLDAALRLYATLNKTLVEQHHLTLNDVR
CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LLDMLDKSPTGSARMGDLAEKLMSLPSRVTRQIRRLEMQGLVRRGASPDDGRGVLASITD
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHH
EGRSQVREAMVTYSEGVRNHFLGRLSRPQIAAMGENCRRVSAAMRAGSAPARLGRV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MLYHERMEGMIGGRTASDMPGLDIAEQRSWQNFLDAALRLYATLNKTLVEQHHLTLNDVR
CCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LLDMLDKSPTGSARMGDLAEKLMSLPSRVTRQIRRLEMQGLVRRGASPDDGRGVLASITD
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHH
EGRSQVREAMVTYSEGVRNHFLGRLSRPQIAAMGENCRRVSAAMRAGSAPARLGRV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA