| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801920
Identifier: 108801920
GI number: 108801920
Start: 5249944
End: 5250336
Strand: Reverse
Name: 108801920
Synonym: Mmcs_4957
Alternate gene names: NA
Gene position: 5250336-5249944 (Counterclockwise)
Preceding gene: 108801921
Following gene: 108801917
Centisome position: 92.02
GC content: 70.99
Gene sequence:
>393_bases GTGTCTGACCGCAATGTGCTCGGCGGCCCGCTGCAGGAATGCGGTACCGATCCGATGACCGGCTTCTACCGCGACGGCTG CTGTTCGACGGGCCCGGAAGACCTCGGCGCGCACACCATCTGCGCCGTCGTCACCGCCGAGTTCCTCGAGCATCAGCGCT CGATCGGCAACGACCTGTCGACGCCGCGGCCCGAATACCGGTTCCCCGGCCTGAATCCGGGCGACCGGTGGTGCGTCACG GCCACCAACTGGCTCCGCGCGCACCGGGACGGGTGCGGCGCGCCGGTGGTGCTCGCCGCCACCCACGAACGCACCCTCGA CGTGGTGCCGATCGATGCGCTCAACCAGCACGCGGTCGACGTCCCCGACGACCCGGGCGGCCTGGCTCAGTAG
Upstream 100 bases:
>100_bases CAACGCATCCCCAACCTCCAGGTGTTCGAAGCCCAGAAGCCGGTCCTCGCCCAAGCCCGCTGAGCCCCGATTATCGGCGG CGAAGCGCGATACTGACCGG
Downstream 100 bases:
>100_bases TAGAAGGCGGTGAAGTCGGGCAGCCAGCCGCCGCGCTGGCATCCCAGCGGCAACCCGTCCGGCGACTGCGCGACACCGGT GCTCCCGTCGCACGGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSDRNVLGGPLQECGTDPMTGFYRDGCCSTGPEDLGAHTICAVVTAEFLEHQRSIGNDLSTPRPEYRFPGLNPGDRWCVT ATNWLRAHRDGCGAPVVLAATHERTLDVVPIDALNQHAVDVPDDPGGLAQ
Sequences:
>Translated_130_residues MSDRNVLGGPLQECGTDPMTGFYRDGCCSTGPEDLGAHTICAVVTAEFLEHQRSIGNDLSTPRPEYRFPGLNPGDRWCVT ATNWLRAHRDGCGAPVVLAATHERTLDVVPIDALNQHAVDVPDDPGGLAQ >Mature_129_residues SDRNVLGGPLQECGTDPMTGFYRDGCCSTGPEDLGAHTICAVVTAEFLEHQRSIGNDLSTPRPEYRFPGLNPGDRWCVTA TNWLRAHRDGCGAPVVLAATHERTLDVVPIDALNQHAVDVPDDPGGLAQ
Specific function: Unknown
COG id: COG3651
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13954; Mature: 13822
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDRNVLGGPLQECGTDPMTGFYRDGCCSTGPEDLGAHTICAVVTAEFLEHQRSIGNDLS CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHCCCCC TPRPEYRFPGLNPGDRWCVTATNWLRAHRDGCGAPVVLAATHERTLDVVPIDALNQHAVD CCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCC VPDDPGGLAQ CCCCCCCCCC >Mature Secondary Structure SDRNVLGGPLQECGTDPMTGFYRDGCCSTGPEDLGAHTICAVVTAEFLEHQRSIGNDLS CCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHCHHHHHHHHHHHHHHHHHHHCCCCC TPRPEYRFPGLNPGDRWCVTATNWLRAHRDGCGAPVVLAATHERTLDVVPIDALNQHAVD CCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCCCCCEEEEECCCCEEEEEECCCCCCCCCC VPDDPGGLAQ CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA