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The map label for this gene is sufS [H]

Identifier: 108801841

GI number: 108801841

Start: 5167865

End: 5168992

Strand: Reverse

Name: sufS [H]

Synonym: Mmcs_4878

Alternate gene names: 108801841

Gene position: 5168992-5167865 (Counterclockwise)

Preceding gene: 108801842

Following gene: 108801836

Centisome position: 90.6

GC content: 73.85

Gene sequence:

>1128_bases
ATGACCGGGACGCTGGCCGAACGCTGGCGCGCGGCGCGCCCGAAACCGGCCGGGATCCACCTCGACAGCGGGGCGTGCTC
GCGGCAGGGTTTCGCGGCCATCGACGCCGCCGCACAACACGCCCGTCACGAAGCCGAGGTGGGCGGTTACGTCGCGGTCG
AGGCGGCCACACCCGTGCTCGACGCGGGCCGCGCCGCCGTCGCGGCGCTGACCGGGTTGGCGGCCACCGACGTCGTCTTC
ACCACCGGGTCCAACCACGCGCTGGACCTGTTGCTGCGCAGCTGGGACGGTGACCGTTCGGTGGCGTGTCTGGTCGGTGA
GTACGGGCCCAACCTCGCGATCATGGCGGCCAACGGATTTCAGGTTTCACCGCTGCCTGTCGACACGACCGGTCGGTTGC
ATGTCGACGCCGCAGCCGAGGCATTGGCGCGCGACCGGCCCGCCCTGGTGCACCTGACGCCGCTGGGCAGCCATCGCGGC
CTCGCCCAGCCGCTGGGCCCGTTCGCCGAGGTGTGCCGGGACCTCGGCCTGCCCCTCGTGGTGGACGCCGCCCAGGCCCT
CGGCCACCTCGACTGCGCGGTCGCACCCGATGCGATCTACGCGTCGTCGCGGAAGTGGCTGGCCGGGCCCCGCGGCGTCG
GGGTGCTGGCCGTCCGGCCCGAGTTCGCCGAGAGACTGCGGCCGGGCTTTCCGCCGTCGGAACCCGCAGCGCCACTGACC
GTGCTGCAGCAACTCGAGCACGGCGAGTCCAATGCTGCTGCGCGGGTGGGCTTCTCGGTCGCCATCGGCGAGCATCTGGC
GGCCGGGGTGCAGCAGGTGCGGACACGTCTCGCCGAGGTCGGCCGGCTGACCCGCGCGGCGATGGCCGATGTGCCCGGGT
GGCGGGTGGTCGAACCGGTCGACGAGCCGACGGCGATCACGACGCTGGAACCGACCGACGGCGCCGATCCGCACCGGGTG
CGGGCGTGGCTGATCGCCGAACGGCGCATCGTCACCACCGCATGCGATGCGCGGCGGGCGCCGCGCGAGCTGACGGTGCC
GGTGCTTCGGCTCTCACCGCACGTCGACGTCACCGCCGACGAACTCGGCCAGGCGGCGGCGGCACTGGCCGAGGCGGCGC
GCCTATGA

Upstream 100 bases:

>100_bases
CGCCCGACGACGTCGCCGCCGAACTCGCCGCCGCGGGCCTGCGCCGCACCCACTTCTGGACTGATCCGGCGGGCGATTTC
GGGCTGTCGCTGGCGGTCAA

Downstream 100 bases:

>100_bases
GTCGTGTTCGGGCTTGTGCGCGGTCAACAGGAACGCCGGGAACTTCACCCGGTTCTTCTCGTCCGGCCCATGGGGCAGCT
CGGCGGGCAGGTCCGGCATC

Product: class V aminotransferase

Products: NA

Alternate protein names: Selenocysteine beta-lyase; SCL; Selenocysteine lyase; Selenocysteine reductase [H]

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MTGTLAERWRAARPKPAGIHLDSGACSRQGFAAIDAAAQHARHEAEVGGYVAVEAATPVLDAGRAAVAALTGLAATDVVF
TTGSNHALDLLLRSWDGDRSVACLVGEYGPNLAIMAANGFQVSPLPVDTTGRLHVDAAAEALARDRPALVHLTPLGSHRG
LAQPLGPFAEVCRDLGLPLVVDAAQALGHLDCAVAPDAIYASSRKWLAGPRGVGVLAVRPEFAERLRPGFPPSEPAAPLT
VLQQLEHGESNAAARVGFSVAIGEHLAAGVQQVRTRLAEVGRLTRAAMADVPGWRVVEPVDEPTAITTLEPTDGADPHRV
RAWLIAERRIVTTACDARRAPRELTVPVLRLSPHVDVTADELGQAAAALAEAARL

Sequences:

>Translated_375_residues
MTGTLAERWRAARPKPAGIHLDSGACSRQGFAAIDAAAQHARHEAEVGGYVAVEAATPVLDAGRAAVAALTGLAATDVVF
TTGSNHALDLLLRSWDGDRSVACLVGEYGPNLAIMAANGFQVSPLPVDTTGRLHVDAAAEALARDRPALVHLTPLGSHRG
LAQPLGPFAEVCRDLGLPLVVDAAQALGHLDCAVAPDAIYASSRKWLAGPRGVGVLAVRPEFAERLRPGFPPSEPAAPLT
VLQQLEHGESNAAARVGFSVAIGEHLAAGVQQVRTRLAEVGRLTRAAMADVPGWRVVEPVDEPTAITTLEPTDGADPHRV
RAWLIAERRIVTTACDARRAPRELTVPVLRLSPHVDVTADELGQAAAALAEAARL
>Mature_374_residues
TGTLAERWRAARPKPAGIHLDSGACSRQGFAAIDAAAQHARHEAEVGGYVAVEAATPVLDAGRAAVAALTGLAATDVVFT
TGSNHALDLLLRSWDGDRSVACLVGEYGPNLAIMAANGFQVSPLPVDTTGRLHVDAAAEALARDRPALVHLTPLGSHRGL
AQPLGPFAEVCRDLGLPLVVDAAQALGHLDCAVAPDAIYASSRKWLAGPRGVGVLAVRPEFAERLRPGFPPSEPAAPLTV
LQQLEHGESNAAARVGFSVAIGEHLAAGVQQVRTRLAEVGRLTRAAMADVPGWRVVEPVDEPTAITTLEPTDGADPHRVR
AWLIAERRIVTTACDARRAPRELTVPVLRLSPHVDVTADELGQAAAALAEAARL

Specific function: Cysteine desulfurases mobilize the sulfur from L- cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under speci

COG id: COG0520

COG function: function code E; Selenocysteine lyase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. Csd subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000192
- InterPro:   IPR020578
- InterPro:   IPR010970
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00266 Aminotran_5 [H]

EC number: =2.8.1.7; =4.4.1.16 [H]

Molecular weight: Translated: 39178; Mature: 39047

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGTLAERWRAARPKPAGIHLDSGACSRQGFAAIDAAAQHARHEAEVGGYVAVEAATPVL
CCCCHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHH
DAGRAAVAALTGLAATDVVFTTGSNHALDLLLRSWDGDRSVACLVGEYGPNLAIMAANGF
HCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCE
QVSPLPVDTTGRLHVDAAAEALARDRPALVHLTPLGSHRGLAQPLGPFAEVCRDLGLPLV
EECCCCCCCCCCEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEE
VDAAQALGHLDCAVAPDAIYASSRKWLAGPRGVGVLAVRPEFAERLRPGFPPSEPAAPLT
EHHHHHHCCCCHHCCCCHHHHCCCCCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCCHHH
VLQQLEHGESNAAARVGFSVAIGEHLAAGVQQVRTRLAEVGRLTRAAMADVPGWRVVEPV
HHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
DEPTAITTLEPTDGADPHRVRAWLIAERRIVTTACDARRAPRELTVPVLRLSPHVDVTAD
CCCCEEEEECCCCCCCHHHHHEEEEECCEEEEEHHHHHCCCCCCCCEEEEECCCCCCCHH
ELGQAAAALAEAARL
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGTLAERWRAARPKPAGIHLDSGACSRQGFAAIDAAAQHARHEAEVGGYVAVEAATPVL
CCCHHHHHHCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHH
DAGRAAVAALTGLAATDVVFTTGSNHALDLLLRSWDGDRSVACLVGEYGPNLAIMAANGF
HCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEECCE
QVSPLPVDTTGRLHVDAAAEALARDRPALVHLTPLGSHRGLAQPLGPFAEVCRDLGLPLV
EECCCCCCCCCCEEEHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCEE
VDAAQALGHLDCAVAPDAIYASSRKWLAGPRGVGVLAVRPEFAERLRPGFPPSEPAAPLT
EHHHHHHCCCCHHCCCCHHHHCCCCCCCCCCCCEEEEECHHHHHHCCCCCCCCCCCCHHH
VLQQLEHGESNAAARVGFSVAIGEHLAAGVQQVRTRLAEVGRLTRAAMADVPGWRVVEPV
HHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
DEPTAITTLEPTDGADPHRVRAWLIAERRIVTTACDARRAPRELTVPVLRLSPHVDVTAD
CCCCEEEEECCCCCCCHHHHHEEEEECCEEEEEHHHHHCCCCCCCCEEEEECCCCCCCHH
ELGQAAAALAEAARL
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA