Click here to switch to the map view.

The map label for this gene is 108801767

Identifier: 108801767

GI number: 108801767

Start: 5087937

End: 5088725

Strand: Reverse

Name: 108801767

Synonym: Mmcs_4804

Alternate gene names: NA

Gene position: 5088725-5087937 (Counterclockwise)

Preceding gene: 108801768

Following gene: 108801766

Centisome position: 89.19

GC content: 73.13

Gene sequence:

>789_bases
ATGAGCGTCGCCGCCGTCGCGCTCGCGTTGGCGCTGCTGCTCAACCCCGTCGACGTGAGTCGGCGGTTGCACACCCCTGC
GCCGCGGCAGGCGCGCCGCGGACTGGTCCACGCGCTGACCGTGCCGGGCGCCCTGTCGGCGATCGTGCTGTGGTCGGTGA
CATCCGTCGGTGTGGTGCTGGCCGCTGCGGTGGCCGGCGCCACCGTAGCGGTACGGATCCGCAACCGGCGCAGAAGGATA
CGGCGTGACCGCGAGGCGGAGTCGTTGCAGTCTGCGCTCGAGGTCCTGGTGGGCGAACTCCGCGTGGGCGCACACCCGGT
CGCCGCGTTCGAGACCGCCGCCGGCGAGATCGACGGACAGGTGTCGGATTCCCTGCGGGCCGTCGCGGCGCGCGCCCGAC
TCGGCGCCGATGTCGCGGCGGGTCTGCACGACACCGGGAGGAAGTCTTCGCTCGCCTCGCAGTGGGACCGCATCGCGGTG
TGCTGGCAGCTGGCCCAGACCCACGGCCTGTCCATCGCCGCGCTGATGCAGACCGCGCAACGTGATATCGCCGAACGACA
ACGCTTTTCGTCGCGGGCGAGCGCCGGGATGGCCGGGGCGCGGGCGACCGCCGCGGTGCTGGCGGGGCTGCCCGTCCTCG
GCATCTGCCTCGGTCAGATGATCGGGGCCGACCCGGTGCGCCTCCTGCTGGGCGGCGGGGCGGGTGCCTGGCTGCTGCTG
ATCGGTGTGACGCTGTCCTGCGCGGGCCTGCTGTGGTCGGACCGCATCACCGCGGGTGTGACGACGTGA

Upstream 100 bases:

>100_bases
ACGACGGATGCGTCCGCGTGGTTCCGGCGTGGCAGATCGATCGTGGGTTCGACGCCGGTGCCGCGGATCTGCGCCGCCTG
GTGTCGTCGAGGAGGGCGCG

Downstream 100 bases:

>100_bases
GCGTGGCGGCGGCCCTGCTGGCCCTGGCGCTGCTGCTGACCGGCCGCGACGGCGGCGTGCGGATGGCCCGGTTGCGCACG
GCCGGGCGGCGGACCCCCGG

Product: type II secretion system protein

Products: NA

Alternate protein names: Conserved Membrane Protein; Type II Secretion System Protein F; Type II Secretion System Integral Membrane Subunit; Conserved Transmembrane Protein

Number of amino acids: Translated: 262; Mature: 261

Protein sequence:

>262_residues
MSVAAVALALALLLNPVDVSRRLHTPAPRQARRGLVHALTVPGALSAIVLWSVTSVGVVLAAAVAGATVAVRIRNRRRRI
RRDREAESLQSALEVLVGELRVGAHPVAAFETAAGEIDGQVSDSLRAVAARARLGADVAAGLHDTGRKSSLASQWDRIAV
CWQLAQTHGLSIAALMQTAQRDIAERQRFSSRASAGMAGARATAAVLAGLPVLGICLGQMIGADPVRLLLGGGAGAWLLL
IGVTLSCAGLLWSDRITAGVTT

Sequences:

>Translated_262_residues
MSVAAVALALALLLNPVDVSRRLHTPAPRQARRGLVHALTVPGALSAIVLWSVTSVGVVLAAAVAGATVAVRIRNRRRRI
RRDREAESLQSALEVLVGELRVGAHPVAAFETAAGEIDGQVSDSLRAVAARARLGADVAAGLHDTGRKSSLASQWDRIAV
CWQLAQTHGLSIAALMQTAQRDIAERQRFSSRASAGMAGARATAAVLAGLPVLGICLGQMIGADPVRLLLGGGAGAWLLL
IGVTLSCAGLLWSDRITAGVTT
>Mature_261_residues
SVAAVALALALLLNPVDVSRRLHTPAPRQARRGLVHALTVPGALSAIVLWSVTSVGVVLAAAVAGATVAVRIRNRRRRIR
RDREAESLQSALEVLVGELRVGAHPVAAFETAAGEIDGQVSDSLRAVAARARLGADVAAGLHDTGRKSSLASQWDRIAVC
WQLAQTHGLSIAALMQTAQRDIAERQRFSSRASAGMAGARATAAVLAGLPVLGICLGQMIGADPVRLLLGGGAGAWLLLI
GVTLSCAGLLWSDRITAGVTT

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27097; Mature: 26966

Theoretical pI: Translated: 11.96; Mature: 11.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAAVALALALLLNPVDVSRRLHTPAPRQARRGLVHALTVPGALSAIVLWSVTSVGVVL
CHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHH
AAAVAGATVAVRIRNRRRRIRRDREAESLQSALEVLVGELRVGAHPVAAFETAAGEIDGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCH
VSDSLRAVAARARLGADVAAGLHDTGRKSSLASQWDRIAVCWQLAQTHGLSIAALMQTAQ
HHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
RDIAERQRFSSRASAGMAGARATAAVLAGLPVLGICLGQMIGADPVRLLLGGGAGAWLLL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCHHHHHH
IGVTLSCAGLLWSDRITAGVTT
HHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SVAAVALALALLLNPVDVSRRLHTPAPRQARRGLVHALTVPGALSAIVLWSVTSVGVVL
HHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCHHHHHCCCHHHHHHHHHHHHHHHHHH
AAAVAGATVAVRIRNRRRRIRRDREAESLQSALEVLVGELRVGAHPVAAFETAAGEIDGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCH
VSDSLRAVAARARLGADVAAGLHDTGRKSSLASQWDRIAVCWQLAQTHGLSIAALMQTAQ
HHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
RDIAERQRFSSRASAGMAGARATAAVLAGLPVLGICLGQMIGADPVRLLLGGGAGAWLLL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCHHHHHH
IGVTLSCAGLLWSDRITAGVTT
HHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA