Definition Mycobacterium sp. MCS chromosome, complete genome.
Accession NC_008146
Length 5,705,448

Click here to switch to the map view.

The map label for this gene is 108801728

Identifier: 108801728

GI number: 108801728

Start: 5042557

End: 5043036

Strand: Reverse

Name: 108801728

Synonym: Mmcs_4765

Alternate gene names: NA

Gene position: 5043036-5042557 (Counterclockwise)

Preceding gene: 108801729

Following gene: 108801727

Centisome position: 88.39

GC content: 72.08

Gene sequence:

>480_bases
ATGGGGCCCACCCGGAAACGCGACCTGGCGGCCGCGGTGCTCATCGCAGGCATCGTCGGATATCTCGCCGCACTGCTGGC
CTACCCGCGGTACTTCCCGCCGATCAGCCTGTGGACCGGACTCTCGCTGCTCGGCGTCGCCGTCGCGATCGCGGCGTGGG
GTGTCAACGTGCGCAACAAGATCCGCGACGGCGAGATCGGCGACGGTCCCGGCCGGCTGCATCCGCTCGCGGTGGCCCGC
TCGGTCGTCATCGCGAAGGCGTCGGCATGGGTGGGCGCCCCGGTCCTCGGCTGGTGGGCGGGGGTCCTGGTGCAGATCCT
GCCGCAGCGCGGCGCATTGCGGGCGGCCGGTGAGGACGTCCCGGGTGTGGTGATCGCAGCGGCCAGCGCGCTGGCGCTGA
CGATCGCCGGTCTGTGGCTGCAGAATTGCTGCAAGTCGCCGCCCGAACCGCCCGAGGATCCCGACCCGTCGTCGGACTGA

Upstream 100 bases:

>100_bases
CACGGCCGGTCTCGCTGTGGCTGGAGGAACTCGACTACGCCGAGCGCGCGGGTGTGCGGCGCACCGACCTGGCCCTGCGC
ACGGAGATCGCGGCCGACTG

Downstream 100 bases:

>100_bases
ACGCCTCCGCTACGCAGGTGGTGGAATCGCCGCGCGGGTCGACACGCTCGATGACCTGTGGCGGGTACAGTCGGCCCATG
ACTGTCCTGCCCCGCGGTCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MGPTRKRDLAAAVLIAGIVGYLAALLAYPRYFPPISLWTGLSLLGVAVAIAAWGVNVRNKIRDGEIGDGPGRLHPLAVAR
SVVIAKASAWVGAPVLGWWAGVLVQILPQRGALRAAGEDVPGVVIAAASALALTIAGLWLQNCCKSPPEPPEDPDPSSD

Sequences:

>Translated_159_residues
MGPTRKRDLAAAVLIAGIVGYLAALLAYPRYFPPISLWTGLSLLGVAVAIAAWGVNVRNKIRDGEIGDGPGRLHPLAVAR
SVVIAKASAWVGAPVLGWWAGVLVQILPQRGALRAAGEDVPGVVIAAASALALTIAGLWLQNCCKSPPEPPEDPDPSSD
>Mature_158_residues
GPTRKRDLAAAVLIAGIVGYLAALLAYPRYFPPISLWTGLSLLGVAVAIAAWGVNVRNKIRDGEIGDGPGRLHPLAVARS
VVIAKASAWVGAPVLGWWAGVLVQILPQRGALRAAGEDVPGVVIAAASALALTIAGLWLQNCCKSPPEPPEDPDPSSD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16427; Mature: 16296

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGPTRKRDLAAAVLIAGIVGYLAALLAYPRYFPPISLWTGLSLLGVAVAIAAWGVNVRNK
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
IRDGEIGDGPGRLHPLAVARSVVIAKASAWVGAPVLGWWAGVLVQILPQRGALRAAGEDV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PGVVIAAASALALTIAGLWLQNCCKSPPEPPEDPDPSSD
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GPTRKRDLAAAVLIAGIVGYLAALLAYPRYFPPISLWTGLSLLGVAVAIAAWGVNVRNK
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHH
IRDGEIGDGPGRLHPLAVARSVVIAKASAWVGAPVLGWWAGVLVQILPQRGALRAAGEDV
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PGVVIAAASALALTIAGLWLQNCCKSPPEPPEDPDPSSD
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA