| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is fabG [H]
Identifier: 108801655
GI number: 108801655
Start: 4971153
End: 4971944
Strand: Reverse
Name: fabG [H]
Synonym: Mmcs_4692
Alternate gene names: 108801655
Gene position: 4971944-4971153 (Counterclockwise)
Preceding gene: 108801656
Following gene: 108801654
Centisome position: 87.14
GC content: 68.06
Gene sequence:
>792_bases ATGAGCGATCTTTCCGTCGCGCCGAAGGAGATCGATGGCCACGGTCTCCTGGCGGGCAAGGTCGTACTCGTGACCGCCGC CGCCGGCACCGGCATCGGGTCGACGACGGCGCGGCGTGCGCTACTCGAAGGCGCCGACGTCGTCATCTCCGACTACCACG AGCGCCGCCTGAACGAGACCCGGGACCAGCTCACCGAACTCGGGCTCGGGAAGGTCGACGCGGTGGTGTGCGATGTCACG TCCACCGAAGCCGTCGACGCCCTCATCACCTCCACCGTCGAAAAGGCCGGACGGCTCGACGTTCTCGTCAACAACGCCGG CCTCGGCGGTCAGACACCGGTGGTCGACATGACCGACGACGAGTGGGACCGCGTCATGAACGTCACCCTCACCTCCGTCA TGCGCGCCACCCGCGCCGCGCTGCGCTACTTCCGCGACGCCGAGCACGGCGGCGTGATCGTCAACAACGCCAGCGTCCTG GGTTGGCGCGCACAGCATTCGCAGTCGCACTACGCCGCGGCCAAGGCCGGCGTCATGGCTCTCACCCGGTGCAGTGCGAT CGAGGCCGTCGAGTACGGGGTGCGCATCAACGCCGTCTCGCCCAGCATCGCCCGGCACAAATTCCTGGAGAAGACGAGTT CGTCGGATCTGCTCGACCGGCTCGCCGAGGGTGAGGCGTTCGGCCGCGCGGCCGAACCGTGGGAGGTGGCGGCCACCATC GCCTTCCTCGCCAGCGACTACTCGAGTTACCTGACCGGCGAGGTCATCTCGGTTTCGAGCCAGCACCCGTGA
Upstream 100 bases:
>100_bases ACCTGTTCTCGCGCGCCGACACCATCTACGGCGGCTCGAACGAGGTGCAGCGCAACATCATCGCCGAGCGCGTGCTCGGC CTACCGAGGGAGTCAAAAGG
Downstream 100 bases:
>100_bases GCACCTCCGCAGCCGGCCAGCCGCCGACCCGTCGCGACGAGCTCCTCGAGCTCGCCGCGACGATGTTCGCCGAGCGCGGG CTGCGGGCCACCACGGTGCG
Product: short chain dehydrogenase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MSDLSVAPKEIDGHGLLAGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLNETRDQLTELGLGKVDAVVCDVT STEAVDALITSTVEKAGRLDVLVNNAGLGGQTPVVDMTDDEWDRVMNVTLTSVMRATRAALRYFRDAEHGGVIVNNASVL GWRAQHSQSHYAAAKAGVMALTRCSAIEAVEYGVRINAVSPSIARHKFLEKTSSSDLLDRLAEGEAFGRAAEPWEVAATI AFLASDYSSYLTGEVISVSSQHP
Sequences:
>Translated_263_residues MSDLSVAPKEIDGHGLLAGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLNETRDQLTELGLGKVDAVVCDVT STEAVDALITSTVEKAGRLDVLVNNAGLGGQTPVVDMTDDEWDRVMNVTLTSVMRATRAALRYFRDAEHGGVIVNNASVL GWRAQHSQSHYAAAKAGVMALTRCSAIEAVEYGVRINAVSPSIARHKFLEKTSSSDLLDRLAEGEAFGRAAEPWEVAATI AFLASDYSSYLTGEVISVSSQHP >Mature_262_residues SDLSVAPKEIDGHGLLAGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLNETRDQLTELGLGKVDAVVCDVTS TEAVDALITSTVEKAGRLDVLVNNAGLGGQTPVVDMTDDEWDRVMNVTLTSVMRATRAALRYFRDAEHGGVIVNNASVLG WRAQHSQSHYAAAKAGVMALTRCSAIEAVEYGVRINAVSPSIARHKFLEKTSSSDLLDRLAEGEAFGRAAEPWEVAATIA FLASDYSSYLTGEVISVSSQHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Homo sapiens, GI19923817, Length=259, Percent_Identity=30.1158301158301, Blast_Score=103, Evalue=1e-22, Organism=Homo sapiens, GI32483357, Length=253, Percent_Identity=29.2490118577075, Blast_Score=102, Evalue=3e-22, Organism=Homo sapiens, GI15277342, Length=244, Percent_Identity=31.9672131147541, Blast_Score=99, Evalue=3e-21, Organism=Homo sapiens, GI31542939, Length=210, Percent_Identity=31.4285714285714, Blast_Score=97, Evalue=1e-20, Organism=Homo sapiens, GI5031737, Length=254, Percent_Identity=29.1338582677165, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI10190704, Length=252, Percent_Identity=29.3650793650794, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI59889578, Length=217, Percent_Identity=31.3364055299539, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI66933014, Length=254, Percent_Identity=30.3149606299213, Blast_Score=84, Evalue=2e-16, Organism=Homo sapiens, GI7705925, Length=248, Percent_Identity=31.0483870967742, Blast_Score=83, Evalue=2e-16, Organism=Homo sapiens, GI224922801, Length=171, Percent_Identity=32.7485380116959, Blast_Score=82, Evalue=5e-16, Organism=Homo sapiens, GI33667109, Length=202, Percent_Identity=29.7029702970297, Blast_Score=80, Evalue=1e-15, Organism=Homo sapiens, GI40254992, Length=186, Percent_Identity=30.1075268817204, Blast_Score=79, Evalue=3e-15, Organism=Homo sapiens, GI4503301, Length=219, Percent_Identity=26.4840182648402, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI4504505, Length=208, Percent_Identity=28.3653846153846, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI126723750, Length=256, Percent_Identity=25.78125, Blast_Score=75, Evalue=6e-14, Organism=Homo sapiens, GI4758504, Length=250, Percent_Identity=28.4, Blast_Score=70, Evalue=1e-12, Organism=Homo sapiens, GI40254986, Length=217, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI126723191, Length=190, Percent_Identity=27.8947368421053, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI87082100, Length=249, Percent_Identity=36.9477911646586, Blast_Score=119, Evalue=3e-28, Organism=Escherichia coli, GI1789208, Length=247, Percent_Identity=32.3886639676113, Blast_Score=117, Evalue=8e-28, Organism=Escherichia coli, GI1787335, Length=241, Percent_Identity=31.9502074688797, Blast_Score=114, Evalue=8e-27, Organism=Escherichia coli, GI1787905, Length=243, Percent_Identity=29.2181069958848, Blast_Score=97, Evalue=8e-22, Organism=Escherichia coli, GI1790717, Length=252, Percent_Identity=28.5714285714286, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1788459, Length=239, Percent_Identity=27.6150627615063, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI87082160, Length=243, Percent_Identity=25.1028806584362, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI2367175, Length=248, Percent_Identity=29.4354838709677, Blast_Score=80, Evalue=1e-16, Organism=Escherichia coli, GI1789378, Length=250, Percent_Identity=26.4, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI1786812, Length=251, Percent_Identity=29.0836653386454, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI2367365, Length=250, Percent_Identity=28.4, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1789057, Length=255, Percent_Identity=25.8823529411765, Blast_Score=63, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17560150, Length=254, Percent_Identity=34.251968503937, Blast_Score=126, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17562990, Length=254, Percent_Identity=33.8582677165354, Blast_Score=124, Evalue=6e-29, Organism=Caenorhabditis elegans, GI17562906, Length=256, Percent_Identity=35.546875, Blast_Score=123, Evalue=9e-29, Organism=Caenorhabditis elegans, GI71994604, Length=253, Percent_Identity=33.201581027668, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17561402, Length=251, Percent_Identity=31.4741035856574, Blast_Score=121, Evalue=4e-28, Organism=Caenorhabditis elegans, GI17562908, Length=256, Percent_Identity=34.765625, Blast_Score=120, Evalue=6e-28, Organism=Caenorhabditis elegans, GI25147288, Length=245, Percent_Identity=31.4285714285714, Blast_Score=117, Evalue=7e-27, Organism=Caenorhabditis elegans, GI17559104, Length=258, Percent_Identity=32.9457364341085, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17562904, Length=258, Percent_Identity=32.9457364341085, Blast_Score=114, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17560332, Length=255, Percent_Identity=35.2941176470588, Blast_Score=113, Evalue=1e-25, Organism=Caenorhabditis elegans, GI193204405, Length=258, Percent_Identity=32.5581395348837, Blast_Score=110, Evalue=6e-25, Organism=Caenorhabditis elegans, GI71994600, Length=195, Percent_Identity=34.3589743589744, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17538480, Length=259, Percent_Identity=30.5019305019305, Blast_Score=108, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17538486, Length=255, Percent_Identity=32.156862745098, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17531453, Length=259, Percent_Identity=34.3629343629344, Blast_Score=108, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17555706, Length=244, Percent_Identity=30.7377049180328, Blast_Score=104, Evalue=5e-23, Organism=Caenorhabditis elegans, GI17551412, Length=257, Percent_Identity=31.5175097276265, Blast_Score=103, Evalue=8e-23, Organism=Caenorhabditis elegans, GI17560220, Length=256, Percent_Identity=32.03125, Blast_Score=103, Evalue=9e-23, Organism=Caenorhabditis elegans, GI17562910, Length=262, Percent_Identity=29.7709923664122, Blast_Score=103, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17563726, Length=254, Percent_Identity=29.9212598425197, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI72000259, Length=255, Percent_Identity=30.5882352941176, Blast_Score=95, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17565030, Length=258, Percent_Identity=31.3953488372093, Blast_Score=94, Evalue=7e-20, Organism=Caenorhabditis elegans, GI17544670, Length=249, Percent_Identity=30.9236947791165, Blast_Score=94, Evalue=8e-20, Organism=Caenorhabditis elegans, GI17568967, Length=208, Percent_Identity=27.8846153846154, Blast_Score=89, Evalue=2e-18, Organism=Caenorhabditis elegans, GI17560676, Length=252, Percent_Identity=26.1904761904762, Blast_Score=88, Evalue=4e-18, Organism=Caenorhabditis elegans, GI17536025, Length=261, Percent_Identity=28.735632183908, Blast_Score=81, Evalue=5e-16, Organism=Caenorhabditis elegans, GI17536651, Length=264, Percent_Identity=28.4090909090909, Blast_Score=76, Evalue=1e-14, Organism=Caenorhabditis elegans, GI115534694, Length=245, Percent_Identity=29.3877551020408, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI17564282, Length=186, Percent_Identity=29.0322580645161, Blast_Score=69, Evalue=3e-12, Organism=Caenorhabditis elegans, GI17508651, Length=248, Percent_Identity=27.0161290322581, Blast_Score=64, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6322861, Length=215, Percent_Identity=29.3023255813954, Blast_Score=89, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6324126, Length=257, Percent_Identity=25.6809338521401, Blast_Score=75, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323882, Length=203, Percent_Identity=30.0492610837438, Blast_Score=69, Evalue=8e-13, Organism=Drosophila melanogaster, GI21357041, Length=239, Percent_Identity=35.1464435146443, Blast_Score=120, Evalue=1e-27, Organism=Drosophila melanogaster, GI23397609, Length=247, Percent_Identity=33.1983805668016, Blast_Score=117, Evalue=8e-27, Organism=Drosophila melanogaster, GI28571526, Length=239, Percent_Identity=34.7280334728033, Blast_Score=117, Evalue=9e-27, Organism=Drosophila melanogaster, GI24639444, Length=247, Percent_Identity=31.9838056680162, Blast_Score=111, Evalue=5e-25, Organism=Drosophila melanogaster, GI24644339, Length=248, Percent_Identity=33.0645161290323, Blast_Score=110, Evalue=8e-25, Organism=Drosophila melanogaster, GI21355319, Length=250, Percent_Identity=31.2, Blast_Score=106, Evalue=1e-23, Organism=Drosophila melanogaster, GI24644337, Length=254, Percent_Identity=30.7086614173228, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24643142, Length=245, Percent_Identity=29.3877551020408, Blast_Score=83, Evalue=2e-16, Organism=Drosophila melanogaster, GI17737361, Length=255, Percent_Identity=29.8039215686275, Blast_Score=82, Evalue=3e-16, Organism=Drosophila melanogaster, GI18859837, Length=253, Percent_Identity=26.8774703557312, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI24641232, Length=213, Percent_Identity=28.169014084507, Blast_Score=73, Evalue=2e-13, Organism=Drosophila melanogaster, GI24665243, Length=223, Percent_Identity=29.5964125560538, Blast_Score=67, Evalue=9e-12, Organism=Drosophila melanogaster, GI221331218, Length=223, Percent_Identity=29.5964125560538, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI21357673, Length=201, Percent_Identity=25.8706467661692, Blast_Score=65, Evalue=5e-11, Organism=Drosophila melanogaster, GI116007236, Length=193, Percent_Identity=25.9067357512953, Blast_Score=64, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 27912; Mature: 27780
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDLSVAPKEIDGHGLLAGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLNET CCCCCCCCCCCCCCCEEECEEEEEEEECCCCCCHHHHHHHHHCCCHHEEHHHHHHHHHHH RDQLTELGLGKVDAVVCDVTSTEAVDALITSTVEKAGRLDVLVNNAGLGGQTPVVDMTDD HHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEECCCC EWDRVMNVTLTSVMRATRAALRYFRDAEHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEHHCCCCHHHHHHHHHHH LTRCSAIEAVEYGVRINAVSPSIARHKFLEKTSSSDLLDRLAEGEAFGRAAEPWEVAATI HHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCHHCCCCCCCHHHHHHH AFLASDYSSYLTGEVISVSSQHP HHHHHHHHHHHCCCEEECCCCCC >Mature Secondary Structure SDLSVAPKEIDGHGLLAGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLNET CCCCCCCCCCCCCCEEECEEEEEEEECCCCCCHHHHHHHHHCCCHHEEHHHHHHHHHHH RDQLTELGLGKVDAVVCDVTSTEAVDALITSTVEKAGRLDVLVNNAGLGGQTPVVDMTDD HHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEECCCC EWDRVMNVTLTSVMRATRAALRYFRDAEHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCEEEEEEHHCCCCHHHHHHHHHHH LTRCSAIEAVEYGVRINAVSPSIARHKFLEKTSSSDLLDRLAEGEAFGRAAEPWEVAATI HHHHHHHHHHHHCEEEECCCCHHHHHHHHHHCCCHHHHHHHHCCHHCCCCCCCHHHHHHH AFLASDYSSYLTGEVISVSSQHP HHHHHHHHHHHCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10360571 [H]