| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801608
Identifier: 108801608
GI number: 108801608
Start: 4920676
End: 4921827
Strand: Reverse
Name: 108801608
Synonym: Mmcs_4645
Alternate gene names: NA
Gene position: 4921827-4920676 (Counterclockwise)
Preceding gene: 108801609
Following gene: 108801607
Centisome position: 86.27
GC content: 64.5
Gene sequence:
>1152_bases ATGAGTCCGGGCGGACGTACCGACGTGGGCACCGTCGAGGATCTGCACGCCTCGGCCGTGAAGGCCTGCGGTTTGGACGA TTTCGGCTCCGATGACGACAACTACCGGGAGGCGCTCGGCGTACTGCTCGAGTCCTACCGGCGTGACGCCGACCTGACCG AGTTCGGCAGCAAGATGCAGCGCTTCTTCGTCCGTAACGCGCTCGTTGCCCGTCTGGTCTCCGAGGCGGCGTTCAAGCAG TATCCCGAACACGCCGCCGTCGCGATCGAACGGCCGATTTTCGTCACCGGATTGCCGCGCACCGGCACGACGGCTGTGCA CCGGCTGCTCGCCGCGGACCCGCGCCACCAGGGCCTGGAGTTGTGGCTGGCCGAGTTCCCACAACCCCGCCCACCGCGCG AGACATGGTCGGACAACCCCGTCTTCCGGCAACTTGACGCGCAGTTCACCAAGGCGCATGAGGAGAACCCGGACTACACG GGCCTGCACTTCATGACCGCCGACGAGGTGGAGGAGTGCTGGCAGCTGTTACGGCAGTCGCTGCACTCGGTGTCCTACGA GACGCTGGCCCACGTGCCTACATACTCGCAGTGGCTGGCGCGTCAGGACTGGACCAAACCGTATCAGCGGCACCGCCGCA ATCTGCAGCTCATCGGGCTCAACGATCGCGAAAAGCGTTGGGTGCTCAAGAATCCCAGCCACCTGTTCGCGTTGGACGCG CTGTTCGCGACGTATCCGGACGCGCTCGTGGTGCAATGCCACCGGCCGGCCGAGACGATCATGGCATCGATGTGCTCACT CGCCCAGCACACCACCGAGGGCTGGTCGAACACGTTCGTCGGCGATGTCATCGGCGCCGACTCGATGGAGACGTGGTCGC GCGGTCTCGAACTGTTCAATGCCGAACGCGCCAAACATGATCCGGCGCAGTTCTACGATCTGGACTACTTCGCGCTGATC AAGGATCCGATCAGCGTCGTCGAGGACATCTACCGGACATTCGGCATCGAGTTCACCGACGGGGCCCGGGAGGCCATGGC CAGGACGCACGAGGAAAGCCAGCGGGGCCCTCGTGCACCCAAACACACCTACTCGCTGGCCGATTACGGTTTGACCGCCG AACAGGTCAAGGAGCGCTTCGCGGGTCTGTGA
Upstream 100 bases:
>100_bases CCGAGGACGAGGTGGCCTCGGCGATCCTGTTCATGGCCAGCGATCTGTCCAGCGGTATCACCGGGCAGACTCTGGATGTC AACTGCGGGGAGTACAAGGC
Downstream 100 bases:
>100_bases CCCGACGCTCGAATCACGCCGCCGGCTGACGGCGGCTTTCGCCGGAGCGGTCATCTCCGACCGATCCATCACCGCGTGAC CCGCCGGGTCGCGCGGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MSPGGRTDVGTVEDLHASAVKACGLDDFGSDDDNYREALGVLLESYRRDADLTEFGSKMQRFFVRNALVARLVSEAAFKQ YPEHAAVAIERPIFVTGLPRTGTTAVHRLLAADPRHQGLELWLAEFPQPRPPRETWSDNPVFRQLDAQFTKAHEENPDYT GLHFMTADEVEECWQLLRQSLHSVSYETLAHVPTYSQWLARQDWTKPYQRHRRNLQLIGLNDREKRWVLKNPSHLFALDA LFATYPDALVVQCHRPAETIMASMCSLAQHTTEGWSNTFVGDVIGADSMETWSRGLELFNAERAKHDPAQFYDLDYFALI KDPISVVEDIYRTFGIEFTDGAREAMARTHEESQRGPRAPKHTYSLADYGLTAEQVKERFAGL
Sequences:
>Translated_383_residues MSPGGRTDVGTVEDLHASAVKACGLDDFGSDDDNYREALGVLLESYRRDADLTEFGSKMQRFFVRNALVARLVSEAAFKQ YPEHAAVAIERPIFVTGLPRTGTTAVHRLLAADPRHQGLELWLAEFPQPRPPRETWSDNPVFRQLDAQFTKAHEENPDYT GLHFMTADEVEECWQLLRQSLHSVSYETLAHVPTYSQWLARQDWTKPYQRHRRNLQLIGLNDREKRWVLKNPSHLFALDA LFATYPDALVVQCHRPAETIMASMCSLAQHTTEGWSNTFVGDVIGADSMETWSRGLELFNAERAKHDPAQFYDLDYFALI KDPISVVEDIYRTFGIEFTDGAREAMARTHEESQRGPRAPKHTYSLADYGLTAEQVKERFAGL >Mature_382_residues SPGGRTDVGTVEDLHASAVKACGLDDFGSDDDNYREALGVLLESYRRDADLTEFGSKMQRFFVRNALVARLVSEAAFKQY PEHAAVAIERPIFVTGLPRTGTTAVHRLLAADPRHQGLELWLAEFPQPRPPRETWSDNPVFRQLDAQFTKAHEENPDYTG LHFMTADEVEECWQLLRQSLHSVSYETLAHVPTYSQWLARQDWTKPYQRHRRNLQLIGLNDREKRWVLKNPSHLFALDAL FATYPDALVVQCHRPAETIMASMCSLAQHTTEGWSNTFVGDVIGADSMETWSRGLELFNAERAKHDPAQFYDLDYFALIK DPISVVEDIYRTFGIEFTDGAREAMARTHEESQRGPRAPKHTYSLADYGLTAEQVKERFAGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43605; Mature: 43474
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPGGRTDVGTVEDLHASAVKACGLDDFGSDDDNYREALGVLLESYRRDADLTEFGSKMQ CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH RFFVRNALVARLVSEAAFKQYPEHAAVAIERPIFVTGLPRTGTTAVHRLLAADPRHQGLE HHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCEEEECCCCCCHHHHHHHHHCCCCCCCHH LWLAEFPQPRPPRETWSDNPVFRQLDAQFTKAHEENPDYTGLHFMTADEVEECWQLLRQS HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHH LHSVSYETLAHVPTYSQWLARQDWTKPYQRHRRNLQLIGLNDREKRWVLKNPSHLFALDA HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCEEECCCCHHHHHHH LFATYPDALVVQCHRPAETIMASMCSLAQHTTEGWSNTFVGDVIGADSMETWSRGLELFN HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHH AERAKHDPAQFYDLDYFALIKDPISVVEDIYRTFGIEFTDGAREAMARTHEESQRGPRAP HHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC KHTYSLADYGLTAEQVKERFAGL CHHHHHHHHCCCHHHHHHHHCCC >Mature Secondary Structure SPGGRTDVGTVEDLHASAVKACGLDDFGSDDDNYREALGVLLESYRRDADLTEFGSKMQ CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHH RFFVRNALVARLVSEAAFKQYPEHAAVAIERPIFVTGLPRTGTTAVHRLLAADPRHQGLE HHHHHHHHHHHHHHHHHHHHCCCHHHHEECCCEEEECCCCCCHHHHHHHHHCCCCCCCHH LWLAEFPQPRPPRETWSDNPVFRQLDAQFTKAHEENPDYTGLHFMTADEVEECWQLLRQS HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECHHHHHHHHHHHHHH LHSVSYETLAHVPTYSQWLARQDWTKPYQRHRRNLQLIGLNDREKRWVLKNPSHLFALDA HHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHCCCEEEEECCCCCCCEEECCCCHHHHHHH LFATYPDALVVQCHRPAETIMASMCSLAQHTTEGWSNTFVGDVIGADSMETWSRGLELFN HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHH AERAKHDPAQFYDLDYFALIKDPISVVEDIYRTFGIEFTDGAREAMARTHEESQRGPRAP HHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCC KHTYSLADYGLTAEQVKERFAGL CHHHHHHHHCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA