| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801580
Identifier: 108801580
GI number: 108801580
Start: 4890261
End: 4891463
Strand: Reverse
Name: 108801580
Synonym: Mmcs_4617
Alternate gene names: NA
Gene position: 4891463-4890261 (Counterclockwise)
Preceding gene: 108801581
Following gene: 108801579
Centisome position: 85.73
GC content: 64.92
Gene sequence:
>1203_bases GTGGCAGACATCGACGCGAAGCGCAGTCACGTACGCATCGCCGCCGCGATCATGGCTGCGATCGTCGCCGCCGCCGCGGT GTTCACCTATCTGTCGTACACCGCGGCATTCACCTCGACCGACACCGTCACCGTGGTCTCACCGCGCGCCGGCCTGGTCA TGGAGACCGAGGCGAAGGTGAAATACCGCGGCATCCAGATCGGCGAGGTCAAGGAGATCGAGTACGCAGGAGACCGGGCG AAGTTGACCCTGGCCATCCGTAGCGACGAGATGAAGTACATCCCCGCCAACGCGCCCGTGCGCATCGCGGGCACAACGGT GTTCGGCGCCAAGTCGGTCGAGTTCATCCCGCCGGAGAACGCGCAGCAGACGTCGTTGCGACCCGGGGCCGAGGTGCAGG CCTCCAACGTCCAGCTCGAGGTCAACACGTTGTTCCAGACCCTGACCGACGTGCTCGGCAAGATCGACCCGATCAACCTC AACGCCACGCTCAGCGCTCTGGGGGAGGGTTTGCGCGGCAACGGCGACGACATGGGCGCGCTGCTGGAGGGCCTCAACTA CTACGTGGGTCAGCTCAACCCGAAACTGCCCACGCTGCAGGAGGATCTGCGCAAGGCCGGTGTGGTGGCCAACATCTACG GCGACGCAGGACCGGGCATCGCGCGAATCCTCGACAACGCCCCGACCATCAGCAACACGATCGTCGATCAGCAACACAAC CTGAACACGACGCTGCTGGCCGCCACGGGTCTGGCGAACAACGGCACGGCCACGTTGGAACCGGCCGCCGACAACTACAT CGCCGCGATCCAGCGGTTGCGGGCGCCGCTCAAGGTGGCCGGCGAGTACTCGCCGGAATATGGCTGCATGCTGAAAGGCA CCGCCCGAGCGATCGAGAGGTTCGCACCGATCATCGGCGGTATCCGGCCGGGCCTGTTCGTGTCGTCGAACTTCCTGCCC GGGTCGCCTGCGTACACGTTTCCCGAGAGCCTTCCCATCGTCAACGCCACCGGCGGTCCGAACTGCCGGGGGCTACCTGA TCTGCCGAGTAAACAATATGGCGGCTCGTGGTACCACACCCCGTTCGTGGTCACCGACAACGCCTATGTGCCGTACCAGC CGAACACCGAGGTGCAGTTCGACGCTCCGTCGACGGCGCAGTTCCTGTTCAACGGCGCGTTCGCGGAAAAGGACGAGTAC TGA
Upstream 100 bases:
>100_bases GGCGGTGCGGACGTCGCTGATCGTGGTCGTCACCATCACCCTGTTCATCTCGCTCGCCGTCTACGGCGCCTCCGGCAACT TCAATCTGTCGGGCTAGGGG
Downstream 100 bases:
>100_bases TGAGCGCTTGCGCGAAGAAGCGAGAGCACTGATGAAGCGCGAAGGAAACCTGCTCAACGTCGGCATCTTCACGGTGGCGA TGCTGCTCGTGGCCGCGATG
Product: virulence factor MCE-like protein
Products: NA
Alternate protein names: Mce Family Protein; Secreted Protein; MCE-Family A; Virulence Factor; Mce Family A; MCE Family Protein; MCE-Family Protein; Cell Invasion Protein; Virulence Factor MCE-Like Protein; Mce-Related Protein; MCE-Family
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MADIDAKRSHVRIAAAIMAAIVAAAAVFTYLSYTAAFTSTDTVTVVSPRAGLVMETEAKVKYRGIQIGEVKEIEYAGDRA KLTLAIRSDEMKYIPANAPVRIAGTTVFGAKSVEFIPPENAQQTSLRPGAEVQASNVQLEVNTLFQTLTDVLGKIDPINL NATLSALGEGLRGNGDDMGALLEGLNYYVGQLNPKLPTLQEDLRKAGVVANIYGDAGPGIARILDNAPTISNTIVDQQHN LNTTLLAATGLANNGTATLEPAADNYIAAIQRLRAPLKVAGEYSPEYGCMLKGTARAIERFAPIIGGIRPGLFVSSNFLP GSPAYTFPESLPIVNATGGPNCRGLPDLPSKQYGGSWYHTPFVVTDNAYVPYQPNTEVQFDAPSTAQFLFNGAFAEKDEY
Sequences:
>Translated_400_residues MADIDAKRSHVRIAAAIMAAIVAAAAVFTYLSYTAAFTSTDTVTVVSPRAGLVMETEAKVKYRGIQIGEVKEIEYAGDRA KLTLAIRSDEMKYIPANAPVRIAGTTVFGAKSVEFIPPENAQQTSLRPGAEVQASNVQLEVNTLFQTLTDVLGKIDPINL NATLSALGEGLRGNGDDMGALLEGLNYYVGQLNPKLPTLQEDLRKAGVVANIYGDAGPGIARILDNAPTISNTIVDQQHN LNTTLLAATGLANNGTATLEPAADNYIAAIQRLRAPLKVAGEYSPEYGCMLKGTARAIERFAPIIGGIRPGLFVSSNFLP GSPAYTFPESLPIVNATGGPNCRGLPDLPSKQYGGSWYHTPFVVTDNAYVPYQPNTEVQFDAPSTAQFLFNGAFAEKDEY >Mature_399_residues ADIDAKRSHVRIAAAIMAAIVAAAAVFTYLSYTAAFTSTDTVTVVSPRAGLVMETEAKVKYRGIQIGEVKEIEYAGDRAK LTLAIRSDEMKYIPANAPVRIAGTTVFGAKSVEFIPPENAQQTSLRPGAEVQASNVQLEVNTLFQTLTDVLGKIDPINLN ATLSALGEGLRGNGDDMGALLEGLNYYVGQLNPKLPTLQEDLRKAGVVANIYGDAGPGIARILDNAPTISNTIVDQQHNL NTTLLAATGLANNGTATLEPAADNYIAAIQRLRAPLKVAGEYSPEYGCMLKGTARAIERFAPIIGGIRPGLFVSSNFLPG SPAYTFPESLPIVNATGGPNCRGLPDLPSKQYGGSWYHTPFVVTDNAYVPYQPNTEVQFDAPSTAQFLFNGAFAEKDEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42619; Mature: 42488
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIDAKRSHVRIAAAIMAAIVAAAAVFTYLSYTAAFTSTDTVTVVSPRAGLVMETEAKV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCEEEEECCCE KYRGIQIGEVKEIEYAGDRAKLTLAIRSDEMKYIPANAPVRIAGTTVFGAKSVEFIPPEN EEECEEECCEEEEEECCCCEEEEEEEECCCEEEECCCCCEEEEEEEEECCCCEEECCCCC AQQTSLRPGAEVQASNVQLEVNTLFQTLTDVLGKIDPINLNATLSALGEGLRGNGDDMGA CCCCCCCCCCCEEECCEEEEHHHHHHHHHHHHHCCCCCCCCEEHHHHCCCCCCCCCHHHH LLEGLNYYVGQLNPKLPTLQEDLRKAGVVANIYGDAGPGIARILDNAPTISNTIVDQQHN HHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCCCCHHHHHCCCCCCHHHHHCCCCC LNTTLLAATGLANNGTATLEPAADNYIAAIQRLRAPLKVAGEYSPEYGCMLKGTARAIER CCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHCCCCEECCCCCCCCCEEECHHHHHHHH FAPIIGGIRPGLFVSSNFLPGSPAYTFPESLPIVNATGGPNCRGLPDLPSKQYGGSWYHT HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEC PFVVTDNAYVPYQPNTEVQFDAPSTAQFLFNGAFAEKDEY CEEEECCEEECCCCCCCEEECCCCHHHHHCCCCCCCCCCC >Mature Secondary Structure ADIDAKRSHVRIAAAIMAAIVAAAAVFTYLSYTAAFTSTDTVTVVSPRAGLVMETEAKV CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEECCCCCEEEEECCCE KYRGIQIGEVKEIEYAGDRAKLTLAIRSDEMKYIPANAPVRIAGTTVFGAKSVEFIPPEN EEECEEECCEEEEEECCCCEEEEEEEECCCEEEECCCCCEEEEEEEEECCCCEEECCCCC AQQTSLRPGAEVQASNVQLEVNTLFQTLTDVLGKIDPINLNATLSALGEGLRGNGDDMGA CCCCCCCCCCCEEECCEEEEHHHHHHHHHHHHHCCCCCCCCEEHHHHCCCCCCCCCHHHH LLEGLNYYVGQLNPKLPTLQEDLRKAGVVANIYGDAGPGIARILDNAPTISNTIVDQQHN HHHHHHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCCCCHHHHHCCCCCCHHHHHCCCCC LNTTLLAATGLANNGTATLEPAADNYIAAIQRLRAPLKVAGEYSPEYGCMLKGTARAIER CCEEEEEEECCCCCCCEEECCCCCHHHHHHHHHCCCCEECCCCCCCCCEEECHHHHHHHH FAPIIGGIRPGLFVSSNFLPGSPAYTFPESLPIVNATGGPNCRGLPDLPSKQYGGSWYHT HHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEC PFVVTDNAYVPYQPNTEVQFDAPSTAQFLFNGAFAEKDEY CEEEECCEEECCCCCCCEEECCCCHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA