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The map label for this gene is 108801466

Identifier: 108801466

GI number: 108801466

Start: 4779878

End: 4780864

Strand: Reverse

Name: 108801466

Synonym: Mmcs_4503

Alternate gene names: NA

Gene position: 4780864-4779878 (Counterclockwise)

Preceding gene: 108801468

Following gene: 108801464

Centisome position: 83.79

GC content: 71.23

Gene sequence:

>987_bases
ATGTCACTGAGCGTCGCCGTCACCGGTCCCACCGGGGACATCGGGATCTCGGTCATCGAGGCCCTCGAGGACCATCCCGA
CGTCGGAGAGATCATCGGGATGGCCCGGCGCCCGTTCGACCCCGCGGGGCGGGGCTGGACCAAGACGACGTACCGGCGGG
GCGACATCCTCGACCGCGAGGCGGTGGACGCGCTCGTCGCCGACGCGGACGTGGTGGTGCACCTGGCCTTCGTCATCATG
GGTTCGCGGGAGGAGAGCGCCCGCGTCAACCTGGCCGGCACCCGCAACGTGTTCGAGGCGACGGTCGCCGCGTCGCGGCC
GCGCCGACTCGTCTACACCTCGTCGGTCGCCGCGTACGGGTACCACTCCGACAACCCGGTGCCGATCACCGAGGACGTGC
CCGCGCGCGGTTCGGCCGAGCACTACTACTCCGAACAGAAGGCGGCGTGCGAGGCGGCCCTCGCCGAGGCCACCGAGGGG
TCCGCACTCGAGGTGTATGTGCTGCGGCCGTGCATCGTGGTGGGTCCGAAGGCCCCGGCGCTCGCCGAGGTCATGCCGTG
GAATCAACTGCCCGGCCCGGTGCGCCGGGTGACGCAGGCGCTGCCGTTGCTCAAGCCACCGTTCCCCGACCCGGGCACAC
CACTGCAACTGGTGCACCACGACGACGTCGCGTCGGCCATCGTCCTCGCGGTCACGACCACCTCCGCGCCGCCCGGGGCC
TACAACATCGCCGGCGACGGGGTGCTGTCGATGTCCGATGTCGCCGAGGCGCTGGGCGCCCGGCCGGTGCGGGTGCCGAG
GCTGGCGGCGGTGGCCACCTCGGAGGTCGTGGCGCGGCTGCCGTTCGTGCCGTCGCTGCTGGAGTGGTTGCACGCCGGCC
GCACCTCCGTGGTGATGGACACCGGAAAAGCCAGGGAGCAACTCGGATGGACACCGAGATACAGTGGCGCCGAGGCGCTT
TCGTCGTTGGCGAAAGCCTTCCACTAG

Upstream 100 bases:

>100_bases
CTTCATCGCGGGTCCCTTCGGGGTTCGTGGATCTCCTTTGTATGCCCACTGCGGGGCCCGGGCAACGTTTTGCCTGTCGA
GGACAGGGAACTTCTCGGAG

Downstream 100 bases:

>100_bases
TCGCCGGTGTCGGCGGGTCCGCTCGGGGTGGCGCCACCCTCGCTCGACCAGTCGACGCGGTCATCGGCGCCTTCGGCCGG
GTCGCTGATGACGTCGTCCT

Product: NAD-dependent epimerase/dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MSLSVAVTGPTGDIGISVIEALEDHPDVGEIIGMARRPFDPAGRGWTKTTYRRGDILDREAVDALVADADVVVHLAFVIM
GSREESARVNLAGTRNVFEATVAASRPRRLVYTSSVAAYGYHSDNPVPITEDVPARGSAEHYYSEQKAACEAALAEATEG
SALEVYVLRPCIVVGPKAPALAEVMPWNQLPGPVRRVTQALPLLKPPFPDPGTPLQLVHHDDVASAIVLAVTTTSAPPGA
YNIAGDGVLSMSDVAEALGARPVRVPRLAAVATSEVVARLPFVPSLLEWLHAGRTSVVMDTGKAREQLGWTPRYSGAEAL
SSLAKAFH

Sequences:

>Translated_328_residues
MSLSVAVTGPTGDIGISVIEALEDHPDVGEIIGMARRPFDPAGRGWTKTTYRRGDILDREAVDALVADADVVVHLAFVIM
GSREESARVNLAGTRNVFEATVAASRPRRLVYTSSVAAYGYHSDNPVPITEDVPARGSAEHYYSEQKAACEAALAEATEG
SALEVYVLRPCIVVGPKAPALAEVMPWNQLPGPVRRVTQALPLLKPPFPDPGTPLQLVHHDDVASAIVLAVTTTSAPPGA
YNIAGDGVLSMSDVAEALGARPVRVPRLAAVATSEVVARLPFVPSLLEWLHAGRTSVVMDTGKAREQLGWTPRYSGAEAL
SSLAKAFH
>Mature_327_residues
SLSVAVTGPTGDIGISVIEALEDHPDVGEIIGMARRPFDPAGRGWTKTTYRRGDILDREAVDALVADADVVVHLAFVIMG
SREESARVNLAGTRNVFEATVAASRPRRLVYTSSVAAYGYHSDNPVPITEDVPARGSAEHYYSEQKAACEAALAEATEGS
ALEVYVLRPCIVVGPKAPALAEVMPWNQLPGPVRRVTQALPLLKPPFPDPGTPLQLVHHDDVASAIVLAVTTTSAPPGAY
NIAGDGVLSMSDVAEALGARPVRVPRLAAVATSEVVARLPFVPSLLEWLHAGRTSVVMDTGKAREQLGWTPRYSGAEALS
SLAKAFH

Specific function: Putative nucleotide sugar epimerase/dehydrogenase [H]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34737; Mature: 34606

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLSVAVTGPTGDIGISVIEALEDHPDVGEIIGMARRPFDPAGRGWTKTTYRRGDILDRE
CCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
AVDALVADADVVVHLAFVIMGSREESARVNLAGTRNVFEATVAASRPRRLVYTSSVAAYG
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCEEEEECCEEEEC
YHSDNPVPITEDVPARGSAEHYYSEQKAACEAALAEATEGSALEVYVLRPCIVVGPKAPA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCH
LAEVMPWNQLPGPVRRVTQALPLLKPPFPDPGTPLQLVHHDDVASAIVLAVTTTSAPPGA
HHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHCEEEEEEEECCCCCCC
YNIAGDGVLSMSDVAEALGARPVRVPRLAAVATSEVVARLPFVPSLLEWLHAGRTSVVMD
EECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEE
TGKAREQLGWTPRYSGAEALSSLAKAFH
CCHHHHHCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SLSVAVTGPTGDIGISVIEALEDHPDVGEIIGMARRPFDPAGRGWTKTTYRRGDILDRE
CEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHH
AVDALVADADVVVHLAFVIMGSREESARVNLAGTRNVFEATVAASRPRRLVYTSSVAAYG
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCEEEEECCEEEEC
YHSDNPVPITEDVPARGSAEHYYSEQKAACEAALAEATEGSALEVYVLRPCIVVGPKAPA
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCEEEECCCCCH
LAEVMPWNQLPGPVRRVTQALPLLKPPFPDPGTPLQLVHHDDVASAIVLAVTTTSAPPGA
HHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHCEEEEEEEECCCCCCC
YNIAGDGVLSMSDVAEALGARPVRVPRLAAVATSEVVARLPFVPSLLEWLHAGRTSVVMD
EECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEEEE
TGKAREQLGWTPRYSGAEALSSLAKAFH
CCHHHHHCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]