| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801406
Identifier: 108801406
GI number: 108801406
Start: 4724099
End: 4724974
Strand: Reverse
Name: 108801406
Synonym: Mmcs_4443
Alternate gene names: NA
Gene position: 4724974-4724099 (Counterclockwise)
Preceding gene: 108801407
Following gene: 108801401
Centisome position: 82.82
GC content: 64.04
Gene sequence:
>876_bases ATGGGGAAGATCTTCATCGGCACGGAGGCGTTGGCCGGCGGCGCCGTCACACGACATGAGCTGGCGCGCTGGCACACACG CATCTATCCGGATGTGTATTGCCCCAACCAGGCGGAGCTTTCGCTGAAGGACAGGATCTATGCGGCTTGGCTATGGTCAC GACGACGCGCGGTCATCGGGGGACTGTCGGCCGCGGCGATGCAGGGTGCTCCGTGGATCGATGACGACATCCCCATCGAA TTGATCTGGAACAACACCCATGCCCCCGAAGGTCTTATCGTCCGCAACGACACCCTCGCCGCGGACGAGGTGGACCGTTT CGGTCGGCTGCCCGTGACCAACTGCGCGCGAACGGCTTTCGACCTCGGTCGACGACTGCCACGCGACGATGCTGTCGCAC GACTGGATGCGCTCATGTGGGCGCAGCGCTTCCGTGTCGACGATGTCTGGTCGCTGGCGGAGCGTTATCCCCGCGCTCGA GGATTGAAGGGATTACGCATCGCGTTGCCGCTGGTCGACGCGGGCGCAGCCTCACCGAAGGAGACGTGGCTGCGGCTGCT CCTCATCGACAACGGATACGACTCGCTGACTACGCAGATCCCGGTCTTCGACCACCGCGGCCTCATCGGGGTCTCGGATA TGGGCTGGCCCGAGCTGAGGATCGCTGTCGAGTGCGACGGGGATTATCACCGGACGAACCGGAGGCGTTATGTGATGGAT CAGCGCAAGTTGCGACGTCTCGCGGCACTCGGCTGGATCGTCGTGCGGGTGATCGCCGAAGACGACGAGGCCGACATCCT TGCGCGCGTTGGGCATGCGCGAAGGGTTCGCGAGGCTGAAGTGTCGCAGGGGGCTTCTCGTACTTTGGCTGCGTGA
Upstream 100 bases:
>100_bases TGGCGCCGCGAGGCTGAAGCCACGCAGGGGGTTTCTCGTACTTTCGCTGCGTGAGTTCAGTGTCGCGCAGGGTGTCGGTG CCCACTGCCAGCATCAGCGC
Downstream 100 bases:
>100_bases GTTCAGTCTCGCGCGAGAATCAACCCCGACCTCACCAGTACGGCTCGCCGAGGTGGTGGCACTTGTTCCCACCGGCCCGT TTCGCCTCGTACATCGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MGKIFIGTEALAGGAVTRHELARWHTRIYPDVYCPNQAELSLKDRIYAAWLWSRRRAVIGGLSAAAMQGAPWIDDDIPIE LIWNNTHAPEGLIVRNDTLAADEVDRFGRLPVTNCARTAFDLGRRLPRDDAVARLDALMWAQRFRVDDVWSLAERYPRAR GLKGLRIALPLVDAGAASPKETWLRLLLIDNGYDSLTTQIPVFDHRGLIGVSDMGWPELRIAVECDGDYHRTNRRRYVMD QRKLRRLAALGWIVVRVIAEDDEADILARVGHARRVREAEVSQGASRTLAA
Sequences:
>Translated_291_residues MGKIFIGTEALAGGAVTRHELARWHTRIYPDVYCPNQAELSLKDRIYAAWLWSRRRAVIGGLSAAAMQGAPWIDDDIPIE LIWNNTHAPEGLIVRNDTLAADEVDRFGRLPVTNCARTAFDLGRRLPRDDAVARLDALMWAQRFRVDDVWSLAERYPRAR GLKGLRIALPLVDAGAASPKETWLRLLLIDNGYDSLTTQIPVFDHRGLIGVSDMGWPELRIAVECDGDYHRTNRRRYVMD QRKLRRLAALGWIVVRVIAEDDEADILARVGHARRVREAEVSQGASRTLAA >Mature_290_residues GKIFIGTEALAGGAVTRHELARWHTRIYPDVYCPNQAELSLKDRIYAAWLWSRRRAVIGGLSAAAMQGAPWIDDDIPIEL IWNNTHAPEGLIVRNDTLAADEVDRFGRLPVTNCARTAFDLGRRLPRDDAVARLDALMWAQRFRVDDVWSLAERYPRARG LKGLRIALPLVDAGAASPKETWLRLLLIDNGYDSLTTQIPVFDHRGLIGVSDMGWPELRIAVECDGDYHRTNRRRYVMDQ RKLRRLAALGWIVVRVIAEDDEADILARVGHARRVREAEVSQGASRTLAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011335 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32808; Mature: 32677
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKIFIGTEALAGGAVTRHELARWHTRIYPDVYCPNQAELSLKDRIYAAWLWSRRRAVIG CCEEEEECHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHC GLSAAAMQGAPWIDDDIPIELIWNNTHAPEGLIVRNDTLAADEVDRFGRLPVTNCARTAF CCHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHH DLGRRLPRDDAVARLDALMWAQRFRVDDVWSLAERYPRARGLKGLRIALPLVDAGAASPK HHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCEEEEEEEECCCCCCCH ETWLRLLLIDNGYDSLTTQIPVFDHRGLIGVSDMGWPELRIAVECDGDYHRTNRRRYVMD HHEEEEEEEECCCCCCEEECCEECCCCEEECCCCCCCEEEEEEEECCCCCCCCCHHHHHH QRKLRRLAALGWIVVRVIAEDDEADILARVGHARRVREAEVSQGASRTLAA HHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCC >Mature Secondary Structure GKIFIGTEALAGGAVTRHELARWHTRIYPDVYCPNQAELSLKDRIYAAWLWSRRRAVIG CEEEEECHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHC GLSAAAMQGAPWIDDDIPIELIWNNTHAPEGLIVRNDTLAADEVDRFGRLPVTNCARTAF CCHHHHHCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCHHHHHHHCCCCHHHHHHHHH DLGRRLPRDDAVARLDALMWAQRFRVDDVWSLAERYPRARGLKGLRIALPLVDAGAASPK HHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHCCCCCEEEEEEEECCCCCCCH ETWLRLLLIDNGYDSLTTQIPVFDHRGLIGVSDMGWPELRIAVECDGDYHRTNRRRYVMD HHEEEEEEEECCCCCCEEECCEECCCCEEECCCCCCCEEEEEEEECCCCCCCCCHHHHHH QRKLRRLAALGWIVVRVIAEDDEADILARVGHARRVREAEVSQGASRTLAA HHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]