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The map label for this gene is 108801354

Identifier: 108801354

GI number: 108801354

Start: 4668803

End: 4669951

Strand: Reverse

Name: 108801354

Synonym: Mmcs_4391

Alternate gene names: NA

Gene position: 4669951-4668803 (Counterclockwise)

Preceding gene: 108801355

Following gene: 108801353

Centisome position: 81.85

GC content: 67.54

Gene sequence:

>1149_bases
ATGAATGCCGTCCTCGACCACCTCGCGATCGAATTGCCGTCCTGGGCGTTCGGCAACTCCGGCACCCGCTTCAAGGTGTT
CGGCACGCCCGGCACCGCCCGCACCGTGCAGGAGAAGATCGCCGACGCCGCGATGGTGCACCGGATGACCGGGCTGGCGC
CGACGGTCGCGCTGCACATCCCGTGGGACACCGTCGACGACTACGCCGCATTGTCGGCCTACGCCCAGGACCACGGGGTG
ACGCTGGGCACGGTCAACTCCAACACCTTCCAGGACGACGACTACAAGTTCGGCAGCCTCACCCACACCGACAAAGCCGT
GCGGCAGAAGGCGATCGACCACCACCTGCACTGCATCGAGGTGATGAACCAGACCGGTTCGCGCGACCTCAAGGTGTGGC
TGGCCGACGGCACCAACTATCCGGGCCAGGGCGACATCCGCGGCCGCCAGGACCGCCTCGCCGATTCGCTGGCCGCGATC
TACCAGCATATCGGCCCGAACCAGCGAATGGTGTTGGAGTACAAGTTCTTCGAACCGGCGATGTACATGACCGACGTCCC
GGACTGGGGGACGTCCTACGCGCACGTCACCGTGCTGGGGGAGCGGGCGATGGTCTGCCTGGACACGGGCCATCACGCGC
CCGGCACCAACATCGAGTTCATCGTGGCGCAGCTGCTGCGGCTGGGGCGGCTGGGCTCGTTCGACTTCAACTCCCGCTTC
TACGCCGACGACGACCTCATCGTGGGGGCGGCCGATCCGTTCCAGCTGTTCCGCATCATGTTCGAGGTCATCCGGGGCGG
CGGGCTGGACCCGCAGTCGGGTGTCGCGCTGATGCTCGACCAGTGCCACAACGTCGAGGCGAAGATCCCCGGGCAGATCC
GGTCGGTGCTCAACGTGCTGGAGATGACCGCGCGGGCGCTGCTCGTCGACACCGACGCACTGACCGCCGCGCAGGAGGCC
TCGGACGTGCTGGGCGCCAACGCGATCCTCATGGACGCGTTCTACACCGACGTGCGGCCGCAGCTGGCGCAGTGGCGCTC
CGAACGGGGGCTGCCGGCCGACCCGATGACGGCCTTCGCCGAATCGGGCTATCAGGAGACCATCAACGCCGACCGCGTCG
GCGGCACACAATCGAGCTGGGGAGCGTGA

Upstream 100 bases:

>100_bases
GGGCGCCGCAGACCCGCGGTAAGACCCTCAAACAGATCGAAGCCGAACGCTACGGCGCCCCCGTCTCACCGGCGAACGTC
GAGAAAGCAGCTGTCACACC

Downstream 100 bases:

>100_bases
CGCATGACTGACACCGTGAGAGAACTGATCGACCGCTCCAACCGTCTGGGCGCCGACCCGAAGAACACCAACTACGCCGG
CGGCAACACCTCGGCCAAGG

Product: rhamnose isomerase related

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MNAVLDHLAIELPSWAFGNSGTRFKVFGTPGTARTVQEKIADAAMVHRMTGLAPTVALHIPWDTVDDYAALSAYAQDHGV
TLGTVNSNTFQDDDYKFGSLTHTDKAVRQKAIDHHLHCIEVMNQTGSRDLKVWLADGTNYPGQGDIRGRQDRLADSLAAI
YQHIGPNQRMVLEYKFFEPAMYMTDVPDWGTSYAHVTVLGERAMVCLDTGHHAPGTNIEFIVAQLLRLGRLGSFDFNSRF
YADDDLIVGAADPFQLFRIMFEVIRGGGLDPQSGVALMLDQCHNVEAKIPGQIRSVLNVLEMTARALLVDTDALTAAQEA
SDVLGANAILMDAFYTDVRPQLAQWRSERGLPADPMTAFAESGYQETINADRVGGTQSSWGA

Sequences:

>Translated_382_residues
MNAVLDHLAIELPSWAFGNSGTRFKVFGTPGTARTVQEKIADAAMVHRMTGLAPTVALHIPWDTVDDYAALSAYAQDHGV
TLGTVNSNTFQDDDYKFGSLTHTDKAVRQKAIDHHLHCIEVMNQTGSRDLKVWLADGTNYPGQGDIRGRQDRLADSLAAI
YQHIGPNQRMVLEYKFFEPAMYMTDVPDWGTSYAHVTVLGERAMVCLDTGHHAPGTNIEFIVAQLLRLGRLGSFDFNSRF
YADDDLIVGAADPFQLFRIMFEVIRGGGLDPQSGVALMLDQCHNVEAKIPGQIRSVLNVLEMTARALLVDTDALTAAQEA
SDVLGANAILMDAFYTDVRPQLAQWRSERGLPADPMTAFAESGYQETINADRVGGTQSSWGA
>Mature_382_residues
MNAVLDHLAIELPSWAFGNSGTRFKVFGTPGTARTVQEKIADAAMVHRMTGLAPTVALHIPWDTVDDYAALSAYAQDHGV
TLGTVNSNTFQDDDYKFGSLTHTDKAVRQKAIDHHLHCIEVMNQTGSRDLKVWLADGTNYPGQGDIRGRQDRLADSLAAI
YQHIGPNQRMVLEYKFFEPAMYMTDVPDWGTSYAHVTVLGERAMVCLDTGHHAPGTNIEFIVAQLLRLGRLGSFDFNSRF
YADDDLIVGAADPFQLFRIMFEVIRGGGLDPQSGVALMLDQCHNVEAKIPGQIRSVLNVLEMTARALLVDTDALTAAQEA
SDVLGANAILMDAFYTDVRPQLAQWRSERGLPADPMTAFAESGYQETINADRVGGTQSSWGA

Specific function: Unknown

COG id: COG4952

COG function: function code M; Predicted sugar isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnose isomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013451
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 41879; Mature: 41879

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAVLDHLAIELPSWAFGNSGTRFKVFGTPGTARTVQEKIADAAMVHRMTGLAPTVALHI
CCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
PWDTVDDYAALSAYAQDHGVTLGTVNSNTFQDDDYKFGSLTHTDKAVRQKAIDHHLHCIE
CCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VMNQTGSRDLKVWLADGTNYPGQGDIRGRQDRLADSLAAIYQHIGPNQRMVLEYKFFEPA
HHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCE
MYMTDVPDWGTSYAHVTVLGERAMVCLDTGHHAPGTNIEFIVAQLLRLGRLGSFDFNSRF
EEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEE
YADDDLIVGAADPFQLFRIMFEVIRGGGLDPQSGVALMLDQCHNVEAKIPGQIRSVLNVL
ECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHEEHHHCCCCCCCCHHHHHHHHHH
EMTARALLVDTDALTAAQEASDVLGANAILMDAFYTDVRPQLAQWRSERGLPADPMTAFA
HHHHHHHEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHH
ESGYQETINADRVGGTQSSWGA
HCCHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNAVLDHLAIELPSWAFGNSGTRFKVFGTPGTARTVQEKIADAAMVHRMTGLAPTVALHI
CCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEE
PWDTVDDYAALSAYAQDHGVTLGTVNSNTFQDDDYKFGSLTHTDKAVRQKAIDHHLHCIE
CCCCCHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
VMNQTGSRDLKVWLADGTNYPGQGDIRGRQDRLADSLAAIYQHIGPNQRMVLEYKFFEPA
HHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCE
MYMTDVPDWGTSYAHVTVLGERAMVCLDTGHHAPGTNIEFIVAQLLRLGRLGSFDFNSRF
EEEECCCCCCCCEEEEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEE
YADDDLIVGAADPFQLFRIMFEVIRGGGLDPQSGVALMLDQCHNVEAKIPGQIRSVLNVL
ECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCHHHEEHHHCCCCCCCCHHHHHHHHHH
EMTARALLVDTDALTAAQEASDVLGANAILMDAFYTDVRPQLAQWRSERGLPADPMTAFA
HHHHHHHEEECHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHH
ESGYQETINADRVGGTQSSWGA
HCCHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]