| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801342
Identifier: 108801342
GI number: 108801342
Start: 4657438
End: 4658121
Strand: Reverse
Name: 108801342
Synonym: Mmcs_4379
Alternate gene names: NA
Gene position: 4658121-4657438 (Counterclockwise)
Preceding gene: 108801344
Following gene: 108801340
Centisome position: 81.64
GC content: 66.81
Gene sequence:
>684_bases ATGACGGAGCCGCATACGCACGACCTCGCCATGCGGATGGCGGAATTGGCGCGAACGCTCGCCTCTCCTCGCGACCTCAA CGAGATTCTGTCCGGAGTCACCGCGGCGGCCGAGGAACTCATCCCGGGCGTCGACACCGCGGGCATCCTGCTCGTCGGCC GTGGGGGAACGTTCGAATCGATCGCCGAGATCACCGCGCTGCCCCACGAACTCGACGAACTGCAGATGAAATACGGCGAG GGGCCGTGCGTACAGGCCGCACTGGACGACGTCGTCGTGCGCACCGACGACTTCCGCGAGGAGACCCGCTGGCCGAACTA TTCGCCGGCGTGCGTCGAACGGGGTGTGCTGAGCGGATTGTCGTTCAAGCTCTACACCGCCGATCGCACCGCAGGCGCGC TGAACTTGTTCAGCTTCCGCCCGCGGGTCTGGGACAGCGAAGCCGAGACCACCGGGACGGTGCTGGCCGCGCACGCGGCG GCCGCGTTGCTCGCGCACCGCGAAGGTGAGCAGCTGAGGTCCGCGCTGTCCACCCGTGACCGCATCGGTCAGGCCAAGGG CATCATCATGGAGCGCTACAAGGTCGACGACGTGCAGGCGTTCGAGATGATGCGCCGCCTGTCGCAGGACAGCAACAAGA AGCTGACCGAGATCGCGCAGCAGGTGATCGACACCCGCGCCTGA
Upstream 100 bases:
>100_bases GTGGTCGACCGCCACACCTGCCCCCGGCAGCAATGCCCAGACTCGGAGATCACAAACGTAATCGGTGTGCGTTGCGCCCA CATCGGGAAGACTGCTCCAT
Downstream 100 bases:
>100_bases TCAGTCGTGGTGGCCGTGCTTCCAGTGGCCGTTGCCCCGGCCGCGCGGCCCGTCGTCGTACCACTCCACCCATCGCGGGG TGTCGACGCAGGCGTAGGCG
Product: response regulator receiver/ANTAR domain-containing protein
Products: NA
Alternate protein names: Response Regulator Receiver/ANTAR Domain-Containing Protein; Two-Component System Response Regulator; Response Regulator Receiver And ANTAR Domain Protein; GAF Sensor Protein; ANTAR Domain Protein; Two Component System Response Regulator; Response Regulator With Antiterminator Output Domain; Transcriptional Regulator; Antar Domain-Containing Protein; Response Regulator; ANTAR/GAF Domain-Containing Protein; Transcription Antitermination Regulator; PAS/PAC Sensor Protein; Transcriptional Activator Protein TraR; Antar Domain Protein
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTEPHTHDLAMRMAELARTLASPRDLNEILSGVTAAAEELIPGVDTAGILLVGRGGTFESIAEITALPHELDELQMKYGE GPCVQAALDDVVVRTDDFREETRWPNYSPACVERGVLSGLSFKLYTADRTAGALNLFSFRPRVWDSEAETTGTVLAAHAA AALLAHREGEQLRSALSTRDRIGQAKGIIMERYKVDDVQAFEMMRRLSQDSNKKLTEIAQQVIDTRA
Sequences:
>Translated_227_residues MTEPHTHDLAMRMAELARTLASPRDLNEILSGVTAAAEELIPGVDTAGILLVGRGGTFESIAEITALPHELDELQMKYGE GPCVQAALDDVVVRTDDFREETRWPNYSPACVERGVLSGLSFKLYTADRTAGALNLFSFRPRVWDSEAETTGTVLAAHAA AALLAHREGEQLRSALSTRDRIGQAKGIIMERYKVDDVQAFEMMRRLSQDSNKKLTEIAQQVIDTRA >Mature_226_residues TEPHTHDLAMRMAELARTLASPRDLNEILSGVTAAAEELIPGVDTAGILLVGRGGTFESIAEITALPHELDELQMKYGEG PCVQAALDDVVVRTDDFREETRWPNYSPACVERGVLSGLSFKLYTADRTAGALNLFSFRPRVWDSEAETTGTVLAAHAAA ALLAHREGEQLRSALSTRDRIGQAKGIIMERYKVDDVQAFEMMRRLSQDSNKKLTEIAQQVIDTRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24957; Mature: 24825
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS50921 ANTAR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPHTHDLAMRMAELARTLASPRDLNEILSGVTAAAEELIPGVDTAGILLVGRGGTFES CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHH IAEITALPHELDELQMKYGEGPCVQAALDDVVVRTDDFREETRWPNYSPACVERGVLSGL HHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCC SFKLYTADRTAGALNLFSFRPRVWDSEAETTGTVLAAHAAAALLAHREGEQLRSALSTRD CEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RIGQAKGIIMERYKVDDVQAFEMMRRLSQDSNKKLTEIAQQVIDTRA HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TEPHTHDLAMRMAELARTLASPRDLNEILSGVTAAAEELIPGVDTAGILLVGRGGTFES CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHH IAEITALPHELDELQMKYGEGPCVQAALDDVVVRTDDFREETRWPNYSPACVERGVLSGL HHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCC SFKLYTADRTAGALNLFSFRPRVWDSEAETTGTVLAAHAAAALLAHREGEQLRSALSTRD CEEEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RIGQAKGIIMERYKVDDVQAFEMMRRLSQDSNKKLTEIAQQVIDTRA HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA