| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is acrR [C]
Identifier: 108801211
GI number: 108801211
Start: 4513345
End: 4513983
Strand: Reverse
Name: acrR [C]
Synonym: Mmcs_4247
Alternate gene names: 108801211
Gene position: 4513983-4513345 (Counterclockwise)
Preceding gene: 108801220
Following gene: 108801209
Centisome position: 79.12
GC content: 66.98
Gene sequence:
>639_bases ATGGCAGCGCCTGACAAGGAAGTGCGCGCACCCCGCGCCCGGATGACCGGCAGTGAACGGCGCCAACAGCTCGTCGAGAT CGCCAAGTCGCTGTTCGCCCAGCGCGGTTACGAGGGCACTTCGATCGAGGAGATCGCGCAGCGCGCCAACGTGAGCAAAC CCGTGGTCTACGAACACTTCGGCGGTAAGGAAGGGCTCTACGCCGTGGTCGTCGACCGCGAGATGTCGGCGTTGCTCGAC GGCATCACCTCGTCGCTGACCAACAACCGCTCGCGGGTGCGGGTGGAGCGGGTCGCGCTCGCGCTGCTGACCTACGTCGA GGAGCGCACCGACGGCTTCCGCATCCTGATCCGGGATTCACCGGCGGCGATCACCTCGGGCACCTATTCGACCCTGCTCA ACGACGCCGTCAACCAGGTCAGCTCGATCCTCGCGGGTGACTTCTCCCGCCGGGGGCTCGATCCGGAGCTGGCGCCGCTG TACGCCCAGGCCCTGGTGGGGTCGGTGTCGATGACCGCGCAGTGGTGGCTCGACACCCGTGAGCCCAAGAAAGAGGTCGT CGCCGCGCATCTGGTGAACCTGATGTGGAACGGCCTGACCCATCTGGAGGCCGACCCGCGGTTGCAGGACGAGGAGTGA
Upstream 100 bases:
>100_bases TCGAACCTGAACTATCTGAACCAAAATCAGAGGTGCTGCCGATTACACCACGACGGATCGATCACCTCGAGATGGTAGTC GAAGCCGATACGCTCGCCTT
Downstream 100 bases:
>100_bases CTCAGTCGGCGCCGGTGCCGCTGCTGCCGTCGGCGCCGTCTTTGCCGTCCTTTCCTACCTTGGCGCCACCGTCGCCGCCG CGGCCGCCGGATCCCGACCA
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; TetR-Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein TetR; TetR-Type Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulatory Protein; TetR-Family Regulatory Protein; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcriptional Regulator TetR-Family; TetR-Family Protein Regulatory Protein; Transcription Regulator; TetR-Family Transcriptional Regulator Protein
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MAAPDKEVRAPRARMTGSERRQQLVEIAKSLFAQRGYEGTSIEEIAQRANVSKPVVYEHFGGKEGLYAVVVDREMSALLD GITSSLTNNRSRVRVERVALALLTYVEERTDGFRILIRDSPAAITSGTYSTLLNDAVNQVSSILAGDFSRRGLDPELAPL YAQALVGSVSMTAQWWLDTREPKKEVVAAHLVNLMWNGLTHLEADPRLQDEE
Sequences:
>Translated_212_residues MAAPDKEVRAPRARMTGSERRQQLVEIAKSLFAQRGYEGTSIEEIAQRANVSKPVVYEHFGGKEGLYAVVVDREMSALLD GITSSLTNNRSRVRVERVALALLTYVEERTDGFRILIRDSPAAITSGTYSTLLNDAVNQVSSILAGDFSRRGLDPELAPL YAQALVGSVSMTAQWWLDTREPKKEVVAAHLVNLMWNGLTHLEADPRLQDEE >Mature_211_residues AAPDKEVRAPRARMTGSERRQQLVEIAKSLFAQRGYEGTSIEEIAQRANVSKPVVYEHFGGKEGLYAVVVDREMSALLDG ITSSLTNNRSRVRVERVALALLTYVEERTDGFRILIRDSPAAITSGTYSTLLNDAVNQVSSILAGDFSRRGLDPELAPLY AQALVGSVSMTAQWWLDTREPKKEVVAAHLVNLMWNGLTHLEADPRLQDEE
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23514; Mature: 23383
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPDKEVRAPRARMTGSERRQQLVEIAKSLFAQRGYEGTSIEEIAQRANVSKPVVYEHF CCCCCCHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEECCC GGKEGLYAVVVDREMSALLDGITSSLTNNRSRVRVERVALALLTYVEERTDGFRILIRDS CCCCCEEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC PAAITSGTYSTLLNDAVNQVSSILAGDFSRRGLDPELAPLYAQALVGSVSMTAQWWLDTR CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC EPKKEVVAAHLVNLMWNGLTHLEADPRLQDEE CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AAPDKEVRAPRARMTGSERRQQLVEIAKSLFAQRGYEGTSIEEIAQRANVSKPVVYEHF CCCCCHHCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCEEECCC GGKEGLYAVVVDREMSALLDGITSSLTNNRSRVRVERVALALLTYVEERTDGFRILIRDS CCCCCEEEEEECHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC PAAITSGTYSTLLNDAVNQVSSILAGDFSRRGLDPELAPLYAQALVGSVSMTAQWWLDTR CCCCCCCHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC EPKKEVVAAHLVNLMWNGLTHLEADPRLQDEE CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA