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The map label for this gene is 108801130

Identifier: 108801130

GI number: 108801130

Start: 4430909

End: 4432291

Strand: Reverse

Name: 108801130

Synonym: Mmcs_4166

Alternate gene names: NA

Gene position: 4432291-4430909 (Counterclockwise)

Preceding gene: 108801131

Following gene: 108801129

Centisome position: 77.69

GC content: 66.09

Gene sequence:

>1383_bases
ATGCAGACCACATCAGCGGCCGTTTACCTGCGCATTTCAGCGGACCCAACCGGCCAGCAACTCGGCGTGGCACGCCAGCG
GGAGGATTGCGTGGCGCTCTGCGAGTCGAAAGGGTGGCAGCCGGTCGAGTACGTCGACAACGACGTCAGCGCGTCGAGCG
GCCGGCGACGACCCGCGTATGAGCGGATGCTCACCGACATTCGCGACGGGAAGATCGGTGCCGTAGTGGCGTGGGACTTG
GACCGGCTGCATCGCCGTCCGATCGAGCTCGAACGGTTCATGGACCTCGCCGACGCGCACCGGCTGGCGCTGGCGACGGT
CAGCGGCGATGTCGACCTGTCGACCTCGCAGGGGAAGCTCGTCGCCCGGCTCAAGGGCGCGGTGGCCCGCCACGAGGTTG
ACCACAAGCGCGACCGCCAGCTCCGCGCGGCGCAGCAGAAGGCCGAGCGCGGCGAGCCGCAATGGCGCAACGCATTCGGG
TACCTGCCAGACGGGAGCCGGGTTCCCGATCCGACAACGGCGCCCCTGGTGAAGCAGGCATATGCTGCGGTGCTCGCGGG
CGCATCGCTAAACGACATCTGTCGCCTGTTCAATGATGCTGGCGCGTACGGGCTCAACGGAAAGCCATGGACTGCAACGC
TTGTCAGCCAGTTTCTTCGCAAACCGCGCAACGCGGGTCTGCGGTCGCACAACGGCGAGATTGTCGGCAAGGGGACGTGG
CCGGAATTGGTGGATGAAAGCCTATGGCGTGCAGCGCAATCGGTGCTCGACGCGCCCGGACGGGCGCCGGGTCGCAAGAC
AGTTCGCCGTCATCTGCTCACCGGCGTTCTCGGCTGCGGCAAGTGCGGCCATTACTTGTCAGGAATGCAGACGGTCGACC
GTAAGCGAATCACCTACGCCTGCAAGGAATGTCGCGGTGTGAGTATCCGCGCCGATTATGTTGAGCCCATCGTGATTGGT
CTGGTGGCAGGCCGGTTGGCGATGGGTGATGCGGTCAACCTGCTGCGCGCCGAGCACGACGACGCCGAGGCCGAGAAGCT
GCGCACCGAGGCCAATACGCTGCGGGCACGACTTGACGAGATCGCGGGTGAGCGGGCTGACGGATTGATTGACGGCAAGG
GGTATCGCGTCATGGTCGACCGGATCAACGGCCAACTGGCCGTGATCGAGCGGCGCCAGCAGGACGCCGAGCGCGTCCGG
GTGTTTGACGGGTTGCCGCTCGGCACGCCCGAGGTCGACGCCGCGGTCGGTAAGTTGTCGCCGGACCGGTTGCGGGCGGT
GATCGACGTGCTGGTCACTCTGACGGCTGAGCCAGTCGGCAAGGGCGGCAACACCTTTGACCCCGATCGAGTCAAGTATG
CGTGGAAGGTCTGCCCGCGGTGA

Upstream 100 bases:

>100_bases
CGACGTCGTCGGCGGTTACCACGCGCTCGAGGCCGAAGGCGTTCTCGTCTAACTGTTCTCGTCGGAGTGCACCAGCGACT
ATCCGAAGTATACTCTAGGG

Downstream 100 bases:

>100_bases
AGCTGCTGCCAGAGGGGGTTATCCCGATTCAGTGTGACGACCCATCGCACCGTTCGCCGGTGACGATCGCCAACGTCTAT
CCGATGCGTGGATTCGAAAG

Product: recombinase

Products: NA

Alternate protein names: Resolvase Domain-Containing Protein; Resolvase Domain Protein; Site-Specific Recombinase; Integrase/Recombinase; Site-Specific Recombinase DNA Invertase Pin; Resolvase Domain; Cassette Chromosome Recombinase B; Integrase; Site-Specific DNA Recombinase; DNA Recombinase; Site-Specific Recombinase For Integration And Excision; Phage Integrase; Site-Specific Integrase; Resolvase; Site-Specific RecombinaIVCA; Invertase/Recombinase Like Protein; Site-Specific Resolvase Protein; Prophage Protein; Phage DNA Invertase; Transposase; Phage Site-Specific Recombinase; Site-Specific Recombinases; Recombinase Family Protein; Site-Specific Recombinase Resolvase Domain Protein; Resolvase Family Site-Specific Recombinase; Resolvase-Like Protein; Integrase /Recombinase; Ntegrase/Recombinase.; Cassette Chromosome Recombinase C; Resolvase N Terminal Domain Family; Resolvase/Recombinase Domain Protein; Site-Specific Recombinase/Resolvase; Gin Phage Site-Specific Recombinase Resolvase; PhiRv1 Phage Integrase; Site-Specific Integrase Protein

Number of amino acids: Translated: 460; Mature: 460

Protein sequence:

>460_residues
MQTTSAAVYLRISADPTGQQLGVARQREDCVALCESKGWQPVEYVDNDVSASSGRRRPAYERMLTDIRDGKIGAVVAWDL
DRLHRRPIELERFMDLADAHRLALATVSGDVDLSTSQGKLVARLKGAVARHEVDHKRDRQLRAAQQKAERGEPQWRNAFG
YLPDGSRVPDPTTAPLVKQAYAAVLAGASLNDICRLFNDAGAYGLNGKPWTATLVSQFLRKPRNAGLRSHNGEIVGKGTW
PELVDESLWRAAQSVLDAPGRAPGRKTVRRHLLTGVLGCGKCGHYLSGMQTVDRKRITYACKECRGVSIRADYVEPIVIG
LVAGRLAMGDAVNLLRAEHDDAEAEKLRTEANTLRARLDEIAGERADGLIDGKGYRVMVDRINGQLAVIERRQQDAERVR
VFDGLPLGTPEVDAAVGKLSPDRLRAVIDVLVTLTAEPVGKGGNTFDPDRVKYAWKVCPR

Sequences:

>Translated_460_residues
MQTTSAAVYLRISADPTGQQLGVARQREDCVALCESKGWQPVEYVDNDVSASSGRRRPAYERMLTDIRDGKIGAVVAWDL
DRLHRRPIELERFMDLADAHRLALATVSGDVDLSTSQGKLVARLKGAVARHEVDHKRDRQLRAAQQKAERGEPQWRNAFG
YLPDGSRVPDPTTAPLVKQAYAAVLAGASLNDICRLFNDAGAYGLNGKPWTATLVSQFLRKPRNAGLRSHNGEIVGKGTW
PELVDESLWRAAQSVLDAPGRAPGRKTVRRHLLTGVLGCGKCGHYLSGMQTVDRKRITYACKECRGVSIRADYVEPIVIG
LVAGRLAMGDAVNLLRAEHDDAEAEKLRTEANTLRARLDEIAGERADGLIDGKGYRVMVDRINGQLAVIERRQQDAERVR
VFDGLPLGTPEVDAAVGKLSPDRLRAVIDVLVTLTAEPVGKGGNTFDPDRVKYAWKVCPR
>Mature_460_residues
MQTTSAAVYLRISADPTGQQLGVARQREDCVALCESKGWQPVEYVDNDVSASSGRRRPAYERMLTDIRDGKIGAVVAWDL
DRLHRRPIELERFMDLADAHRLALATVSGDVDLSTSQGKLVARLKGAVARHEVDHKRDRQLRAAQQKAERGEPQWRNAFG
YLPDGSRVPDPTTAPLVKQAYAAVLAGASLNDICRLFNDAGAYGLNGKPWTATLVSQFLRKPRNAGLRSHNGEIVGKGTW
PELVDESLWRAAQSVLDAPGRAPGRKTVRRHLLTGVLGCGKCGHYLSGMQTVDRKRITYACKECRGVSIRADYVEPIVIG
LVAGRLAMGDAVNLLRAEHDDAEAEKLRTEANTLRARLDEIAGERADGLIDGKGYRVMVDRINGQLAVIERRQQDAERVR
VFDGLPLGTPEVDAAVGKLSPDRLRAVIDVLVTLTAEPVGKGGNTFDPDRVKYAWKVCPR

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50505; Mature: 50505

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTTSAAVYLRISADPTGQQLGVARQREDCVALCESKGWQPVEYVDNDVSASSGRRRPAY
CCCCCEEEEEEEECCCCCHHHCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHH
ERMLTDIRDGKIGAVVAWDLDRLHRRPIELERFMDLADAHRLALATVSGDVDLSTSQGKL
HHHHHHCCCCCEEEEEEECHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCEECCCCCHH
VARLKGAVARHEVDHKRDRQLRAAQQKAERGEPQWRNAFGYLPDGSRVPDPTTAPLVKQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHH
YAAVLAGASLNDICRLFNDAGAYGLNGKPWTATLVSQFLRKPRNAGLRSHNGEIVGKGTW
HHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHCCCCCCCCEEEECCCC
PELVDESLWRAAQSVLDAPGRAPGRKTVRRHLLTGVLGCGKCGHYLSGMQTVDRKRITYA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
CKECRGVSIRADYVEPIVIGLVAGRLAMGDAVNLLRAEHDDAEAEKLRTEANTLRARLDE
HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IAGERADGLIDGKGYRVMVDRINGQLAVIERRQQDAERVRVFDGLPLGTPEVDAAVGKLS
HCCCCCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC
PDRLRAVIDVLVTLTAEPVGKGGNTFDPDRVKYAWKVCPR
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEECCCC
>Mature Secondary Structure
MQTTSAAVYLRISADPTGQQLGVARQREDCVALCESKGWQPVEYVDNDVSASSGRRRPAY
CCCCCEEEEEEEECCCCCHHHCCHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCHHH
ERMLTDIRDGKIGAVVAWDLDRLHRRPIELERFMDLADAHRLALATVSGDVDLSTSQGKL
HHHHHHCCCCCEEEEEEECHHHHCCCCCHHHHHHHHHHHHHEEEEEECCCCEECCCCCHH
VARLKGAVARHEVDHKRDRQLRAAQQKAERGEPQWRNAFGYLPDGSRVPDPTTAPLVKQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCHHHHHHH
YAAVLAGASLNDICRLFNDAGAYGLNGKPWTATLVSQFLRKPRNAGLRSHNGEIVGKGTW
HHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHCCCCCCCCEEEECCCC
PELVDESLWRAAQSVLDAPGRAPGRKTVRRHLLTGVLGCGKCGHYLSGMQTVDRKRITYA
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
CKECRGVSIRADYVEPIVIGLVAGRLAMGDAVNLLRAEHDDAEAEKLRTEANTLRARLDE
HHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
IAGERADGLIDGKGYRVMVDRINGQLAVIERRQQDAERVRVFDGLPLGTPEVDAAVGKLS
HCCCCCCCCCCCCCCEEEEEECCCEEEEHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCC
PDRLRAVIDVLVTLTAEPVGKGGNTFDPDRVKYAWKVCPR
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA