| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108801084
Identifier: 108801084
GI number: 108801084
Start: 4385593
End: 4386252
Strand: Reverse
Name: 108801084
Synonym: Mmcs_4120
Alternate gene names: NA
Gene position: 4386252-4385593 (Counterclockwise)
Preceding gene: 108801087
Following gene: 108801083
Centisome position: 76.88
GC content: 73.33
Gene sequence:
>660_bases ATGACCGTCGACCCCGGCCAGCCGGAACCGCCCCCGCAGGAGTGGTCCGGGCCGGCGCCCAAGGAGGCCAAACCGCGGGT GCTGCAGGACGGCCGGGACATGTTCTGGTCGCTCGCCCCGCTGGTGGTGGCGTGTGTCGTGCTGGCAGGTCTGCTCGGCA TGTGCTCGTTCCAGGGCCGCGGCCCGACGGAGGGGCCTGCACCGGCCCACGACGCGGCGTCGGCGCTGCAGGCCGATGCC GACGCACTGAAGATCCCGATCCGGCTGCCCGCGCTGCCCGACGGTTGGCGGTCGAACTCCGGCGGCCGGTCGGGCATCGA GGGCGGCGCCGCCGACCCGGGCACCGGGGCGCCCACGCGTGCGGTGGTCTCGCGGGTGGGCTACCTGGCGCCGAGCGGTA AGTACCTGAGCCTCACGCAGAGCAACGCCGACGAGGACAAACTCGTCGAGTCCATCAGCCCCGGCCTCGTCCCGGCCGGT GCGCAGGATGTCGACGGCGTGAGCTGGGTGGTCTATCAGGGCGGCGACGGGGTCGAGCCCGTGTGGACCACACGGCTGCC CGGAGACGTACAGATCGCGATCACCGGGGCCGGCAGCACCGACGAGTTCCGCACGCTGGCCGCCGCGACCCAGAAGCAGC AGCCACTGACCCCGAGGTAG
Upstream 100 bases:
>100_bases GGCGCGATGAGCCGCTTGCGCGAAGAGCATCAGGGTCAGCTGGCATGCGCAGATTGTCCCAGAAGCCGCTCACCGTCGGG AGGCTGGGATACTGGCTGTC
Downstream 100 bases:
>100_bases GCGCATGACCGCACGCAACCCCAATGTCGCCGCCGGGGCGGCTCCGGCTGCAGACCTGAGCGGCTGGACCGCCGAACCCT TCACCGCCGCCGGCTACACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MTVDPGQPEPPPQEWSGPAPKEAKPRVLQDGRDMFWSLAPLVVACVVLAGLLGMCSFQGRGPTEGPAPAHDAASALQADA DALKIPIRLPALPDGWRSNSGGRSGIEGGAADPGTGAPTRAVVSRVGYLAPSGKYLSLTQSNADEDKLVESISPGLVPAG AQDVDGVSWVVYQGGDGVEPVWTTRLPGDVQIAITGAGSTDEFRTLAAATQKQQPLTPR
Sequences:
>Translated_219_residues MTVDPGQPEPPPQEWSGPAPKEAKPRVLQDGRDMFWSLAPLVVACVVLAGLLGMCSFQGRGPTEGPAPAHDAASALQADA DALKIPIRLPALPDGWRSNSGGRSGIEGGAADPGTGAPTRAVVSRVGYLAPSGKYLSLTQSNADEDKLVESISPGLVPAG AQDVDGVSWVVYQGGDGVEPVWTTRLPGDVQIAITGAGSTDEFRTLAAATQKQQPLTPR >Mature_218_residues TVDPGQPEPPPQEWSGPAPKEAKPRVLQDGRDMFWSLAPLVVACVVLAGLLGMCSFQGRGPTEGPAPAHDAASALQADAD ALKIPIRLPALPDGWRSNSGGRSGIEGGAADPGTGAPTRAVVSRVGYLAPSGKYLSLTQSNADEDKLVESISPGLVPAGA QDVDGVSWVVYQGGDGVEPVWTTRLPGDVQIAITGAGSTDEFRTLAAATQKQQPLTPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22568; Mature: 22437
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVDPGQPEPPPQEWSGPAPKEAKPRVLQDGRDMFWSLAPLVVACVVLAGLLGMCSFQGR CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GPTEGPAPAHDAASALQADADALKIPIRLPALPDGWRSNSGGRSGIEGGAADPGTGAPTR CCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH AVVSRVGYLAPSGKYLSLTQSNADEDKLVESISPGLVPAGAQDVDGVSWVVYQGGDGVEP HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCC VWTTRLPGDVQIAITGAGSTDEFRTLAAATQKQQPLTPR EEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TVDPGQPEPPPQEWSGPAPKEAKPRVLQDGRDMFWSLAPLVVACVVLAGLLGMCSFQGR CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC GPTEGPAPAHDAASALQADADALKIPIRLPALPDGWRSNSGGRSGIEGGAADPGTGAPTR CCCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH AVVSRVGYLAPSGKYLSLTQSNADEDKLVESISPGLVPAGAQDVDGVSWVVYQGGDGVEP HHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCCCCCC VWTTRLPGDVQIAITGAGSTDEFRTLAAATQKQQPLTPR EEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA