| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
Click here to switch to the map view.
The map label for this gene is 108801048
Identifier: 108801048
GI number: 108801048
Start: 4352704
End: 4353966
Strand: Reverse
Name: 108801048
Synonym: Mmcs_4084
Alternate gene names: NA
Gene position: 4353966-4352704 (Counterclockwise)
Preceding gene: 108801050
Following gene: 108801047
Centisome position: 76.31
GC content: 74.11
Gene sequence:
>1263_bases ATGACGGCGCGCCGGCTCGCGGCGGTCGACGCCCAGAACCTGTGGATGTCGGCCAAGATGCCTGACGACCAGTTCCTGGT CTACGGCTTCGCCGGGCTACCCGGAGACCTGCCGGGCACCATCGCCGCGATCCTCGAGCGGGCCCCGTCCTGCGGAGAAC TGCGGCTGCGGGTGCGCGACCGGGGTCGGCTGAGGTATCCGGAGTGGGTCGACGGCGGTGTCGACGACGCCCAGGTGCGC ACGCATGCGGCCGACGACTGGTCGGAGTGTCTGGCCGCGGTCACGGCGCTGACCGGCGACCAACTCGACGCGCGGACGGC CGCCTGGCGGCTGCATGTCTTCAGCCCCGTGCGGGCGATACCCGGCGTCGAGGGTGCGGGCACCGTGGCGGTGGTGCAGG TGTCGCATGCGCTCGCCGACGGGCTGCGGTCCGCGGCGTTGGCGGCGTGGCTGTTCGGCAGGCCTGCGCCGGTCGACGCG GTGACGGTGGCGCCGTGGGAGTCGGCGACGCTGCCGTTGCGCGCGGTCCGCGCGGCGCGCGCACACCGGCAGCTGATGCG CGACGTGACAGCCGGAACCGTTGCGGCGCAGGCAGGTTCGCGTCCCGCCTTACGCAGCAACGCCCGCCCGGACGGCGCCC GGGACCTGCGCACCGTGGTGCGCCGTCGCGCCGACCTGCCGACAGGCACCGTCACCGTGTCGGTTCTGGCCGCCGTCTCG CGTGCCCTGGCCGACCATCTGCGCGAACTCGGCGACGATCCGTCCACGCTCGGCGCCGAGGTGCCGATGGCGAGTCCGGG TCCGCGACGGGCGCACAACCACTTCGGCAACGTCGGGGTCGGGTTGCACCCGGATCTGCCGCACGCCGAACGCAGTTCCC GCATCGCCGCGGAACTGGCGCAACGCAGACAGCGGGCCGCCCACCCCGCGATGCGGGCGGCCACCCTGGCGTCGGCCGCG GTTCCGGCGCCGCTCATGCGGTGGGGGGTTGTGGCGTTCGACCCGACGGTCCGCTCACCGACGGCGATCGGCAACACCGT CGTGTCGAGTGTCCACCGCGGGGCTGCCGACCTGCACTTCGGCGGGGCGCCGGTGGTGCTGACGACCGGCTGTCCGTCGT TGTCGCCGATGCAGGGCCTGACCCACGGCGTGCACGGAATCGGTGACACCGTCGCGGTCAGCGTGCACGCCGCCGAGTCG GCCGTCGGCGACATCGACGCCTACGTCGACCGGCTGGCGGCCGCGCTGGACCGGCCCGAATAG
Upstream 100 bases:
>100_bases GGCGATCTGCTCGCCGATCCCCGACGAGGCGCCGGTGACGAGCGCCACCCCGGTGCTGCTGCTGGCCGGAAGCATGCGGC GAAGCTTAACCTCGGACGCT
Downstream 100 bases:
>100_bases GCACCCGAATAGGCACAGGGGGGTGGGCGCCGACTTAACAGATGGCCTAGATTCTGTTGCATGACTGCCTACGATGTCGG CGTTCTGATCCTGCGAGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTARRLAAVDAQNLWMSAKMPDDQFLVYGFAGLPGDLPGTIAAILERAPSCGELRLRVRDRGRLRYPEWVDGGVDDAQVR THAADDWSECLAAVTALTGDQLDARTAAWRLHVFSPVRAIPGVEGAGTVAVVQVSHALADGLRSAALAAWLFGRPAPVDA VTVAPWESATLPLRAVRAARAHRQLMRDVTAGTVAAQAGSRPALRSNARPDGARDLRTVVRRRADLPTGTVTVSVLAAVS RALADHLRELGDDPSTLGAEVPMASPGPRRAHNHFGNVGVGLHPDLPHAERSSRIAAELAQRRQRAAHPAMRAATLASAA VPAPLMRWGVVAFDPTVRSPTAIGNTVVSSVHRGAADLHFGGAPVVLTTGCPSLSPMQGLTHGVHGIGDTVAVSVHAAES AVGDIDAYVDRLAAALDRPE
Sequences:
>Translated_420_residues MTARRLAAVDAQNLWMSAKMPDDQFLVYGFAGLPGDLPGTIAAILERAPSCGELRLRVRDRGRLRYPEWVDGGVDDAQVR THAADDWSECLAAVTALTGDQLDARTAAWRLHVFSPVRAIPGVEGAGTVAVVQVSHALADGLRSAALAAWLFGRPAPVDA VTVAPWESATLPLRAVRAARAHRQLMRDVTAGTVAAQAGSRPALRSNARPDGARDLRTVVRRRADLPTGTVTVSVLAAVS RALADHLRELGDDPSTLGAEVPMASPGPRRAHNHFGNVGVGLHPDLPHAERSSRIAAELAQRRQRAAHPAMRAATLASAA VPAPLMRWGVVAFDPTVRSPTAIGNTVVSSVHRGAADLHFGGAPVVLTTGCPSLSPMQGLTHGVHGIGDTVAVSVHAAES AVGDIDAYVDRLAAALDRPE >Mature_419_residues TARRLAAVDAQNLWMSAKMPDDQFLVYGFAGLPGDLPGTIAAILERAPSCGELRLRVRDRGRLRYPEWVDGGVDDAQVRT HAADDWSECLAAVTALTGDQLDARTAAWRLHVFSPVRAIPGVEGAGTVAVVQVSHALADGLRSAALAAWLFGRPAPVDAV TVAPWESATLPLRAVRAARAHRQLMRDVTAGTVAAQAGSRPALRSNARPDGARDLRTVVRRRADLPTGTVTVSVLAAVSR ALADHLRELGDDPSTLGAEVPMASPGPRRAHNHFGNVGVGLHPDLPHAERSSRIAAELAQRRQRAAHPAMRAATLASAAV PAPLMRWGVVAFDPTVRSPTAIGNTVVSSVHRGAADLHFGGAPVVLTTGCPSLSPMQGLTHGVHGIGDTVAVSVHAAESA VGDIDAYVDRLAAALDRPE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44052; Mature: 43921
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARRLAAVDAQNLWMSAKMPDDQFLVYGFAGLPGDLPGTIAAILERAPSCGELRLRVRD CCCHHHHHHCHHHCEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEC RGRLRYPEWVDGGVDDAQVRTHAADDWSECLAAVTALTGDQLDARTAAWRLHVFSPVRAI CCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHEEEEECCHHHHC PGVEGAGTVAVVQVSHALADGLRSAALAAWLFGRPAPVDAVTVAPWESATLPLRAVRAAR CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHH AHRQLMRDVTAGTVAAQAGSRPALRSNARPDGARDLRTVVRRRADLPTGTVTVSVLAAVS HHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH RALADHLRELGDDPSTLGAEVPMASPGPRRAHNHFGNVGVGLHPDLPHAERSSRIAAELA HHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH QRRQRAAHPAMRAATLASAAVPAPLMRWGVVAFDPTVRSPTAIGNTVVSSVHRGAADLHF HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEC GGAPVVLTTGCPSLSPMQGLTHGVHGIGDTVAVSVHAAESAVGDIDAYVDRLAAALDRPE CCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TARRLAAVDAQNLWMSAKMPDDQFLVYGFAGLPGDLPGTIAAILERAPSCGELRLRVRD CCHHHHHHCHHHCEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCEEEEEEC RGRLRYPEWVDGGVDDAQVRTHAADDWSECLAAVTALTGDQLDARTAAWRLHVFSPVRAI CCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHEEEEECCHHHHC PGVEGAGTVAVVQVSHALADGLRSAALAAWLFGRPAPVDAVTVAPWESATLPLRAVRAAR CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHH AHRQLMRDVTAGTVAAQAGSRPALRSNARPDGARDLRTVVRRRADLPTGTVTVSVLAAVS HHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH RALADHLRELGDDPSTLGAEVPMASPGPRRAHNHFGNVGVGLHPDLPHAERSSRIAAELA HHHHHHHHHHCCCHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH QRRQRAAHPAMRAATLASAAVPAPLMRWGVVAFDPTVRSPTAIGNTVVSSVHRGAADLHF HHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCCCCCEEC GGAPVVLTTGCPSLSPMQGLTHGVHGIGDTVAVSVHAAESAVGDIDAYVDRLAAALDRPE CCCCEEEECCCCCCCHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA