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The map label for this gene is mmgC [H]

Identifier: 108801042

GI number: 108801042

Start: 4346173

End: 4347315

Strand: Reverse

Name: mmgC [H]

Synonym: Mmcs_4078

Alternate gene names: 108801042

Gene position: 4347315-4346173 (Counterclockwise)

Preceding gene: 108801043

Following gene: 108801040

Centisome position: 76.2

GC content: 65.18

Gene sequence:

>1143_bases
ATGAAGCGAACGATCTACGAAGCGGAGCACGAAGCCTTCCGCCAGACCGTCAAGGATTACATCGAGCGTGAGCTCGTACC
CAACTCGGAGAAGTGGGAGACCGAGCGTCTGGTCGACCGGTCCGCGTACACCGCGGCCGGCAAGTACGGGCTCATCGGCT
TCAACATGCCCGAGGAGTTCGGCGGCGGTGGCTCGGATGACTTCCGGTTCAACGCCATCATCGACGAGGAGATCGCCAAG
GCCGGTGTGCACGGTCCGGCGCTGAGCCTGCACAACGACGTCGTCGCCCCGTACTTCAACGAGCTGACCAACGACGAGCA
GAAGCAGCGCTGGATGCCCGGCATCACCAGCGGCGAGCTGATCATCGCGATCGCGATGACCGAGCCCGGCGCCGGCAGCG
ACCTGGCGGGCATCCGCACCTCCGCGGTGCGCGACGGTGACGATTGGATCATCAACGGGTCCAAGACGTTCATCTCCTCG
GGCATCAACTGCGACCTGTGCGTCGTGGTTGCGCGCACCGATCCGGAAGCCGGCCACAAGGGCTTCACCCTGTTCGTGGT
GGAGCGCGGCATGGAGGGCTTCACCCGGGGCCGCAAGCTCGACAAGATGGGCCTGCACAGCCAGGACACCTCCGAGCTGC
ACTTCGAGAACGTCCGGGTGCCCAACGCCAACCTGCTCGGCAAGGAAGGTCGCGGCTTCTACCACCTGATGACCAACCTG
CCTTCGGAGCGGCTGTCGATCGCCATCTCGGCGATCGCCGGTGCCCGCGCGGTGTTCGACGAGACGCTGCAGTACTGCAA
GGACCGCAAGGCCTTCGGGCAGCCGATCGGCAGCTTCCAGCACAACCGTTTCCTGCTCGCCGAGATGGAGACCGAGCTGG
ACGTCACCGAGAACTACATCGACCGCTGCCTGCAGGGCGTGGTCGACGGTGAGCTGACCGCCGTCGAGGCGGCCAAGGCC
AAGTGGTGGGCGACCGAGACCGCCAAGAAGATCGTCGACAACTGCGTGCAGCTGCACGGCGGCTACGGCTACATGCTGGA
GTACCGCGTGGCACGCGCCTACGTCGACGGCCGCATCCAGACGATCTTCGGTGGCACCACCGAGATCATGAAGGAGATCA
TCGGCCGCGACCTGGGCGTCTGA

Upstream 100 bases:

>100_bases
ACCGAGGACGCCATGGAAGGGCCGCTGGCATTCGCGCAGAAGCGCGAGCCGGTCTGGAAGGCGAAGTAAGCCAAGTACGA
CAAGACGTTAGGAACAGAAG

Downstream 100 bases:

>100_bases
CTCCGCCCAGCAGACACAGAATCGCCCCTTTTCCTCGGAAAAGGGGCGATTCTGTACGGGGCACCTCCCGCTTGCGGGGG
ACTGCTGGGCTGTAGCTCAG

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MKRTIYEAEHEAFRQTVKDYIERELVPNSEKWETERLVDRSAYTAAGKYGLIGFNMPEEFGGGGSDDFRFNAIIDEEIAK
AGVHGPALSLHNDVVAPYFNELTNDEQKQRWMPGITSGELIIAIAMTEPGAGSDLAGIRTSAVRDGDDWIINGSKTFISS
GINCDLCVVVARTDPEAGHKGFTLFVVERGMEGFTRGRKLDKMGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNL
PSERLSIAISAIAGARAVFDETLQYCKDRKAFGQPIGSFQHNRFLLAEMETELDVTENYIDRCLQGVVDGELTAVEAAKA
KWWATETAKKIVDNCVQLHGGYGYMLEYRVARAYVDGRIQTIFGGTTEIMKEIIGRDLGV

Sequences:

>Translated_380_residues
MKRTIYEAEHEAFRQTVKDYIERELVPNSEKWETERLVDRSAYTAAGKYGLIGFNMPEEFGGGGSDDFRFNAIIDEEIAK
AGVHGPALSLHNDVVAPYFNELTNDEQKQRWMPGITSGELIIAIAMTEPGAGSDLAGIRTSAVRDGDDWIINGSKTFISS
GINCDLCVVVARTDPEAGHKGFTLFVVERGMEGFTRGRKLDKMGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNL
PSERLSIAISAIAGARAVFDETLQYCKDRKAFGQPIGSFQHNRFLLAEMETELDVTENYIDRCLQGVVDGELTAVEAAKA
KWWATETAKKIVDNCVQLHGGYGYMLEYRVARAYVDGRIQTIFGGTTEIMKEIIGRDLGV
>Mature_380_residues
MKRTIYEAEHEAFRQTVKDYIERELVPNSEKWETERLVDRSAYTAAGKYGLIGFNMPEEFGGGGSDDFRFNAIIDEEIAK
AGVHGPALSLHNDVVAPYFNELTNDEQKQRWMPGITSGELIIAIAMTEPGAGSDLAGIRTSAVRDGDDWIINGSKTFISS
GINCDLCVVVARTDPEAGHKGFTLFVVERGMEGFTRGRKLDKMGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNL
PSERLSIAISAIAGARAVFDETLQYCKDRKAFGQPIGSFQHNRFLLAEMETELDVTENYIDRCLQGVVDGELTAVEAAKA
KWWATETAKKIVDNCVQLHGGYGYMLEYRVARAYVDGRIQTIFGGTTEIMKEIIGRDLGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=378, Percent_Identity=47.6190476190476, Blast_Score=367, Evalue=1e-101,
Organism=Homo sapiens, GI226958412, Length=373, Percent_Identity=33.5120643431635, Blast_Score=230, Evalue=2e-60,
Organism=Homo sapiens, GI226958414, Length=333, Percent_Identity=35.4354354354354, Blast_Score=219, Evalue=3e-57,
Organism=Homo sapiens, GI4557233, Length=381, Percent_Identity=34.3832020997375, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI7656849, Length=372, Percent_Identity=33.6021505376344, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI4501859, Length=371, Percent_Identity=30.188679245283, Blast_Score=195, Evalue=7e-50,
Organism=Homo sapiens, GI187960098, Length=381, Percent_Identity=31.2335958005249, Blast_Score=188, Evalue=9e-48,
Organism=Homo sapiens, GI4557231, Length=381, Percent_Identity=31.2335958005249, Blast_Score=187, Evalue=1e-47,
Organism=Homo sapiens, GI76496475, Length=388, Percent_Identity=31.9587628865979, Blast_Score=176, Evalue=5e-44,
Organism=Homo sapiens, GI4557235, Length=388, Percent_Identity=31.9587628865979, Blast_Score=175, Evalue=6e-44,
Organism=Homo sapiens, GI21361497, Length=381, Percent_Identity=32.5459317585302, Blast_Score=164, Evalue=9e-41,
Organism=Homo sapiens, GI4503943, Length=373, Percent_Identity=26.0053619302949, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI7669494, Length=297, Percent_Identity=26.2626262626263, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI48976061, Length=281, Percent_Identity=26.3345195729537, Blast_Score=93, Evalue=5e-19,
Organism=Homo sapiens, GI211971008, Length=281, Percent_Identity=26.3345195729537, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI38505218, Length=386, Percent_Identity=26.1658031088083, Blast_Score=88, Evalue=2e-17,
Organism=Escherichia coli, GI87081958, Length=364, Percent_Identity=32.1428571428571, Blast_Score=162, Evalue=4e-41,
Organism=Escherichia coli, GI1786223, Length=369, Percent_Identity=28.4552845528455, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI87082384, Length=286, Percent_Identity=26.9230769230769, Blast_Score=66, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17538396, Length=374, Percent_Identity=33.4224598930481, Blast_Score=223, Evalue=1e-58,
Organism=Caenorhabditis elegans, GI17508101, Length=372, Percent_Identity=32.258064516129, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17551932, Length=380, Percent_Identity=33.4210526315789, Blast_Score=209, Evalue=2e-54,
Organism=Caenorhabditis elegans, GI17505929, Length=373, Percent_Identity=34.3163538873995, Blast_Score=207, Evalue=5e-54,
Organism=Caenorhabditis elegans, GI17570075, Length=375, Percent_Identity=34.6666666666667, Blast_Score=206, Evalue=2e-53,
Organism=Caenorhabditis elegans, GI17534899, Length=363, Percent_Identity=34.435261707989, Blast_Score=201, Evalue=4e-52,
Organism=Caenorhabditis elegans, GI17569725, Length=363, Percent_Identity=33.6088154269972, Blast_Score=197, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17506239, Length=329, Percent_Identity=33.7386018237082, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17533517, Length=376, Percent_Identity=32.1808510638298, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI71990804, Length=277, Percent_Identity=35.7400722021661, Blast_Score=183, Evalue=2e-46,
Organism=Caenorhabditis elegans, GI71985184, Length=362, Percent_Identity=30.6629834254144, Blast_Score=155, Evalue=2e-38,
Organism=Caenorhabditis elegans, GI32563615, Length=231, Percent_Identity=36.3636363636364, Blast_Score=154, Evalue=8e-38,
Organism=Caenorhabditis elegans, GI71982178, Length=269, Percent_Identity=29.7397769516729, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17534353, Length=375, Percent_Identity=29.6, Blast_Score=131, Evalue=6e-31,
Organism=Caenorhabditis elegans, GI71985192, Length=314, Percent_Identity=28.0254777070064, Blast_Score=125, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17531909, Length=239, Percent_Identity=28.4518828451883, Blast_Score=111, Evalue=5e-25,
Organism=Caenorhabditis elegans, GI17562446, Length=284, Percent_Identity=29.2253521126761, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17552648, Length=165, Percent_Identity=30.3030303030303, Blast_Score=68, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI86563383, Length=267, Percent_Identity=27.7153558052434, Blast_Score=67, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI86563381, Length=267, Percent_Identity=27.7153558052434, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21356377, Length=367, Percent_Identity=31.8801089918256, Blast_Score=204, Evalue=6e-53,
Organism=Drosophila melanogaster, GI21355753, Length=381, Percent_Identity=33.0708661417323, Blast_Score=201, Evalue=6e-52,
Organism=Drosophila melanogaster, GI24666513, Length=381, Percent_Identity=32.2834645669291, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI24660351, Length=370, Percent_Identity=32.972972972973, Blast_Score=190, Evalue=2e-48,
Organism=Drosophila melanogaster, GI24646207, Length=374, Percent_Identity=30.7486631016043, Blast_Score=179, Evalue=3e-45,
Organism=Drosophila melanogaster, GI281363737, Length=385, Percent_Identity=30.3896103896104, Blast_Score=170, Evalue=1e-42,
Organism=Drosophila melanogaster, GI19920834, Length=381, Percent_Identity=26.509186351706, Blast_Score=112, Evalue=6e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42194; Mature: 42194

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00072 ACYL_COA_DH_1 ; PS00073 ACYL_COA_DH_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRTIYEAEHEAFRQTVKDYIERELVPNSEKWETERLVDRSAYTAAGKYGLIGFNMPEEF
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHH
GGGGSDDFRFNAIIDEEIAKAGVHGPALSLHNDVVAPYFNELTNDEQKQRWMPGITSGEL
CCCCCCCEEEEEEEHHHHHHCCCCCCCEECCCCCHHHHHHHHCCCHHHHHCCCCCCCCCE
IIAIAMTEPGAGSDLAGIRTSAVRDGDDWIINGSKTFISSGINCDLCVVVARTDPEAGHK
EEEEEEECCCCCCCCCCCHHHHCCCCCCEEECCCHHHHHCCCCCEEEEEEEECCCCCCCC
GFTLFVVERGMEGFTRGRKLDKMGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNL
CEEEEEEECCCHHHHCCCCHHHCCCCCCCCCHHHHCEEECCCCCCCCCCCCCEEEHHHCC
PSERLSIAISAIAGARAVFDETLQYCKDRKAFGQPIGSFQHNRFLLAEMETELDVTENYI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHH
DRCLQGVVDGELTAVEAAKAKWWATETAKKIVDNCVQLHGGYGYMLEYRVARAYVDGRIQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEE
TIFGGTTEIMKEIIGRDLGV
EEECCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRTIYEAEHEAFRQTVKDYIERELVPNSEKWETERLVDRSAYTAAGKYGLIGFNMPEEF
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHH
GGGGSDDFRFNAIIDEEIAKAGVHGPALSLHNDVVAPYFNELTNDEQKQRWMPGITSGEL
CCCCCCCEEEEEEEHHHHHHCCCCCCCEECCCCCHHHHHHHHCCCHHHHHCCCCCCCCCE
IIAIAMTEPGAGSDLAGIRTSAVRDGDDWIINGSKTFISSGINCDLCVVVARTDPEAGHK
EEEEEEECCCCCCCCCCCHHHHCCCCCCEEECCCHHHHHCCCCCEEEEEEEECCCCCCCC
GFTLFVVERGMEGFTRGRKLDKMGLHSQDTSELHFENVRVPNANLLGKEGRGFYHLMTNL
CEEEEEEECCCHHHHCCCCHHHCCCCCCCCCHHHHCEEECCCCCCCCCCCCCEEEHHHCC
PSERLSIAISAIAGARAVFDETLQYCKDRKAFGQPIGSFQHNRFLLAEMETELDVTENYI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHH
DRCLQGVVDGELTAVEAAKAKWWATETAKKIVDNCVQLHGGYGYMLEYRVARAYVDGRIQ
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEEE
TIFGGTTEIMKEIIGRDLGV
EEECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]