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The map label for this gene is lprB [H]

Identifier: 108800903

GI number: 108800903

Start: 4197582

End: 4198169

Strand: Reverse

Name: lprB [H]

Synonym: Mmcs_3939

Alternate gene names: 108800903

Gene position: 4198169-4197582 (Counterclockwise)

Preceding gene: 108800907

Following gene: 108800902

Centisome position: 73.58

GC content: 66.5

Gene sequence:

>588_bases
GTGCATGGCGTGAACCCCAGCACGCGCACGACGGGACGGACCCGCCACGCGAAAGCGCTGGCTGCGCTGGCGGCGGCCGC
GCTTCCGCTGTTGGCCGCCTGTTCGTCGGATTCGGAGCCCGCGGCGCCGGGTGAGTCGCCGCAGAGCACCCAGGCCCAGC
AGGACATCAAGCACGGCCCGTTCTTCCCGCAGTGCGGCGGGATCAGCGACCAGACCATGAGCCAGCTCACCGAGGTGCCG
GGTCTGGTGAACACCGCGACGACATCGGTGGGCTGCCAGTGGCTGGCCGGCGGCAGCATCGTCGGGCCGCACTTCTCGTT
CACCCATTTCCGCGGCAGCCCGATCGGGCGTGAGCGCAAGACCGAGGAACTGTCGCGCACCAGCGTCGAGGACATCAACA
TCGAGGGTCACGACGGGTTCATCGCCACCGGCGACGATCTGGCGCTGGGCACCAACCTGTGTGAGATCGGCATCCAGTTC
GACAACGACTTCATCGAATGGTCGGTCAGCTTCGCCGAGAAACCCTTCCCGGATCCGTGTGAGGTCGCCAAAGAGCTCAC
CCGTCAATCGATTGTGAACTCCCGATGA

Upstream 100 bases:

>100_bases
TGCCGCAGCAGGCCCCAGAGCATCTCGCTACTGTCGCACACCGAAGAAACTTGCAGGTCAACCGGCATGTCGGTGGTTCA
CGATCAGCGCTGCCGCTACA

Downstream 100 bases:

>100_bases
GCCGCTCCGCACGGACTCTGGCCGCCGTGGCCGCCCTGCTGGCCGCCCTGACGATGCTGCTGGGCTGCACGCGCACCGTC
GAGGGCACGGCCGCGCGCGC

Product: putative lipoprotein LprB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MHGVNPSTRTTGRTRHAKALAALAAAALPLLAACSSDSEPAAPGESPQSTQAQQDIKHGPFFPQCGGISDQTMSQLTEVP
GLVNTATTSVGCQWLAGGSIVGPHFSFTHFRGSPIGRERKTEELSRTSVEDINIEGHDGFIATGDDLALGTNLCEIGIQF
DNDFIEWSVSFAEKPFPDPCEVAKELTRQSIVNSR

Sequences:

>Translated_195_residues
MHGVNPSTRTTGRTRHAKALAALAAAALPLLAACSSDSEPAAPGESPQSTQAQQDIKHGPFFPQCGGISDQTMSQLTEVP
GLVNTATTSVGCQWLAGGSIVGPHFSFTHFRGSPIGRERKTEELSRTSVEDINIEGHDGFIATGDDLALGTNLCEIGIQF
DNDFIEWSVSFAEKPFPDPCEVAKELTRQSIVNSR
>Mature_195_residues
MHGVNPSTRTTGRTRHAKALAALAAAALPLLAACSSDSEPAAPGESPQSTQAQQDIKHGPFFPQCGGISDQTMSQLTEVP
GLVNTATTSVGCQWLAGGSIVGPHFSFTHFRGSPIGRERKTEELSRTSVEDINIEGHDGFIATGDDLALGTNLCEIGIQF
DNDFIEWSVSFAEKPFPDPCEVAKELTRQSIVNSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20738; Mature: 20738

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGVNPSTRTTGRTRHAKALAALAAAALPLLAACSSDSEPAAPGESPQSTQAQQDIKHGP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
FFPQCGGISDQTMSQLTEVPGLVNTATTSVGCQWLAGGSIVGPHFSFTHFRGSPIGRERK
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCEEEECCCCEECCCCEEEECCCCCCCCHHH
TEELSRTSVEDINIEGHDGFIATGDDLALGTNLCEIGIQFDNDFIEWSVSFAEKPFPDPC
HHHHHHCCHHHCEECCCCCEEECCCCCHHCCCEEEEEEEECCCEEEEEHHHCCCCCCCHH
EVAKELTRQSIVNSR
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MHGVNPSTRTTGRTRHAKALAALAAAALPLLAACSSDSEPAAPGESPQSTQAQQDIKHGP
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCC
FFPQCGGISDQTMSQLTEVPGLVNTATTSVGCQWLAGGSIVGPHFSFTHFRGSPIGRERK
CCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCEEEECCCCEECCCCEEEECCCCCCCCHHH
TEELSRTSVEDINIEGHDGFIATGDDLALGTNLCEIGIQFDNDFIEWSVSFAEKPFPDPC
HHHHHHCCHHHCEECCCCCEEECCCCCHHCCCEEEEEEEECCCEEEEEHHHCCCCCCCHH
EVAKELTRQSIVNSR
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]