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The map label for this gene is ycdM [C]

Identifier: 108800871

GI number: 108800871

Start: 4161701

End: 4162582

Strand: Reverse

Name: ycdM [C]

Synonym: Mmcs_3907

Alternate gene names: 108800871

Gene position: 4162582-4161701 (Counterclockwise)

Preceding gene: 108800877

Following gene: 108800870

Centisome position: 72.96

GC content: 70.63

Gene sequence:

>882_bases
ATGACCCTGCCGGTGATGGAACCCGATCTCGACTCCGCGACCCTGCGCGCGTGGGCCCGGGTGATCGACGAGGGGCCGTT
CTCCGCGCTGTGCTGGGGTGAGCGGATCGCCTTCGACAACCCCGAGAGCCTGACCCTGCTCGGTGCGGTGGCGGCGTGGA
CGGAGCGCGTCCGGTTGGTGACGACGGTGATCGTGCCCCAGTTGCACGATCCGGTCATGCTCGCCAAGGCGCTCGCGACC
GGAGACCTCATCAGCGGTGGCCGGTTGACGGTGGGGATCGGCGTCGGCGGCAGGCACGAGGACTACGAGGCGGTCAGCGC
GGATCCGGCGACGCAGACCATGCGGCAGCTGGCGGAGCGGGTCGCGGTGATGAAGCGGGTCTGGGCGGGGGAGAAGGTGA
CGGAATCGGTGCTGCCGGTGGGGCCGCCGCCGGTGCAGGTGGGTGGCCCGCCGCTGCTGGTCGGCACCATCGGACCCAAG
ACGGTGCGCAGCGCGGCGGCGTGGGCCGACGGCATGGCCGGCACCATCCTCGACCTCGACCCGGTCAAGCAGAACGAGTT
GTTCGACGTCGCGCGCACCGCCTGGGCGGACGCGGGTAAACCGCGGCCACACCTGGCGACGTCGTTCTGGTTCGCCCTCG
GTGACCGGGACGAGGCGCGGGCCCAGGTGCATCGGCATCTGCGCCGCTACATGAACTGGATCCCGGGTGAGTACGTCGAC
GCGATGGCCCCGGCGACGGGGTTCGCCGGCACCGAGGACGATCTGCTCGCGGTGCTCGAGCAGTTCGAGCGGATCGGTAC
CGACGAGGTGCACCTGATCCCGACCAGCTCGGACGTCGATCAGCTGACCCGGATCGCCGACGTGGTGAAGGACCGGGTGT
AG

Upstream 100 bases:

>100_bases
GTCCAACCTATGGAGTGCGCGTCCGCTGCGACACAGCGTTTTCCGCCGAGCTCGCCGGGGGTTAACCCCCGGATGCCAGA
ATCGCGGGGTGCGAATCGGA

Downstream 100 bases:

>100_bases
CCCATGGCCGCCGACCACCTTCCTCCGATCGTCTCGCGCTCGGAGTGGGAGCACGCCCGCGCCGAACTGCTGGTCCGGGA
GAAGGAGCTGATGAGGCTCA

Product: luciferase-like protein

Products: NA

Alternate protein names: MmcJ Protein; Luciferase-Like Protein; Flavin-Dependent Oxidoreductase; Luciferase-Like Monooxygenase

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTLPVMEPDLDSATLRAWARVIDEGPFSALCWGERIAFDNPESLTLLGAVAAWTERVRLVTTVIVPQLHDPVMLAKALAT
GDLISGGRLTVGIGVGGRHEDYEAVSADPATQTMRQLAERVAVMKRVWAGEKVTESVLPVGPPPVQVGGPPLLVGTIGPK
TVRSAAAWADGMAGTILDLDPVKQNELFDVARTAWADAGKPRPHLATSFWFALGDRDEARAQVHRHLRRYMNWIPGEYVD
AMAPATGFAGTEDDLLAVLEQFERIGTDEVHLIPTSSDVDQLTRIADVVKDRV

Sequences:

>Translated_293_residues
MTLPVMEPDLDSATLRAWARVIDEGPFSALCWGERIAFDNPESLTLLGAVAAWTERVRLVTTVIVPQLHDPVMLAKALAT
GDLISGGRLTVGIGVGGRHEDYEAVSADPATQTMRQLAERVAVMKRVWAGEKVTESVLPVGPPPVQVGGPPLLVGTIGPK
TVRSAAAWADGMAGTILDLDPVKQNELFDVARTAWADAGKPRPHLATSFWFALGDRDEARAQVHRHLRRYMNWIPGEYVD
AMAPATGFAGTEDDLLAVLEQFERIGTDEVHLIPTSSDVDQLTRIADVVKDRV
>Mature_292_residues
TLPVMEPDLDSATLRAWARVIDEGPFSALCWGERIAFDNPESLTLLGAVAAWTERVRLVTTVIVPQLHDPVMLAKALATG
DLISGGRLTVGIGVGGRHEDYEAVSADPATQTMRQLAERVAVMKRVWAGEKVTESVLPVGPPPVQVGGPPLLVGTIGPKT
VRSAAAWADGMAGTILDLDPVKQNELFDVARTAWADAGKPRPHLATSFWFALGDRDEARAQVHRHLRRYMNWIPGEYVDA
MAPATGFAGTEDDLLAVLEQFERIGTDEVHLIPTSSDVDQLTRIADVVKDRV

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31741; Mature: 31609

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLPVMEPDLDSATLRAWARVIDEGPFSALCWGERIAFDNPESLTLLGAVAAWTERVRLV
CCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TTVIVPQLHDPVMLAKALATGDLISGGRLTVGIGVGGRHEDYEAVSADPATQTMRQLAER
HHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHH
VAVMKRVWAGEKVTESVLPVGPPPVQVGGPPLLVGTIGPKTVRSAAAWADGMAGTILDLD
HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEECC
PVKQNELFDVARTAWADAGKPRPHLATSFWFALGDRDEARAQVHRHLRRYMNWIPGEYVD
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHH
AMAPATGFAGTEDDLLAVLEQFERIGTDEVHLIPTSSDVDQLTRIADVVKDRV
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLPVMEPDLDSATLRAWARVIDEGPFSALCWGERIAFDNPESLTLLGAVAAWTERVRLV
CCCCCCCCCCHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
TTVIVPQLHDPVMLAKALATGDLISGGRLTVGIGVGGRHEDYEAVSADPATQTMRQLAER
HHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHCCCCHHHHHHHHHHHH
VAVMKRVWAGEKVTESVLPVGPPPVQVGGPPLLVGTIGPKTVRSAAAWADGMAGTILDLD
HHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCCEEECC
PVKQNELFDVARTAWADAGKPRPHLATSFWFALGDRDEARAQVHRHLRRYMNWIPGEYVD
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHH
AMAPATGFAGTEDDLLAVLEQFERIGTDEVHLIPTSSDVDQLTRIADVVKDRV
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA