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The map label for this gene is atpF

Identifier: 108800844

GI number: 108800844

Start: 4134083

End: 4134592

Strand: Reverse

Name: atpF

Synonym: Mmcs_3880

Alternate gene names: 108800844

Gene position: 4134592-4134083 (Counterclockwise)

Preceding gene: 108800845

Following gene: 108800843

Centisome position: 72.47

GC content: 66.47

Gene sequence:

>510_bases
ATGGGTGACCTGAGCACGACCATCTTGGCCGCGGAAGAAGGCGGGGGCGGTAACTTCCTCGTCCCCAACGGCACCTTCTT
CTTCGTGCTGCTCATCTTCCTGATCGTGTTGGGCGTCATCGCCAAGTGGGTGGTGCCCCCGATCAGCAAGGTGCTGCAAG
AGCGCGAAGCAATGGTCACCAAGACGGTTGAGGACAACCGCAAGGCGGCCGATCTGTTCGCCGCCGCACAGGGCGACTCC
CAGCAGGTGATGGCCAAGGCGCGTCGTGAGGCCTCGGGCATCCGGGACGAGGCCCGCGGCGAGGGTCGCAAGATCCTCGA
GGACATGCGATCCCGCGCCAGCGCGGAGTCGGCGGCCACTCTGCAGAAGACCAACGAAGAGCTGTCCCGTCAGGGCCAGC
AGACCGCGGCCGAACTGCAGTCGTCGATCGAGACGTTGTCGGCCACCCTGGCCAGCCGCGTTCTCGGGGTCGACATCTCC
AGCGCCGCCGCGACGAGCCAGGGACGGTAG

Upstream 100 bases:

>100_bases
CGGTCGGTCTGGTGGAGGCCGCGTACTTCATCAACCTGGCGTTCATGGCGCTGTTCGTCTTCGCAACCCCGGTCGCTTAG
TCAGTTTGGAATCTTCAGTC

Downstream 100 bases:

>100_bases
CGCATGTCGACATTCATCGGGCAGCTCATCGGGTTCGCGGTCATCGTGTTCCTGCTCGTGCGTTTCGTGGTGCCGCCGGT
GCGGCGCATGATGACCGCGC

Product: F0F1 ATP synthase subunit B

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MGDLSTTILAAEEGGGGNFLVPNGTFFFVLLIFLIVLGVIAKWVVPPISKVLQEREAMVTKTVEDNRKAADLFAAAQGDS
QQVMAKARREASGIRDEARGEGRKILEDMRSRASAESAATLQKTNEELSRQGQQTAAELQSSIETLSATLASRVLGVDIS
SAAATSQGR

Sequences:

>Translated_169_residues
MGDLSTTILAAEEGGGGNFLVPNGTFFFVLLIFLIVLGVIAKWVVPPISKVLQEREAMVTKTVEDNRKAADLFAAAQGDS
QQVMAKARREASGIRDEARGEGRKILEDMRSRASAESAATLQKTNEELSRQGQQTAAELQSSIETLSATLASRVLGVDIS
SAAATSQGR
>Mature_168_residues
GDLSTTILAAEEGGGGNFLVPNGTFFFVLLIFLIVLGVIAKWVVPPISKVLQEREAMVTKTVEDNRKAADLFAAAQGDSQ
QVMAKARREASGIRDEARGEGRKILEDMRSRASAESAATLQKTNEELSRQGQQTAAELQSSIETLSATLASRVLGVDISS
AAATSQGR

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_MYCSJ (A3Q3B5)

Other databases:

- EMBL:   CP000580
- RefSeq:   YP_001072133.1
- STRING:   A3Q3B5
- EnsemblBacteria:   EBMYCT00000049825
- GeneID:   4879576
- GenomeReviews:   CP000580_GR
- KEGG:   mjl:Mjls_3866
- eggNOG:   COG0711
- GeneTree:   EBGT00050000016868
- HOGENOM:   HBG565494
- OMA:   LEEYKQQ
- ProtClustDB:   PRK05759
- BioCyc:   MSP164757:MJLS_3866-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 17968; Mature: 17836

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x18cc95dc)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDLSTTILAAEEGGGGNFLVPNGTFFFVLLIFLIVLGVIAKWVVPPISKVLQEREAMVT
CCCCHHHEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTVEDNRKAADLFAAAQGDSQQVMAKARREASGIRDEARGEGRKILEDMRSRASAESAAT
HHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHH
LQKTNEELSRQGQQTAAELQSSIETLSATLASRVLGVDISSAAATSQGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCH
>Mature Secondary Structure 
GDLSTTILAAEEGGGGNFLVPNGTFFFVLLIFLIVLGVIAKWVVPPISKVLQEREAMVT
CCCHHHEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KTVEDNRKAADLFAAAQGDSQQVMAKARREASGIRDEARGEGRKILEDMRSRASAESAAT
HHHHHCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHHHHHH
LQKTNEELSRQGQQTAAELQSSIETLSATLASRVLGVDISSAAATSQGR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA