| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is menE [H]
Identifier: 108800785
GI number: 108800785
Start: 4066880
End: 4068301
Strand: Reverse
Name: menE [H]
Synonym: Mmcs_3821
Alternate gene names: 108800785
Gene position: 4068301-4066880 (Counterclockwise)
Preceding gene: 108800787
Following gene: 108800784
Centisome position: 71.31
GC content: 69.13
Gene sequence:
>1422_bases GTGAGCGATGGCCGACACGTGACGGATGCTGCCGCCCTCGCCTTCGGGGAGCGCGAGTACTCCCTGAACGAACTCGACGC GCTCGCCAGCGGTATGGCGACCAGCCTGGAGCAGCGTGGCGTCCGGGCGGGCGACCGGGTGGCGATGATGTCGTCGAACC GGCCGGAATTCGTTGCCGCACTGCGCGGAATCTGGAACCTGGGCGCCGCCGCCGTACTCATCAGCCCCGCGTGGAAACAC GCCGAGGTCGCCCACGCGCTGGAGCTGACCCGGCCCAGTCACGCCGTCGGTGACCATCCGGTCCTCGCCGAGCACATGCC GATGCTGCACCTCGACGAACCCGTCACACCGGGGCGCCGCGAATTCGACGCCGTCGATCCCGGCGCCGACGCGCTGTTCG TGTTCAGTTCCGGAACGACTGGGATGCCCAAGGCCGTCCGGCACACGCACGGCGCGTTCGCGGCCGCGGTGCGGCACTGG CGCGACGCACTGGAATTGTCGTCGGCCGACCGGATGCAGATCATGACGCCGCCGTCGCACATCCTCGGCCTTCTCAACAT CGTCATGGCGCTCGAGACGGGCACCTGGATCCGCCTGCACCCCCGCTTCGACATCGACACGATGCTGCACCACGTCGAAT CCGACCGGATCACCATCGAGATGGCCGTCGCGCCGATCGCGCTGGCACTGGCCGCGCACCCGAAGCTGGAGAGCTACGAC CTGTCGTCGCTGCGCTACATCATGTGGTGCGCCACGCCGGTCACCAAGAGTGTCGCCGACGACGTCACCCGGCGCACCGG AGTCGAGTGGGTGGCCGCCTACGGCACCACCGAGTTGCCCGTCATCGCAGCCAATCCCGTCACCGGTGCGCGACTGGACA CCGTCGGCAAGCCGGTGCCCGGTGTGCGGGTGCGGATCGTGTCGCTCGACGACGGCACGCCACTGGGTCCGGGCGAGGTG GGGGAGATCCAGGTGCGGTCGGATTCGGTCATGGCCGGCTACCTGCCGCGGGAAGCGACGTCGGCGGCGTTCGCCGACGG CTGGTACCGCACCGGCGACGTCGGACGCCTCGACGCCGAGGGCTGGCTGCGGATCACCGACCGCTCCAAGGAGATGATCA AGGTCAGGGGTTTCCAAGTGGCGCCGGCCGAGGTCGAGGCGGTGCTGCACGGACACCCCGCCGTGGAGGACTGTGCGGTC TTCGGCGAACCCCACCCCACCGACGGCGAAGCCGTGGTCGCCGCCGTGACCACCAACAGCGACGTCCCCGCCGACGAGTT GACCGAACTCGTCGCCGGAACGCTGGCGTCTTACAAGCGACCGAGCCGGGTGGTCTTCGTCCCGGCGATTCCGCGCTTGC CTTCCGGGAAGGTCCTGCGCCGAGTGTTGAAGGAGCAGCATGGATGTACGTCTGACAGCTGA
Upstream 100 bases:
>100_bases CTTCGAGCATGGTGGTTCTGATATATGGAGAACTCTATTCTCCCGAAATGATAGGCTGTTCTCAAGTGCAATGTACGGCG TCCAGGAGGGTCCGGCGGCG
Downstream 100 bases:
>100_bases ACAGCAGCAATTGCGCGACGCCGCAGCCAAACTCGCCGACGATCTCGGGCCGGGCTCGGTCGCCGATCTCGCGGACTCCG CGCGGCTCGCCCGTCTGGAG
Product: AMP-dependent synthetase and ligase
Products: NA
Alternate protein names: OSB-CoA synthetase; o-succinylbenzoyl-CoA synthetase [H]
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSDGRHVTDAAALAFGEREYSLNELDALASGMATSLEQRGVRAGDRVAMMSSNRPEFVAALRGIWNLGAAAVLISPAWKH AEVAHALELTRPSHAVGDHPVLAEHMPMLHLDEPVTPGRREFDAVDPGADALFVFSSGTTGMPKAVRHTHGAFAAAVRHW RDALELSSADRMQIMTPPSHILGLLNIVMALETGTWIRLHPRFDIDTMLHHVESDRITIEMAVAPIALALAAHPKLESYD LSSLRYIMWCATPVTKSVADDVTRRTGVEWVAAYGTTELPVIAANPVTGARLDTVGKPVPGVRVRIVSLDDGTPLGPGEV GEIQVRSDSVMAGYLPREATSAAFADGWYRTGDVGRLDAEGWLRITDRSKEMIKVRGFQVAPAEVEAVLHGHPAVEDCAV FGEPHPTDGEAVVAAVTTNSDVPADELTELVAGTLASYKRPSRVVFVPAIPRLPSGKVLRRVLKEQHGCTSDS
Sequences:
>Translated_473_residues MSDGRHVTDAAALAFGEREYSLNELDALASGMATSLEQRGVRAGDRVAMMSSNRPEFVAALRGIWNLGAAAVLISPAWKH AEVAHALELTRPSHAVGDHPVLAEHMPMLHLDEPVTPGRREFDAVDPGADALFVFSSGTTGMPKAVRHTHGAFAAAVRHW RDALELSSADRMQIMTPPSHILGLLNIVMALETGTWIRLHPRFDIDTMLHHVESDRITIEMAVAPIALALAAHPKLESYD LSSLRYIMWCATPVTKSVADDVTRRTGVEWVAAYGTTELPVIAANPVTGARLDTVGKPVPGVRVRIVSLDDGTPLGPGEV GEIQVRSDSVMAGYLPREATSAAFADGWYRTGDVGRLDAEGWLRITDRSKEMIKVRGFQVAPAEVEAVLHGHPAVEDCAV FGEPHPTDGEAVVAAVTTNSDVPADELTELVAGTLASYKRPSRVVFVPAIPRLPSGKVLRRVLKEQHGCTSDS >Mature_472_residues SDGRHVTDAAALAFGEREYSLNELDALASGMATSLEQRGVRAGDRVAMMSSNRPEFVAALRGIWNLGAAAVLISPAWKHA EVAHALELTRPSHAVGDHPVLAEHMPMLHLDEPVTPGRREFDAVDPGADALFVFSSGTTGMPKAVRHTHGAFAAAVRHWR DALELSSADRMQIMTPPSHILGLLNIVMALETGTWIRLHPRFDIDTMLHHVESDRITIEMAVAPIALALAAHPKLESYDL SSLRYIMWCATPVTKSVADDVTRRTGVEWVAAYGTTELPVIAANPVTGARLDTVGKPVPGVRVRIVSLDDGTPLGPGEVG EIQVRSDSVMAGYLPREATSAAFADGWYRTGDVGRLDAEGWLRITDRSKEMIKVRGFQVAPAEVEAVLHGHPAVEDCAVF GEPHPTDGEAVVAAVTTNSDVPADELTELVAGTLASYKRPSRVVFVPAIPRLPSGKVLRRVLKEQHGCTSDS
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Partially Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Homo sapiens, GI42544132, Length=497, Percent_Identity=26.5593561368209, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI38505220, Length=354, Percent_Identity=31.638418079096, Blast_Score=148, Evalue=1e-35, Organism=Homo sapiens, GI156151445, Length=510, Percent_Identity=26.2745098039216, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI187761345, Length=521, Percent_Identity=28.7907869481766, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI187761343, Length=521, Percent_Identity=28.7907869481766, Blast_Score=135, Evalue=9e-32, Organism=Homo sapiens, GI115511026, Length=498, Percent_Identity=26.1044176706827, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI122937307, Length=496, Percent_Identity=27.4193548387097, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI58082049, Length=469, Percent_Identity=25.5863539445629, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI157311624, Length=498, Percent_Identity=25.3012048192771, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI157311622, Length=498, Percent_Identity=25.3012048192771, Blast_Score=129, Evalue=6e-30, Organism=Homo sapiens, GI28416953, Length=535, Percent_Identity=23.9252336448598, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI8923896, Length=133, Percent_Identity=35.3383458646617, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI253970489, Length=133, Percent_Identity=35.3383458646617, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI195947378, Length=406, Percent_Identity=24.384236453202, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI27477105, Length=172, Percent_Identity=33.7209302325581, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI13375727, Length=192, Percent_Identity=29.1666666666667, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI40807491, Length=173, Percent_Identity=28.3236994219653, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1788107, Length=524, Percent_Identity=28.4351145038168, Blast_Score=167, Evalue=1e-42, Organism=Escherichia coli, GI145693145, Length=485, Percent_Identity=28.0412371134021, Blast_Score=163, Evalue=2e-41, Organism=Escherichia coli, GI221142682, Length=484, Percent_Identity=25.8264462809917, Blast_Score=129, Evalue=4e-31, Organism=Escherichia coli, GI1786810, Length=505, Percent_Identity=24.5544554455446, Blast_Score=121, Evalue=1e-28, Organism=Escherichia coli, GI1789201, Length=357, Percent_Identity=27.7310924369748, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI1786801, Length=451, Percent_Identity=25.4988913525499, Blast_Score=89, Evalue=6e-19, Organism=Escherichia coli, GI1790505, Length=373, Percent_Identity=25.7372654155496, Blast_Score=88, Evalue=9e-19, Organism=Escherichia coli, GI1786529, Length=381, Percent_Identity=25.1968503937008, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1788595, Length=467, Percent_Identity=23.5546038543897, Blast_Score=75, Evalue=8e-15, Organism=Caenorhabditis elegans, GI17557194, Length=489, Percent_Identity=28.6298568507157, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17558820, Length=485, Percent_Identity=29.0721649484536, Blast_Score=179, Evalue=4e-45, Organism=Caenorhabditis elegans, GI17531443, Length=472, Percent_Identity=29.4491525423729, Blast_Score=175, Evalue=5e-44, Organism=Caenorhabditis elegans, GI17538037, Length=488, Percent_Identity=28.0737704918033, Blast_Score=174, Evalue=1e-43, Organism=Caenorhabditis elegans, GI32563687, Length=492, Percent_Identity=27.4390243902439, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI17559526, Length=354, Percent_Identity=33.6158192090396, Blast_Score=169, Evalue=3e-42, Organism=Caenorhabditis elegans, GI25141359, Length=481, Percent_Identity=27.8586278586279, Blast_Score=154, Evalue=7e-38, Organism=Caenorhabditis elegans, GI71985884, Length=344, Percent_Identity=28.1976744186047, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17560140, Length=350, Percent_Identity=29.4285714285714, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI71994703, Length=517, Percent_Identity=25.531914893617, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71994690, Length=517, Percent_Identity=25.531914893617, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI71994694, Length=517, Percent_Identity=25.531914893617, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17560308, Length=509, Percent_Identity=23.9685658153242, Blast_Score=104, Evalue=8e-23, Organism=Caenorhabditis elegans, GI71996755, Length=485, Percent_Identity=24.3298969072165, Blast_Score=102, Evalue=6e-22, Organism=Caenorhabditis elegans, GI115534440, Length=506, Percent_Identity=22.9249011857708, Blast_Score=101, Evalue=7e-22, Organism=Caenorhabditis elegans, GI17564090, Length=355, Percent_Identity=23.943661971831, Blast_Score=85, Evalue=1e-16, Organism=Caenorhabditis elegans, GI71982997, Length=402, Percent_Identity=26.1194029850746, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71983001, Length=402, Percent_Identity=26.1194029850746, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17510401, Length=341, Percent_Identity=22.2873900293255, Blast_Score=71, Evalue=1e-12, Organism=Caenorhabditis elegans, GI17541856, Length=457, Percent_Identity=21.8818380743982, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6319699, Length=358, Percent_Identity=27.9329608938547, Blast_Score=140, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6319264, Length=401, Percent_Identity=24.6882793017456, Blast_Score=77, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6323182, Length=392, Percent_Identity=26.2755102040816, Blast_Score=74, Evalue=4e-14, Organism=Saccharomyces cerevisiae, GI6324893, Length=362, Percent_Identity=20.9944751381215, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355181, Length=512, Percent_Identity=28.7109375, Blast_Score=202, Evalue=5e-52, Organism=Drosophila melanogaster, GI18859661, Length=503, Percent_Identity=30.6163021868787, Blast_Score=195, Evalue=5e-50, Organism=Drosophila melanogaster, GI24648260, Length=505, Percent_Identity=26.5346534653465, Blast_Score=137, Evalue=2e-32, Organism=Drosophila melanogaster, GI24648253, Length=474, Percent_Identity=28.0590717299578, Blast_Score=136, Evalue=3e-32, Organism=Drosophila melanogaster, GI24648255, Length=474, Percent_Identity=28.2700421940928, Blast_Score=135, Evalue=8e-32, Organism=Drosophila melanogaster, GI21356441, Length=474, Percent_Identity=26.5822784810127, Blast_Score=128, Evalue=1e-29, Organism=Drosophila melanogaster, GI21356947, Length=501, Percent_Identity=26.1477045908184, Blast_Score=127, Evalue=1e-29, Organism=Drosophila melanogaster, GI24653035, Length=470, Percent_Identity=25.531914893617, Blast_Score=123, Evalue=3e-28, Organism=Drosophila melanogaster, GI19922652, Length=352, Percent_Identity=30.3977272727273, Blast_Score=121, Evalue=8e-28, Organism=Drosophila melanogaster, GI161076582, Length=477, Percent_Identity=25.1572327044025, Blast_Score=121, Evalue=9e-28, Organism=Drosophila melanogaster, GI24581924, Length=509, Percent_Identity=25.5402750491159, Blast_Score=118, Evalue=8e-27, Organism=Drosophila melanogaster, GI21358303, Length=321, Percent_Identity=28.0373831775701, Blast_Score=115, Evalue=5e-26, Organism=Drosophila melanogaster, GI24648257, Length=348, Percent_Identity=30.1724137931034, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI281365686, Length=344, Percent_Identity=26.453488372093, Blast_Score=109, Evalue=5e-24, Organism=Drosophila melanogaster, GI20130357, Length=347, Percent_Identity=29.1066282420749, Blast_Score=108, Evalue=1e-23, Organism=Drosophila melanogaster, GI20130353, Length=541, Percent_Identity=23.4750462107209, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI28573631, Length=541, Percent_Identity=23.4750462107209, Blast_Score=102, Evalue=8e-22, Organism=Drosophila melanogaster, GI24656500, Length=354, Percent_Identity=27.4011299435028, Blast_Score=101, Evalue=9e-22, Organism=Drosophila melanogaster, GI24667955, Length=371, Percent_Identity=26.9541778975741, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI62472339, Length=371, Percent_Identity=26.9541778975741, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24667959, Length=371, Percent_Identity=26.9541778975741, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24666501, Length=199, Percent_Identity=29.1457286432161, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24666497, Length=199, Percent_Identity=29.1457286432161, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI281366413, Length=199, Percent_Identity=29.1457286432161, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 - InterPro: IPR023015 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 50903; Mature: 50772
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGRHVTDAAALAFGEREYSLNELDALASGMATSLEQRGVRAGDRVAMMSSNRPEFVAA CCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHH LRGIWNLGAAAVLISPAWKHAEVAHALELTRPSHAVGDHPVLAEHMPMLHLDEPVTPGRR HHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEECCCCCCCCCC EFDAVDPGADALFVFSSGTTGMPKAVRHTHGAFAAAVRHWRDALELSSADRMQIMTPPSH CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHH ILGLLNIVMALETGTWIRLHPRFDIDTMLHHVESDRITIEMAVAPIALALAAHPKLESYD HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCC LSSLRYIMWCATPVTKSVADDVTRRTGVEWVAAYGTTELPVIAANPVTGARLDTVGKPVP HHHHEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCCCCHHHCCCCCC GVRVRIVSLDDGTPLGPGEVGEIQVRSDSVMAGYLPREATSAAFADGWYRTGDVGRLDAE CCEEEEEEECCCCCCCCCCCCEEEEECCCEEECCCCCHHHHHHHHCCCEECCCCCEECCC GWLRITDRSKEMIKVRGFQVAPAEVEAVLHGHPAVEDCAVFGEPHPTDGEAVVAAVTTNS CEEEEECCCCEEEEECCCEECHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEEEEECCC DVPADELTELVAGTLASYKRPSRVVFVPAIPRLPSGKVLRRVLKEQHGCTSDS CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDGRHVTDAAALAFGEREYSLNELDALASGMATSLEQRGVRAGDRVAMMSSNRPEFVAA CCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHH LRGIWNLGAAAVLISPAWKHAEVAHALELTRPSHAVGDHPVLAEHMPMLHLDEPVTPGRR HHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCHHHCCCEEECCCCCCCCCC EFDAVDPGADALFVFSSGTTGMPKAVRHTHGAFAAAVRHWRDALELSSADRMQIMTPPSH CCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHH ILGLLNIVMALETGTWIRLHPRFDIDTMLHHVESDRITIEMAVAPIALALAAHPKLESYD HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCCCC LSSLRYIMWCATPVTKSVADDVTRRTGVEWVAAYGTTELPVIAANPVTGARLDTVGKPVP HHHHEEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEECCCCCCCHHHCCCCCC GVRVRIVSLDDGTPLGPGEVGEIQVRSDSVMAGYLPREATSAAFADGWYRTGDVGRLDAE CCEEEEEEECCCCCCCCCCCCEEEEECCCEEECCCCCHHHHHHHHCCCEECCCCCEECCC GWLRITDRSKEMIKVRGFQVAPAEVEAVLHGHPAVEDCAVFGEPHPTDGEAVVAAVTTNS CEEEEECCCCEEEEECCCEECHHHHHHHHCCCCCHHHHHHCCCCCCCCCCEEEEEEECCC DVPADELTELVAGTLASYKRPSRVVFVPAIPRLPSGKVLRRVLKEQHGCTSDS CCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA