| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800779
Identifier: 108800779
GI number: 108800779
Start: 4060035
End: 4060859
Strand: Reverse
Name: 108800779
Synonym: Mmcs_3814
Alternate gene names: NA
Gene position: 4060859-4060035 (Counterclockwise)
Preceding gene: 108800780
Following gene: 108800778
Centisome position: 71.18
GC content: 63.64
Gene sequence:
>825_bases GTGCTTGTCGGGCCGGTGTCAGCGTACCGCTCACCGGCTCTCTCACAGATGGAGACCGATAACCGGATGAGTGATTACGC GCCCCTGTACGGCGAAGTGTGGGGAGACCCCCGATGGCGGCAACTGAGCAAGACCGCCCAGTGGCTGTACCTGATGCTGA TGTCGTCGCCGAGCCGCAACGCGGCGGGCATCGTGCAGATGCAGCCCATCGGGTGGGCGAACTGCGCGGTCGACGCGACG GTCGATGAGATGCACGACGCGATAGGCGAATTGGTCGCGCAGAGGTACATCGACGTGGACGACGACACCCAGGAAGTGAT CCTGCTGGGCTTCATCGAGAACGACGCGATCCGCAACCCGACGTTCTACGTGTCGTCGCTCAAGCACGCCCGCAACTGCC AGTCGCCCCGGCTGCGCGCCGTCCTCTTCAAAGCCGTGCAGGGTGTCCACCCGCCGGACCTGTCGTGCTTCAAAGCCGAG AAGGTGCGCGAGCGGAGACAGGCCGGGATCGACGCCGCCTACGACGCCTTCGCTGAGCGGGTCCAACGCGACGCAGCCGC AGACCTGAATCTGCCTGCTGTCACGTTCAATTCTTCTCCCTTACCTGCATCTGTAGCCGCAACCACAACCGCATCCGTAA CCACAACCACAACCAGAGGGGATGCGATGGGGGATGCGATGGGGGATCAAACGATGGGGCATCGGATGGGGGATGCGATG GGGGATGTCATGTGCAGCATGCACCCCGATCAACCAGCAGTCGACGGCTCCAAGTGGTGCGCGGACTGCCTTGAGCGCGA GCGCCGTTGGCAGGGTCAATCGTGA
Upstream 100 bases:
>100_bases ACGTGACTGAACGAGAGAGCGGCCGGGGCACACCACACCCCGGCCGCTCCACCCTCATCACATCCGCGTTGCCAGCGGAG ACCACAACCACACCGCACGA
Downstream 100 bases:
>100_bases CCGGCCGATGGCGTTGTGGGCGCTGCGGCCACGACATCGCCCATCACGGCCTGTACCGCGACCCGGTGTGCGTCGGGAAC ATCGCCGACGACGATCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 274
Protein sequence:
>274_residues MLVGPVSAYRSPALSQMETDNRMSDYAPLYGEVWGDPRWRQLSKTAQWLYLMLMSSPSRNAAGIVQMQPIGWANCAVDAT VDEMHDAIGELVAQRYIDVDDDTQEVILLGFIENDAIRNPTFYVSSLKHARNCQSPRLRAVLFKAVQGVHPPDLSCFKAE KVRERRQAGIDAAYDAFAERVQRDAAADLNLPAVTFNSSPLPASVAATTTASVTTTTTRGDAMGDAMGDQTMGHRMGDAM GDVMCSMHPDQPAVDGSKWCADCLERERRWQGQS
Sequences:
>Translated_274_residues MLVGPVSAYRSPALSQMETDNRMSDYAPLYGEVWGDPRWRQLSKTAQWLYLMLMSSPSRNAAGIVQMQPIGWANCAVDAT VDEMHDAIGELVAQRYIDVDDDTQEVILLGFIENDAIRNPTFYVSSLKHARNCQSPRLRAVLFKAVQGVHPPDLSCFKAE KVRERRQAGIDAAYDAFAERVQRDAAADLNLPAVTFNSSPLPASVAATTTASVTTTTTRGDAMGDAMGDQTMGHRMGDAM GDVMCSMHPDQPAVDGSKWCADCLERERRWQGQS >Mature_274_residues MLVGPVSAYRSPALSQMETDNRMSDYAPLYGEVWGDPRWRQLSKTAQWLYLMLMSSPSRNAAGIVQMQPIGWANCAVDAT VDEMHDAIGELVAQRYIDVDDDTQEVILLGFIENDAIRNPTFYVSSLKHARNCQSPRLRAVLFKAVQGVHPPDLSCFKAE KVRERRQAGIDAAYDAFAERVQRDAAADLNLPAVTFNSSPLPASVAATTTASVTTTTTRGDAMGDAMGDQTMGHRMGDAM GDVMCSMHPDQPAVDGSKWCADCLERERRWQGQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30151; Mature: 30151
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVGPVSAYRSPALSQMETDNRMSDYAPLYGEVWGDPRWRQLSKTAQWLYLMLMSSPSRN CCCCCCHHHHCCHHHHHHHCCCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC AAGIVQMQPIGWANCAVDATVDEMHDAIGELVAQRYIDVDDDTQEVILLGFIENDAIRNP CCCEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCC TFYVSSLKHARNCQSPRLRAVLFKAVQGVHPPDLSCFKAEKVRERRQAGIDAAYDAFAER HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH VQRDAAADLNLPAVTFNSSPLPASVAATTTASVTTTTTRGDAMGDAMGDQTMGHRMGDAM HHHHHHCCCCCCEEEECCCCCCCHHHHCCCCEEEEECCCCCHHHHHHCHHHHHHHHHHHH GDVMCSMHPDQPAVDGSKWCADCLERERRWQGQS HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLVGPVSAYRSPALSQMETDNRMSDYAPLYGEVWGDPRWRQLSKTAQWLYLMLMSSPSRN CCCCCCHHHHCCHHHHHHHCCCHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCC AAGIVQMQPIGWANCAVDATVDEMHDAIGELVAQRYIDVDDDTQEVILLGFIENDAIRNP CCCEEEECCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCC TFYVSSLKHARNCQSPRLRAVLFKAVQGVHPPDLSCFKAEKVRERRQAGIDAAYDAFAER HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHH VQRDAAADLNLPAVTFNSSPLPASVAATTTASVTTTTTRGDAMGDAMGDQTMGHRMGDAM HHHHHHCCCCCCEEEECCCCCCCHHHHCCCCEEEEECCCCCHHHHHHCHHHHHHHHHHHH GDVMCSMHPDQPAVDGSKWCADCLERERRWQGQS HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA