| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800767
Identifier: 108800767
GI number: 108800767
Start: 4054440
End: 4054799
Strand: Reverse
Name: 108800767
Synonym: Mmcs_3802
Alternate gene names: NA
Gene position: 4054799-4054440 (Counterclockwise)
Preceding gene: 108800768
Following gene: 108800766
Centisome position: 71.07
GC content: 70.0
Gene sequence:
>360_bases ATGCCGAGGGCACCGAAGATGTGCGGGCGCAACGGCTGCCGCACCATCGTCCACCCGCCGCGCAAGCACTGCCCCGAGCA CAGCGGATGGAACACCAGCCCGCGCACCGCATCCGCAGCGGCCACTGAGCGCAGCTACTGGCGCACGGTGATCAGGCCGC AGGCCCTGGCCCGCGACAACCATCAGTGCCAACTCCGGTTCCCCGGTATCTGCACAGGCCACGCAACCGAGGTTGATCAC ATCGTCGCGGTATCCGACGGCGGCGCTGATGAACTCGACAACGCCCGCTCGGCATGCCGCCGGTGTCATGCCCGCCGCAC CGCTCAGGACGCGGCCCGCGCCAGCCACCGCGCTCGATAG
Upstream 100 bases:
>100_bases ACGAACTGGCCCGAGCCAAGGCCGCCCGCAACAGGTTCCGCACACCGGCGTCGGATCGACGCACCGGCGGCCCGAACGCG GTGAAGGCCAGACGGTCCTG
Downstream 100 bases:
>100_bases TGGGAATTTCGCTAACGCGTTAGCGAAACTCCGACCTCGCCGGGTGCCGACGCCAGAATTACCCACAGCGGGTAAGCCTG GCGTGGAGGAGAAGTGCCCA
Product: HNH endonuclease
Products: NA
Alternate protein names: Bacteriophage Protein
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MPRAPKMCGRNGCRTIVHPPRKHCPEHSGWNTSPRTASAAATERSYWRTVIRPQALARDNHQCQLRFPGICTGHATEVDH IVAVSDGGADELDNARSACRRCHARRTAQDAARASHRAR
Sequences:
>Translated_119_residues MPRAPKMCGRNGCRTIVHPPRKHCPEHSGWNTSPRTASAAATERSYWRTVIRPQALARDNHQCQLRFPGICTGHATEVDH IVAVSDGGADELDNARSACRRCHARRTAQDAARASHRAR >Mature_118_residues PRAPKMCGRNGCRTIVHPPRKHCPEHSGWNTSPRTASAAATERSYWRTVIRPQALARDNHQCQLRFPGICTGHATEVDHI VAVSDGGADELDNARSACRRCHARRTAQDAARASHRAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13188; Mature: 13057
Theoretical pI: Translated: 10.74; Mature: 10.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRAPKMCGRNGCRTIVHPPRKHCPEHSGWNTSPRTASAAATERSYWRTVIRPQALARDN CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCC HQCQLRFPGICTGHATEVDHIVAVSDGGADELDNARSACRRCHARRTAQDAARASHRAR CEEEEECCCEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PRAPKMCGRNGCRTIVHPPRKHCPEHSGWNTSPRTASAAATERSYWRTVIRPQALARDN CCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHCCC HQCQLRFPGICTGHATEVDHIVAVSDGGADELDNARSACRRCHARRTAQDAARASHRAR CEEEEECCCEECCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA