| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800758
Identifier: 108800758
GI number: 108800758
Start: 4047205
End: 4047915
Strand: Reverse
Name: 108800758
Synonym: Mmcs_3793
Alternate gene names: NA
Gene position: 4047915-4047205 (Counterclockwise)
Preceding gene: 108800760
Following gene: 108800757
Centisome position: 70.95
GC content: 63.99
Gene sequence:
>711_bases ATGACGAGACGTGTTGACGGCGAAGTGATCCTGTTGTGGACCTTGCCGGCGGTGGTGCTCATCTGGGTATCGGCGTTCTT CCTGTTTCCCGGCTTCGTCCACCCCATGTCGCCGACCATGTCGGCGGAGGAGGTCGCGGCGTTCTATCGCGATGAGACGG CACGGATCCGGTACAGCATGATCCTGTTCAACTGGTTCGGCGTGGGCCTGATACCCCTGGTGATGCTCATCGTGGTGCAG GTGCGGAGGATGGCTCACCGCACGCCGATCCTGTCCTACAGCCTGCTCGCCTGCTCCGCGGGCCCGCCCACGCTCTTCCT GGTCGCCAACATGTTCTGGTTGCTCGGCGCCTTCCGCCCGGAACGCGCCCCGGAATTGACGCAGTTGTTCAACGATCTCG CCTGGATCACCTTCACCATCCTGGTTCCGTACCTGATCGCCCAATGCCTGCTGCTGGCCCTCGCGATCTACTGGGATCAC CAGGCGCAACCGGTCTTCACACCGTGGGTGGCACACTTCAATCTCCTCGTCGCGGCCGCGCTGGCGCCTGCCGCCTTCAC CGCGCTGGCCTGGACCGGGCCGTTTGCCTGGGACGGGGTGCTGTCGTTCTGGCTCAAGAACGTCGCCATCGCTTTGTGGA TCGTCGTCATGGGACTCGTTGTGGCCCAGACCATCCGACGCCAGCGGACGCAAGAGCGGGTCGTCGCATGA
Upstream 100 bases:
>100_bases GGCACCCGCTCAGGATAGCCGATCGGCTATTGACACGGGTAGCCGATCGGCTAGCCTGGGTAACCGTCGGGGCAACGGGT GCTCAGGGTGAGGGGTTGCG
Downstream 100 bases:
>100_bases GTCCGCCGATTGTCGAGCCGCCGCCCGGTTCCGTCATCGGCCGGTTCTTCTGGAACGTCCGCCACCACCCCAAGAAGGAG TTGTGGTTCGCGTGGTGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 235
Protein sequence:
>236_residues MTRRVDGEVILLWTLPAVVLIWVSAFFLFPGFVHPMSPTMSAEEVAAFYRDETARIRYSMILFNWFGVGLIPLVMLIVVQ VRRMAHRTPILSYSLLACSAGPPTLFLVANMFWLLGAFRPERAPELTQLFNDLAWITFTILVPYLIAQCLLLALAIYWDH QAQPVFTPWVAHFNLLVAAALAPAAFTALAWTGPFAWDGVLSFWLKNVAIALWIVVMGLVVAQTIRRQRTQERVVA
Sequences:
>Translated_236_residues MTRRVDGEVILLWTLPAVVLIWVSAFFLFPGFVHPMSPTMSAEEVAAFYRDETARIRYSMILFNWFGVGLIPLVMLIVVQ VRRMAHRTPILSYSLLACSAGPPTLFLVANMFWLLGAFRPERAPELTQLFNDLAWITFTILVPYLIAQCLLLALAIYWDH QAQPVFTPWVAHFNLLVAAALAPAAFTALAWTGPFAWDGVLSFWLKNVAIALWIVVMGLVVAQTIRRQRTQERVVA >Mature_235_residues TRRVDGEVILLWTLPAVVLIWVSAFFLFPGFVHPMSPTMSAEEVAAFYRDETARIRYSMILFNWFGVGLIPLVMLIVVQV RRMAHRTPILSYSLLACSAGPPTLFLVANMFWLLGAFRPERAPELTQLFNDLAWITFTILVPYLIAQCLLLALAIYWDHQ AQPVFTPWVAHFNLLVAAALAPAAFTALAWTGPFAWDGVLSFWLKNVAIALWIVVMGLVVAQTIRRQRTQERVVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26661; Mature: 26530
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRRVDGEVILLWTLPAVVLIWVSAFFLFPGFVHPMSPTMSAEEVAAFYRDETARIRYSM CCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHH ILFNWFGVGLIPLVMLIVVQVRRMAHRTPILSYSLLACSAGPPTLFLVANMFWLLGAFRP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC ERAPELTQLFNDLAWITFTILVPYLIAQCLLLALAIYWDHQAQPVFTPWVAHFNLLVAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LAPAAFTALAWTGPFAWDGVLSFWLKNVAIALWIVVMGLVVAQTIRRQRTQERVVA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRRVDGEVILLWTLPAVVLIWVSAFFLFPGFVHPMSPTMSAEEVAAFYRDETARIRYSM CCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCHHHHHHHHH ILFNWFGVGLIPLVMLIVVQVRRMAHRTPILSYSLLACSAGPPTLFLVANMFWLLGAFRP HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC ERAPELTQLFNDLAWITFTILVPYLIAQCLLLALAIYWDHQAQPVFTPWVAHFNLLVAAA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LAPAAFTALAWTGPFAWDGVLSFWLKNVAIALWIVVMGLVVAQTIRRQRTQERVVA HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA