| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800746
Identifier: 108800746
GI number: 108800746
Start: 4034635
End: 4035624
Strand: Reverse
Name: 108800746
Synonym: Mmcs_3781
Alternate gene names: NA
Gene position: 4035624-4034635 (Counterclockwise)
Preceding gene: 108800747
Following gene: 108800745
Centisome position: 70.73
GC content: 67.68
Gene sequence:
>990_bases GTGGCCACACTCGACGAGTTCCGCCGCGCGGGGGAGTCCCTGCGCAACTGGGGACGCTGGGGCGACGCCGACGAACTCGG CACGCTGAACTTCATCACCGCCGACAAGGTGGCCGAGGGGGCGCGCCTGGTGCGGCACGGCAAGGTCTTTCCCCTCGGCG TCGACTTCGGATCCTCGGGCCCGCAGGGTGCGTTCCAGTACCGGCCCAACCCGATGCACGTGATGACCGTCGACGGTGGC GACGCCAACACCCTGGTGCAGTACGGCCCGCAGTGGTTGAAGAACACCGTCGCCCAGCAGCTCGCCGGGTACTTCGTGGA CAACCCGTTCCGGTTCAACGACGACATGATCATCATGCCGCTGCAGGCCGCCACCCAGTGGGATGCGCTGTCGCACGTCT ACTACGACGACAAGCTCTACAACGGGTTCCCGGCCGATTCGGTGACCAGCCAGGGTGCCTTCCACTGCGGTATCGACAAG GTCGACGGCAAGGGCATCACCTCGCGCGGCGTACTGCTCGACCTGGTGCGCCACCGCGGGGCCGACGTGTTCGTCGAACA CGGTGAGCCGATCACCCCGGACGAACTCGACGAAGTGGCCCGCGCTCAGGGGGTTTCGGTCGGCACCGGTGACATCGTGC TGATCCGGACCGGATGGTGGGACAGGTTCCTGGAGGCCGGCGACGGCACCGAACCGTACGCCGGGCTGGACTGGCGCTGC GCATCGTGGCTGCACGAACGTGAGATCGCCGCGGTGGCCGCCGACAACCTCATGGTCGAGGACCCGGTGTCCGGCGTCGA GGGCACGATCCTGCCGATGCACATGCTGTGCCTGCGCGATATGGGGCTGATGCTCGGGGAGTACTGGGACCTCGGCGCGC TGGCCGCCGACTGCGCCGCCGACGGCGTGTACGAATTCCAGCTCATCGCACCGCCGTTGCGGGTCACCGGTGCGGTGGGA GCACCGCTGAATCCGATCGCGATCAAGTGA
Upstream 100 bases:
>100_bases GCCGCCAGTTACATCACCGGCCAGGTCATCTGGGTCGACGGTGGGAACCTCGCCGGCCGGGTGGCCGCGAGTCTAGACGC GACTTCGGAAGGGAAGTGAC
Downstream 100 bases:
>100_bases CGGGGGAGACGATGACCGACCCAGGTGAGATCCCATTCGTCGTCGGGCTCGGCGGCACCCTGCGCGCCAACTCGTCGACC GAGCGGGCGGTGCGGTACTG
Product: hypothetical protein
Products: NA
Alternate protein names: Cyclase Family Protein; Polyketide Cyclase; Metal-Dependent Hydrolase; Yclase SCIF3.09c; LOW QUALITY PROTEIN Cyclase; Exported Cyclase; Cyclase Family; Conserved Protein; Metal-Dependent Cyclase Family Protein
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MATLDEFRRAGESLRNWGRWGDADELGTLNFITADKVAEGARLVRHGKVFPLGVDFGSSGPQGAFQYRPNPMHVMTVDGG DANTLVQYGPQWLKNTVAQQLAGYFVDNPFRFNDDMIIMPLQAATQWDALSHVYYDDKLYNGFPADSVTSQGAFHCGIDK VDGKGITSRGVLLDLVRHRGADVFVEHGEPITPDELDEVARAQGVSVGTGDIVLIRTGWWDRFLEAGDGTEPYAGLDWRC ASWLHEREIAAVAADNLMVEDPVSGVEGTILPMHMLCLRDMGLMLGEYWDLGALAADCAADGVYEFQLIAPPLRVTGAVG APLNPIAIK
Sequences:
>Translated_329_residues MATLDEFRRAGESLRNWGRWGDADELGTLNFITADKVAEGARLVRHGKVFPLGVDFGSSGPQGAFQYRPNPMHVMTVDGG DANTLVQYGPQWLKNTVAQQLAGYFVDNPFRFNDDMIIMPLQAATQWDALSHVYYDDKLYNGFPADSVTSQGAFHCGIDK VDGKGITSRGVLLDLVRHRGADVFVEHGEPITPDELDEVARAQGVSVGTGDIVLIRTGWWDRFLEAGDGTEPYAGLDWRC ASWLHEREIAAVAADNLMVEDPVSGVEGTILPMHMLCLRDMGLMLGEYWDLGALAADCAADGVYEFQLIAPPLRVTGAVG APLNPIAIK >Mature_328_residues ATLDEFRRAGESLRNWGRWGDADELGTLNFITADKVAEGARLVRHGKVFPLGVDFGSSGPQGAFQYRPNPMHVMTVDGGD ANTLVQYGPQWLKNTVAQQLAGYFVDNPFRFNDDMIIMPLQAATQWDALSHVYYDDKLYNGFPADSVTSQGAFHCGIDKV DGKGITSRGVLLDLVRHRGADVFVEHGEPITPDELDEVARAQGVSVGTGDIVLIRTGWWDRFLEAGDGTEPYAGLDWRCA SWLHEREIAAVAADNLMVEDPVSGVEGTILPMHMLCLRDMGLMLGEYWDLGALAADCAADGVYEFQLIAPPLRVTGAVGA PLNPIAIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35897; Mature: 35766
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLDEFRRAGESLRNWGRWGDADELGTLNFITADKVAEGARLVRHGKVFPLGVDFGSSG CCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEECCCCCC PQGAFQYRPNPMHVMTVDGGDANTLVQYGPQWLKNTVAQQLAGYFVDNPFRFNDDMIIMP CCCCEEECCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCEEEEE LQAATQWDALSHVYYDDKLYNGFPADSVTSQGAFHCGIDKVDGKGITSRGVLLDLVRHRG CCCCCHHHHHHHEEECCHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCC ADVFVEHGEPITPDELDEVARAQGVSVGTGDIVLIRTGWWDRFLEAGDGTEPYAGLDWRC CEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCHHH ASWLHEREIAAVAADNLMVEDPVSGVEGTILPMHMLCLRDMGLMLGEYWDLGALAADCAA HHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC DGVYEFQLIAPPLRVTGAVGAPLNPIAIK CCCEEEEEECCCCEECCCCCCCCCCCCCC >Mature Secondary Structure ATLDEFRRAGESLRNWGRWGDADELGTLNFITADKVAEGARLVRHGKVFPLGVDFGSSG CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCEEEEEECCCCCC PQGAFQYRPNPMHVMTVDGGDANTLVQYGPQWLKNTVAQQLAGYFVDNPFRFNDDMIIMP CCCCEEECCCCEEEEEECCCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCEEECCCEEEEE LQAATQWDALSHVYYDDKLYNGFPADSVTSQGAFHCGIDKVDGKGITSRGVLLDLVRHRG CCCCCHHHHHHHEEECCHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHCC ADVFVEHGEPITPDELDEVARAQGVSVGTGDIVLIRTGWWDRFLEAGDGTEPYAGLDWRC CEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHCCCCCCCCCCCCHHH ASWLHEREIAAVAADNLMVEDPVSGVEGTILPMHMLCLRDMGLMLGEYWDLGALAADCAA HHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHC DGVYEFQLIAPPLRVTGAVGAPLNPIAIK CCCEEEEEECCCCEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA