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The map label for this gene is mmgC [H]

Identifier: 108800719

GI number: 108800719

Start: 4006008

End: 4007189

Strand: Reverse

Name: mmgC [H]

Synonym: Mmcs_3754

Alternate gene names: 108800719

Gene position: 4007189-4006008 (Counterclockwise)

Preceding gene: 108800723

Following gene: 108800718

Centisome position: 70.23

GC content: 69.2

Gene sequence:

>1182_bases
GTGCAACTGACTTTCGACGCCGACGTCGAAGCCTTCCGGGCTGAGTTCGTGGCATTCCTCGACGCCAACCAACCCGACGA
GGCCGACACGGCGCAGCGCCCGCGGTCGTCGGCCGACCTGCCAGACTGGGCCCGTCGCTGGCAGCGCCTGTTGTTCGACA
ACGGCTGGCTGCTGCCCGGCCATCCGCCGGAGTTCGGCGGCCGCAACGCCACCATCCTGCAGCAGTACGCGTATCAGCTC
GAACTGTCGCGGCGCCGCATCTACCACAGCTTCAACCCGCAGGGAGTGGGGATCATCGCCGCGTCGCTGATCTCCTTCGG
CACGCCCGAACAGCAGCAGAAGTGGGCGGTGCCGATCCTGCGCGCCGAGATGACCGCCGCGCTGGGTATGAGCGAACCGG
GGGCCGGCTCCGACCTCGCATCACTGCGCACCCGGGCGGTGCGCGCACCGGATGCGGCACACTACGTCGTCAACGGGCAG
AAGGTCTGGACGTCGGGGGCGAGCGAAGCCGACGTCATCCTCACCTTCGTGCGGACCGATCCGGATGCGGCCAAACACCG
CGGGATCAGCGTGCTGATGATCCCCACCGACTCGCCCGGCGTGATCCGCCGGCCGTTCGCCTCGATCTGCGACGCCGGGG
AACTCGACTTCAACGAGGTCTTCTTCAACGACGTCGAGGTGCCGGTGGAGAACCTGATCGGTCCCGAGAACGACGGCTGG
CGGGTGGCCAACGGATCGCTGGGACACGAGCGGACGATGCTGTGGCTCAGCTACGCCGACCGCCTGCAGGACCTCATCGA
CGACTTCCCGGCCCACACCGCACTGGACCGGGACCGCTACGCCACCATGGTGATCGACTCGATGGCGGTGCGCCTGCTCG
GTTCGGTCGCGCTCGCCAGGGCCGCCAGGGGAGTCGACGACGCCGGGGCGCTGTCGGTGCTCAAGCTGCTCGGCTCCGAG
ACCGGGCAGCGGGCCACCGAACACGCGCTGGAGGCGGTCGGGGTGGACGGGCTGGCCCACCCCACCACCGTCGGGCCGTG
GACCCCGCTCAATCTCGACGCCTACTCGTGCGGGTGGTTCGAGCGGTACACCCGGACCTTCGCGGGGACCATCGCCGGCG
GGACTTCCGAGATCCAACGCAACATCATCGCCCAGCGCCTGCTCGGGCTGCCCAGGAACTAG

Upstream 100 bases:

>100_bases
GGCCCACGTGTCGGAGATTGTGCCTTCCTCATGGCGAGAATAGTATTCTCAGATTGGGCATTATTGAAGCGTTTCCCCAG
AGAGCAAACCCGGGAGTGCC

Downstream 100 bases:

>100_bases
AGGAGCAACGTGTACATCGACTACGAGGTCGCCGACAAGATCGCGACCATATCGCTGAACCGCCCCGAGGTGGCCAACGC
GCAGAACACCGAACTGCTCG

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MQLTFDADVEAFRAEFVAFLDANQPDEADTAQRPRSSADLPDWARRWQRLLFDNGWLLPGHPPEFGGRNATILQQYAYQL
ELSRRRIYHSFNPQGVGIIAASLISFGTPEQQQKWAVPILRAEMTAALGMSEPGAGSDLASLRTRAVRAPDAAHYVVNGQ
KVWTSGASEADVILTFVRTDPDAAKHRGISVLMIPTDSPGVIRRPFASICDAGELDFNEVFFNDVEVPVENLIGPENDGW
RVANGSLGHERTMLWLSYADRLQDLIDDFPAHTALDRDRYATMVIDSMAVRLLGSVALARAARGVDDAGALSVLKLLGSE
TGQRATEHALEAVGVDGLAHPTTVGPWTPLNLDAYSCGWFERYTRTFAGTIAGGTSEIQRNIIAQRLLGLPRN

Sequences:

>Translated_393_residues
MQLTFDADVEAFRAEFVAFLDANQPDEADTAQRPRSSADLPDWARRWQRLLFDNGWLLPGHPPEFGGRNATILQQYAYQL
ELSRRRIYHSFNPQGVGIIAASLISFGTPEQQQKWAVPILRAEMTAALGMSEPGAGSDLASLRTRAVRAPDAAHYVVNGQ
KVWTSGASEADVILTFVRTDPDAAKHRGISVLMIPTDSPGVIRRPFASICDAGELDFNEVFFNDVEVPVENLIGPENDGW
RVANGSLGHERTMLWLSYADRLQDLIDDFPAHTALDRDRYATMVIDSMAVRLLGSVALARAARGVDDAGALSVLKLLGSE
TGQRATEHALEAVGVDGLAHPTTVGPWTPLNLDAYSCGWFERYTRTFAGTIAGGTSEIQRNIIAQRLLGLPRN
>Mature_393_residues
MQLTFDADVEAFRAEFVAFLDANQPDEADTAQRPRSSADLPDWARRWQRLLFDNGWLLPGHPPEFGGRNATILQQYAYQL
ELSRRRIYHSFNPQGVGIIAASLISFGTPEQQQKWAVPILRAEMTAALGMSEPGAGSDLASLRTRAVRAPDAAHYVVNGQ
KVWTSGASEADVILTFVRTDPDAAKHRGISVLMIPTDSPGVIRRPFASICDAGELDFNEVFFNDVEVPVENLIGPENDGW
RVANGSLGHERTMLWLSYADRLQDLIDDFPAHTALDRDRYATMVIDSMAVRLLGSVALARAARGVDDAGALSVLKLLGSE
TGQRATEHALEAVGVDGLAHPTTVGPWTPLNLDAYSCGWFERYTRTFAGTIAGGTSEIQRNIIAQRLLGLPRN

Specific function: Unknown

COG id: COG1960

COG function: function code I; Acyl-CoA dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI21361497, Length=191, Percent_Identity=31.9371727748691, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI226958412, Length=390, Percent_Identity=24.1025641025641, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI76496475, Length=303, Percent_Identity=26.4026402640264, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI4557235, Length=303, Percent_Identity=26.4026402640264, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI4557231, Length=311, Percent_Identity=25.4019292604502, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI187960098, Length=311, Percent_Identity=25.4019292604502, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI226958414, Length=340, Percent_Identity=24.1176470588235, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI211971008, Length=256, Percent_Identity=28.125, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI48976061, Length=256, Percent_Identity=28.125, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI7656849, Length=302, Percent_Identity=29.1390728476821, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI4501859, Length=360, Percent_Identity=26.3888888888889, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI38505218, Length=258, Percent_Identity=27.1317829457364, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI4501857, Length=311, Percent_Identity=25.7234726688103, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4557233, Length=347, Percent_Identity=26.5129682997118, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI87081958, Length=241, Percent_Identity=27.8008298755187, Blast_Score=77, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17534899, Length=311, Percent_Identity=28.2958199356913, Blast_Score=100, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17569725, Length=355, Percent_Identity=25.3521126760563, Blast_Score=98, Evalue=6e-21,
Organism=Caenorhabditis elegans, GI17538396, Length=215, Percent_Identity=28.8372093023256, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=357, Percent_Identity=24.9299719887955, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71985184, Length=148, Percent_Identity=34.4594594594595, Blast_Score=92, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI71985192, Length=148, Percent_Identity=34.4594594594595, Blast_Score=91, Evalue=8e-19,
Organism=Caenorhabditis elegans, GI17562446, Length=305, Percent_Identity=27.2131147540984, Blast_Score=82, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI17506239, Length=358, Percent_Identity=23.463687150838, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17505929, Length=248, Percent_Identity=25.4032258064516, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17508101, Length=375, Percent_Identity=24.2666666666667, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17551932, Length=150, Percent_Identity=30, Blast_Score=79, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI32563615, Length=260, Percent_Identity=24.2307692307692, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71982178, Length=238, Percent_Identity=24.3697478991597, Blast_Score=65, Evalue=5e-11,
Organism=Drosophila melanogaster, GI281363737, Length=223, Percent_Identity=28.6995515695067, Blast_Score=110, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24666513, Length=356, Percent_Identity=26.685393258427, Blast_Score=102, Evalue=5e-22,
Organism=Drosophila melanogaster, GI21355753, Length=409, Percent_Identity=28.8508557457213, Blast_Score=101, Evalue=9e-22,
Organism=Drosophila melanogaster, GI24660351, Length=372, Percent_Identity=24.7311827956989, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI21356377, Length=311, Percent_Identity=26.3665594855305, Blast_Score=82, Evalue=7e-16,
Organism=Drosophila melanogaster, GI24646207, Length=295, Percent_Identity=27.4576271186441, Blast_Score=81, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43054; Mature: 43054

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTFDADVEAFRAEFVAFLDANQPDEADTAQRPRSSADLPDWARRWQRLLFDNGWLLPG
CEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCEECCC
HPPEFGGRNATILQQYAYQLELSRRRIYHSFNPQGVGIIAASLISFGTPEQQQKWAVPIL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHCCHHH
RAEMTAALGMSEPGAGSDLASLRTRAVRAPDAAHYVVNGQKVWTSGASEADVILTFVRTD
HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCEEECCCCCCCEEEEEEEECC
PDAAKHRGISVLMIPTDSPGVIRRPFASICDAGELDFNEVFFNDVEVPVENLIGPENDGW
CCHHHHCCCEEEEEECCCCCHHHCCHHHHCCCCCCCHHHHHHCCCCCCHHHCCCCCCCCE
RVANGSLGHERTMLWLSYADRLQDLIDDFPAHTALDRDRYATMVIDSMAVRLLGSVALAR
EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AARGVDDAGALSVLKLLGSETGQRATEHALEAVGVDGLAHPTTVGPWTPLNLDAYSCGWF
HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
ERYTRTFAGTIAGGTSEIQRNIIAQRLLGLPRN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQLTFDADVEAFRAEFVAFLDANQPDEADTAQRPRSSADLPDWARRWQRLLFDNGWLLPG
CEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCEECCC
HPPEFGGRNATILQQYAYQLELSRRRIYHSFNPQGVGIIAASLISFGTPEQQQKWAVPIL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHCCHHH
RAEMTAALGMSEPGAGSDLASLRTRAVRAPDAAHYVVNGQKVWTSGASEADVILTFVRTD
HHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEECCCEEECCCCCCCEEEEEEEECC
PDAAKHRGISVLMIPTDSPGVIRRPFASICDAGELDFNEVFFNDVEVPVENLIGPENDGW
CCHHHHCCCEEEEEECCCCCHHHCCHHHHCCCCCCCHHHHHHCCCCCCHHHCCCCCCCCE
RVANGSLGHERTMLWLSYADRLQDLIDDFPAHTALDRDRYATMVIDSMAVRLLGSVALAR
EEECCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AARGVDDAGALSVLKLLGSETGQRATEHALEAVGVDGLAHPTTVGPWTPLNLDAYSCGWF
HHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH
ERYTRTFAGTIAGGTSEIQRNIIAQRLLGLPRN
HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]