| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800697
Identifier: 108800697
GI number: 108800697
Start: 3984920
End: 3986236
Strand: Reverse
Name: 108800697
Synonym: Mmcs_3732
Alternate gene names: NA
Gene position: 3986236-3984920 (Counterclockwise)
Preceding gene: 108800698
Following gene: 108800693
Centisome position: 69.87
GC content: 67.81
Gene sequence:
>1317_bases ATGCCTTCGAGCACAACGGGTTTCGTTCCCAGCGCACCTCGCGCTGCGCGGCTCGAGGCGTGCTTCGAGGAACTCGCGGA ACTGACGGGCCAGCGCAACGCCATCGACGGGCGCATCGTGGAAATCGTGGCCGAGATCGACCGTGACCAACTGTGGGGCG CCACCGGGGCCCGCTCCATCCCCGCACTGGTGGCATGGAAACTCGGACTGTCGTCGAAGAATGCGAAAACCATCGCCGCC ATCGCCCACCGACTCGACGAGTTCCCCCGCTGCACCCAAGCCCTCCGCGAGGGCCGACTGTCACTGGATCAAGTCGGCGC CATCGCCGAACGGGCCACCACCGGATCCGATGACCACTACGCCGAACTGGCCACCCACGCCTCAGTCAGCCAACTCCGCA CCGCCATCAAACTCGAACCCCCACCCCAACCCCAACCCGAACCCGAACCTGTCAGCGATGCCGACGTCGAACCGAAACCC CTCCCCGATCCGGCAGACCTACAGCCCTCGATCACCACAACCTCCGACGAGCAGTACACCCACTGGCACATCAAGGTGCC CCACGTCGACGCGGCGAAAGTCGACGCCGCCCTGCACTCCCGCCTCGACGGGCTCATCGCCCAATGGAAACGCGACCACG GCGACCACGGCGACACCGACCACAAGGACGCCCGGGGGTTCGGCCGGCCACCGATGCCCCGGCTGGCTGACGCGTTCATG GACCTCATCGACACCGCCTGGGACGCCGAAGCCGCCCGCCGCCCGCATGGAGACCGCACCACCGTGGTCATGCACCTCGA CATCAACGACCGCATCGCCGCCCTACACCTGGGCCCGCTACTCTCGGATGCCGACCGGCGCTACCTGGGCTGCGACGCCA CCTGCGAAGTGTGGTTCGAACGCAACGGCCAACCCATCGGCACCGGACGCACCACCCGCCTGATCAACCGCCGCCTACGG CGCGCCCTCGAACACCGCAACCGCACCTGCGTGGTCCCCGGCTGCGAATCCACCCGCGGACTGCACGCCCACCACATCCA GCACTGGGAAGACGGCGGACCCACCGACCTCGACAACCTCGTCCTGGTCTGCCCCTACCACCACCGCCTGCACCACCGTG GCATCATCACCATCACCGGACCCGCATCAAAGCTCACCGTCACCGACGCCACCGGCCGACAACTGCACTCGGGCTCGTTG GCGCGTCCACCCACCACACCACCACCCACCGTGCCGCTCTACCGCGGACCATCCGGCGAGCGCGCCGACTGGTGGTGGTA CACACCCTTCCAACCCCCACCCCAAGCAGCGAACTGA
Upstream 100 bases:
>100_bases TCCGCGGCGCGGCGGCCGACTGGGACGGCACCGATCCGATCCGTGTGTTCGGCTGACCGGGCCGCTGATTCGTGTCAGAC CGTCCTGTCATGATGGTGTC
Downstream 100 bases:
>100_bases TCACCCCGACGACCTCCGCAGCGCACCTGAGATCTCAACCGAACTCCGCGCACAGTGATGCCACGAAATCCTTTGTACGG CAACGGGAGTCCCGCCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 438; Mature: 437
Protein sequence:
>438_residues MPSSTTGFVPSAPRAARLEACFEELAELTGQRNAIDGRIVEIVAEIDRDQLWGATGARSIPALVAWKLGLSSKNAKTIAA IAHRLDEFPRCTQALREGRLSLDQVGAIAERATTGSDDHYAELATHASVSQLRTAIKLEPPPQPQPEPEPVSDADVEPKP LPDPADLQPSITTTSDEQYTHWHIKVPHVDAAKVDAALHSRLDGLIAQWKRDHGDHGDTDHKDARGFGRPPMPRLADAFM DLIDTAWDAEAARRPHGDRTTVVMHLDINDRIAALHLGPLLSDADRRYLGCDATCEVWFERNGQPIGTGRTTRLINRRLR RALEHRNRTCVVPGCESTRGLHAHHIQHWEDGGPTDLDNLVLVCPYHHRLHHRGIITITGPASKLTVTDATGRQLHSGSL ARPPTTPPPTVPLYRGPSGERADWWWYTPFQPPPQAAN
Sequences:
>Translated_438_residues MPSSTTGFVPSAPRAARLEACFEELAELTGQRNAIDGRIVEIVAEIDRDQLWGATGARSIPALVAWKLGLSSKNAKTIAA IAHRLDEFPRCTQALREGRLSLDQVGAIAERATTGSDDHYAELATHASVSQLRTAIKLEPPPQPQPEPEPVSDADVEPKP LPDPADLQPSITTTSDEQYTHWHIKVPHVDAAKVDAALHSRLDGLIAQWKRDHGDHGDTDHKDARGFGRPPMPRLADAFM DLIDTAWDAEAARRPHGDRTTVVMHLDINDRIAALHLGPLLSDADRRYLGCDATCEVWFERNGQPIGTGRTTRLINRRLR RALEHRNRTCVVPGCESTRGLHAHHIQHWEDGGPTDLDNLVLVCPYHHRLHHRGIITITGPASKLTVTDATGRQLHSGSL ARPPTTPPPTVPLYRGPSGERADWWWYTPFQPPPQAAN >Mature_437_residues PSSTTGFVPSAPRAARLEACFEELAELTGQRNAIDGRIVEIVAEIDRDQLWGATGARSIPALVAWKLGLSSKNAKTIAAI AHRLDEFPRCTQALREGRLSLDQVGAIAERATTGSDDHYAELATHASVSQLRTAIKLEPPPQPQPEPEPVSDADVEPKPL PDPADLQPSITTTSDEQYTHWHIKVPHVDAAKVDAALHSRLDGLIAQWKRDHGDHGDTDHKDARGFGRPPMPRLADAFMD LIDTAWDAEAARRPHGDRTTVVMHLDINDRIAALHLGPLLSDADRRYLGCDATCEVWFERNGQPIGTGRTTRLINRRLRR ALEHRNRTCVVPGCESTRGLHAHHIQHWEDGGPTDLDNLVLVCPYHHRLHHRGIITITGPASKLTVTDATGRQLHSGSLA RPPTTPPPTVPLYRGPSGERADWWWYTPFQPPPQAAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48301; Mature: 48169
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSTTGFVPSAPRAARLEACFEELAELTGQRNAIDGRIVEIVAEIDRDQLWGATGARSI CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC PALVAWKLGLSSKNAKTIAAIAHRLDEFPRCTQALREGRLSLDQVGAIAERATTGSDDHY HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHH AELATHASVSQLRTAIKLEPPPQPQPEPEPVSDADVEPKPLPDPADLQPSITTTSDEQYT HHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE HWHIKVPHVDAAKVDAALHSRLDGLIAQWKRDHGDHGDTDHKDARGFGRPPMPRLADAFM EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH DLIDTAWDAEAARRPHGDRTTVVMHLDINDRIAALHLGPLLSDADRRYLGCDATCEVWFE HHHHHHCCHHHHHCCCCCCEEEEEEECCCCCEEEEECCCHHCCCCCCEECCCCEEEEEEC RNGQPIGTGRTTRLINRRLRRALEHRNRTCVVPGCESTRGLHAHHIQHWEDGGPTDLDNL CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCE VLVCPYHHRLHHRGIITITGPASKLTVTDATGRQLHSGSLARPPTTPPPTVPLYRGPSGE EEECCCHHHHHCCCEEEEECCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCEEECCCCC RADWWWYTPFQPPPQAAN CCCEEEECCCCCCCCCCC >Mature Secondary Structure PSSTTGFVPSAPRAARLEACFEELAELTGQRNAIDGRIVEIVAEIDRDQLWGATGARSI CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC PALVAWKLGLSSKNAKTIAAIAHRLDEFPRCTQALREGRLSLDQVGAIAERATTGSDDHY HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHH AELATHASVSQLRTAIKLEPPPQPQPEPEPVSDADVEPKPLPDPADLQPSITTTSDEQYT HHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE HWHIKVPHVDAAKVDAALHSRLDGLIAQWKRDHGDHGDTDHKDARGFGRPPMPRLADAFM EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH DLIDTAWDAEAARRPHGDRTTVVMHLDINDRIAALHLGPLLSDADRRYLGCDATCEVWFE HHHHHHCCHHHHHCCCCCCEEEEEEECCCCCEEEEECCCHHCCCCCCEECCCCEEEEEEC RNGQPIGTGRTTRLINRRLRRALEHRNRTCVVPGCESTRGLHAHHIQHWEDGGPTDLDNL CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCE VLVCPYHHRLHHRGIITITGPASKLTVTDATGRQLHSGSLARPPTTPPPTVPLYRGPSGE EEECCCHHHHHCCCEEEEECCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCEEECCCCC RADWWWYTPFQPPPQAAN CCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA