| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800619
Identifier: 108800619
GI number: 108800619
Start: 3910184
End: 3910813
Strand: Reverse
Name: 108800619
Synonym: Mmcs_3653
Alternate gene names: NA
Gene position: 3910813-3910184 (Counterclockwise)
Preceding gene: 108800620
Following gene: 108800618
Centisome position: 68.55
GC content: 63.02
Gene sequence:
>630_bases GTGACCGAGAAAGACGACGCCAGCGTCACCGATACCAGCGTCACCGATGTCGAACCATCCGTCGACGAGATCGACAGGCG CGACGAGTCGCTCGAGGACGTCTCTGAAGGAGAGTCCGAAGGCGCGGTGCAGTCGCGCCGACGCCTCGTGGGCGCAGTCG GGATGGCTGTCCTCGCCATCGCGCTGATCGCCTCCGTAGGGGCGACGGCCTGGTTGTATTTCTTCCAGTTCCGGCCCGAC CAGGAGACCGATTCCGAAGCGGCGAAGGTGGCGATCGATGCGGCGAGTCAAGCGTCGGTATCGCTGCTGACCTACTCTCC CGAGACGCTCGACAAAGACTTCGCTGCGGCGAAAACCCAGTTGACCGGAGATTTCCTCGACTACTACACGGACTTCACCG AGAAGATCGTCACCCCCGCCGCCAAGCAGAAGCAGGTGAAGACCAGCGCGGCGGTCGTCCAGGCCGCCCTGTCGCAACTG AGCCCCGAGTCGGCCGAGGTGCTGCTGTTCATCAACCAGACGACGACCAGCAAGGAGAATCCCGACGGAGCGTATGCGGC GAGCAGCGTGAAAGTCGGTATGACGAAGATCGACGGCGCATGGAAGATCTCCTCGTTCGACCCGGTGTGA
Upstream 100 bases:
>100_bases ATGCCGCCGGTGCCAAACAGGAGCCCCGCGCGTGGCGGCTGGCCGTGGAGCTCAGTCGCGAAGGTGACCAGATCAAGATG TCGAAAGTCGAGTTCGTGCC
Downstream 100 bases:
>100_bases TCCTGCTTCGGTCATTGCCGGCTGCACCCCGGTTTGCTCGCGGCGGCCCAGGGGTATCTCGCCCGATGTAGTCGAGAAAC CCCGAAGTAGTCGAGAGACG
Product: twin-arginine translocation pathway signal
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MTEKDDASVTDTSVTDVEPSVDEIDRRDESLEDVSEGESEGAVQSRRRLVGAVGMAVLAIALIASVGATAWLYFFQFRPD QETDSEAAKVAIDAASQASVSLLTYSPETLDKDFAAAKTQLTGDFLDYYTDFTEKIVTPAAKQKQVKTSAAVVQAALSQL SPESAEVLLFINQTTTSKENPDGAYAASSVKVGMTKIDGAWKISSFDPV
Sequences:
>Translated_209_residues MTEKDDASVTDTSVTDVEPSVDEIDRRDESLEDVSEGESEGAVQSRRRLVGAVGMAVLAIALIASVGATAWLYFFQFRPD QETDSEAAKVAIDAASQASVSLLTYSPETLDKDFAAAKTQLTGDFLDYYTDFTEKIVTPAAKQKQVKTSAAVVQAALSQL SPESAEVLLFINQTTTSKENPDGAYAASSVKVGMTKIDGAWKISSFDPV >Mature_208_residues TEKDDASVTDTSVTDVEPSVDEIDRRDESLEDVSEGESEGAVQSRRRLVGAVGMAVLAIALIASVGATAWLYFFQFRPDQ ETDSEAAKVAIDAASQASVSLLTYSPETLDKDFAAAKTQLTGDFLDYYTDFTEKIVTPAAKQKQVKTSAAVVQAALSQLS PESAEVLLFINQTTTSKENPDGAYAASSVKVGMTKIDGAWKISSFDPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv1363c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22348; Mature: 22217
Theoretical pI: Translated: 4.05; Mature: 4.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKDDASVTDTSVTDVEPSVDEIDRRDESLEDVSEGESEGAVQSRRRLVGAVGMAVLAI CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ALIASVGATAWLYFFQFRPDQETDSEAAKVAIDAASQASVSLLTYSPETLDKDFAAAKTQ HHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHH LTGDFLDYYTDFTEKIVTPAAKQKQVKTSAAVVQAALSQLSPESAEVLLFINQTTTSKEN HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC PDGAYAASSVKVGMTKIDGAWKISSFDPV CCCCEECCCEEECCEEECCCEECCCCCCC >Mature Secondary Structure TEKDDASVTDTSVTDVEPSVDEIDRRDESLEDVSEGESEGAVQSRRRLVGAVGMAVLAI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH ALIASVGATAWLYFFQFRPDQETDSEAAKVAIDAASQASVSLLTYSPETLDKDFAAAKTQ HHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHHHH LTGDFLDYYTDFTEKIVTPAAKQKQVKTSAAVVQAALSQLSPESAEVLLFINQTTTSKEN HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCC PDGAYAASSVKVGMTKIDGAWKISSFDPV CCCCEECCCEEECCEEECCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]