| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800555
Identifier: 108800555
GI number: 108800555
Start: 3825502
End: 3826668
Strand: Reverse
Name: 108800555
Synonym: Mmcs_3589
Alternate gene names: NA
Gene position: 3826668-3825502 (Counterclockwise)
Preceding gene: 108800556
Following gene: 108800554
Centisome position: 67.07
GC content: 69.41
Gene sequence:
>1167_bases GTGCCTGACACCAAGCACCTGCAGGCCGGCGTGCAGGTCGCCGCCGGTCTGGCGTTGAACGTCTTCCCGGCGATCTTCAT CGCCATCTACGCGCGCATCGCGCCGATCGAGACCCAGGGGTTCCTCGCGCTGGCGCTCGCCGTCGGCGTCTACGTCGCGC AGTTGTTCAACGCCTTCATCGTCGAGGGTCGGCTGGCCACTCCCGACGCCGACGGAGAGCTGGGCCTGCCGACGTGGGTG GTGTTGCTCAGCACCGCCGCGTGCGGCTTGCTCGTATTCGGCCCCGCGGTCGCCTCGTCGGCGATCCTGATGGCGAGCGC CATCGGCGTGATGACCGGCCTGCTGATGACCCGCTCGATCGGGGTGGTCACCGGCGAATGGAAGAACGAGGGCGCGGCCG CGGGGGCGTTGATCGTGGCCAGCCTGATCGCGCTGTGGATGGCCGACCAGGGCAGCCCGCACAGCGTGCGGGTGCTGGCG ATCGGCGCGCTGCTCGCGGTGGTGGTCCGGTACCGACCGCGAAAAGCGATGCCCCGCATGGGCTTTCCGCCGGACGTCCG CAGATCCAGCTGGGTCACCGCGGAGACCGCGGTCGTCGGCGCCGTTCAACCGGCGATCACCTCGTTACTTCTGGTCCTGG TCGGACCGGCCGCCTCGGTCACGTTCCGCGTCATCTCGACCGTCGCCGGCGCCCTGGAGCCGATCCTGGCCTACGGGCGT TATCGCCTGCTCGCGCACGGGCACCGGGGTGAGCTCAAGGCGTTCGTCGCGGTGTTCGCCGTCGGGATGGCCGCCGTGCT GATCGCCGCGTTCGGTGGAGTCGGCAGCCTGGTCTTCGGTCCGGCATGGCAGGACGTGGGAGTCGCTGCCATGCTGCTGG CCTGTCTGTGGAAGGCCGCCATGCTGGTGTCCACCGTGCCGTTCGCCGCCCTGCGCAAGGCGGGTAAGACGGTGCTCGTC TTCTGGATCCGGGGTGCCAGCACCGTCGTCTACCTGGTGGTCAGCGTGGGCCTGCTGTTCGTGTGGCAGAACACGGCGGC GATCTTCCTGGCCTTCGTGGTCGCGGAGATGATCACGGCGGTCGTCTACCACTTCGCCGCGGTGATGGGGGCGCCGGATT ACGCCGCGACGTTCGGCACCCGTCGACTACGCCAACGGTTCGGCTGA
Upstream 100 bases:
>100_bases GACCCGGTCGCGATTCGCCAACGCGCCGAACAGTTCTCACCCGAAGCGTTCCGCGCCAGGATGGCCGACGTGGTGGCGCA GACATTGGCGACCCACCGCA
Downstream 100 bases:
>100_bases CGATGCCCAGCGCCACCCGCCCGCCCGCATGGTTCAGCCCCGCGGTGCTGATCCTGGCGCCCGTGGCCCTGTCGTTCCTG GCGTGGTCGGCGCTGTATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MPDTKHLQAGVQVAAGLALNVFPAIFIAIYARIAPIETQGFLALALAVGVYVAQLFNAFIVEGRLATPDADGELGLPTWV VLLSTAACGLLVFGPAVASSAILMASAIGVMTGLLMTRSIGVVTGEWKNEGAAAGALIVASLIALWMADQGSPHSVRVLA IGALLAVVVRYRPRKAMPRMGFPPDVRRSSWVTAETAVVGAVQPAITSLLLVLVGPAASVTFRVISTVAGALEPILAYGR YRLLAHGHRGELKAFVAVFAVGMAAVLIAAFGGVGSLVFGPAWQDVGVAAMLLACLWKAAMLVSTVPFAALRKAGKTVLV FWIRGASTVVYLVVSVGLLFVWQNTAAIFLAFVVAEMITAVVYHFAAVMGAPDYAATFGTRRLRQRFG
Sequences:
>Translated_388_residues MPDTKHLQAGVQVAAGLALNVFPAIFIAIYARIAPIETQGFLALALAVGVYVAQLFNAFIVEGRLATPDADGELGLPTWV VLLSTAACGLLVFGPAVASSAILMASAIGVMTGLLMTRSIGVVTGEWKNEGAAAGALIVASLIALWMADQGSPHSVRVLA IGALLAVVVRYRPRKAMPRMGFPPDVRRSSWVTAETAVVGAVQPAITSLLLVLVGPAASVTFRVISTVAGALEPILAYGR YRLLAHGHRGELKAFVAVFAVGMAAVLIAAFGGVGSLVFGPAWQDVGVAAMLLACLWKAAMLVSTVPFAALRKAGKTVLV FWIRGASTVVYLVVSVGLLFVWQNTAAIFLAFVVAEMITAVVYHFAAVMGAPDYAATFGTRRLRQRFG >Mature_387_residues PDTKHLQAGVQVAAGLALNVFPAIFIAIYARIAPIETQGFLALALAVGVYVAQLFNAFIVEGRLATPDADGELGLPTWVV LLSTAACGLLVFGPAVASSAILMASAIGVMTGLLMTRSIGVVTGEWKNEGAAAGALIVASLIALWMADQGSPHSVRVLAI GALLAVVVRYRPRKAMPRMGFPPDVRRSSWVTAETAVVGAVQPAITSLLLVLVGPAASVTFRVISTVAGALEPILAYGRY RLLAHGHRGELKAFVAVFAVGMAAVLIAAFGGVGSLVFGPAWQDVGVAAMLLACLWKAAMLVSTVPFAALRKAGKTVLVF WIRGASTVVYLVVSVGLLFVWQNTAAIFLAFVVAEMITAVVYHFAAVMGAPDYAATFGTRRLRQRFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40501; Mature: 40369
Theoretical pI: Translated: 10.47; Mature: 10.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDTKHLQAGVQVAAGLALNVFPAIFIAIYARIAPIETQGFLALALAVGVYVAQLFNAFI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VEGRLATPDADGELGLPTWVVLLSTAACGLLVFGPAVASSAILMASAIGVMTGLLMTRSI HCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC GVVTGEWKNEGAAAGALIVASLIALWMADQGSPHSVRVLAIGALLAVVVRYRPRKAMPRM CCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCC GFPPDVRRSSWVTAETAVVGAVQPAITSLLLVLVGPAASVTFRVISTVAGALEPILAYGR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YRLLAHGHRGELKAFVAVFAVGMAAVLIAAFGGVGSLVFGPAWQDVGVAAMLLACLWKAA HHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHH MLVSTVPFAALRKAGKTVLVFWIRGASTVVYLVVSVGLLFVWQNTAAIFLAFVVAEMITA HHHHHCCHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVYHFAAVMGAPDYAATFGTRRLRQRFG HHHHHHHHHCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure PDTKHLQAGVQVAAGLALNVFPAIFIAIYARIAPIETQGFLALALAVGVYVAQLFNAFI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH VEGRLATPDADGELGLPTWVVLLSTAACGLLVFGPAVASSAILMASAIGVMTGLLMTRSI HCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHC GVVTGEWKNEGAAAGALIVASLIALWMADQGSPHSVRVLAIGALLAVVVRYRPRKAMPRM CCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCCC GFPPDVRRSSWVTAETAVVGAVQPAITSLLLVLVGPAASVTFRVISTVAGALEPILAYGR CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YRLLAHGHRGELKAFVAVFAVGMAAVLIAAFGGVGSLVFGPAWQDVGVAAMLLACLWKAA HHEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHH MLVSTVPFAALRKAGKTVLVFWIRGASTVVYLVVSVGLLFVWQNTAAIFLAFVVAEMITA HHHHHCCHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVYHFAAVMGAPDYAATFGTRRLRQRFG HHHHHHHHHCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA