| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800489
Identifier: 108800489
GI number: 108800489
Start: 3750530
End: 3751177
Strand: Reverse
Name: 108800489
Synonym: Mmcs_3523
Alternate gene names: NA
Gene position: 3751177-3750530 (Counterclockwise)
Preceding gene: 108800490
Following gene: 108800487
Centisome position: 65.75
GC content: 69.75
Gene sequence:
>648_bases GTGACCGCGCAAGCGCCGCTGACCGAGTTGACGCGCGCCGAACGCGCCGATCTCGCGGGGTTCCTCGCCACGCTGACCCC CGAGGAGTGGTACGCACCGAGTCTGTGCGCCGGGTGGACCGTCAAAGACGTTGTCGCTCATGTCATCAGCTACGAGGATC TCGGCGTCGCCGGCTTCCTCGGGCGTTTGGTGAAGGGCCGAATCACCGACGCCAATCAGGTCGGGGTGAACGAATTCTCC CATCTGTCCCCGTCGGAACTGCTCGACCACCTCAACCGGCACCTCGACCCGTCGGGGCTCACCGCGCAGTTCGGCGGGAT GATCGGCTTCGTCGACGGCACGATCCACCACCAGGACATCCGCCGCGCGCTGGACCGGCCGCGCACCATCCCGGCCGACC GGCTGTCGCGGATCCTGCCGCTGGTGCCCGGCAATCCGCGGTTGGGTGCCGGCCGGCGGATCCGGGGGCTGCGACTGCGC GCCACCGATGTCGACTGGACCCACGGCGACGGCCCGGAGGTGGTCGGACCAGGGGAGGCCCTGCTGATGGCGATGACCGG ACGTCCGGCTGCACTCGCGGACCTGGACGGCCCCGCCAAAGCTCTTCTCGCGCAACGGCTTCGCCCTCGCCGAGACCACG GTAGTTGA
Upstream 100 bases:
>100_bases ACCTCGACCGGCACGGTGACGGCTGGGAATCCGTGGCGACGGGTGTCGACGGCGACGCCGGCTGGCCGCTGTACCTGACG CGGTACCGGGGCCTGCTGAC
Downstream 100 bases:
>100_bases CGGGTTCACCCGCGTTTCGCGTCACCCACCGTGGTGTCGGCGCGCGTGGTGGTCAGCCGATGCGGCCGGTGACCGGCGGC AGGTCCTTGAGCGTCACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 214
Protein sequence:
>215_residues MTAQAPLTELTRAERADLAGFLATLTPEEWYAPSLCAGWTVKDVVAHVISYEDLGVAGFLGRLVKGRITDANQVGVNEFS HLSPSELLDHLNRHLDPSGLTAQFGGMIGFVDGTIHHQDIRRALDRPRTIPADRLSRILPLVPGNPRLGAGRRIRGLRLR ATDVDWTHGDGPEVVGPGEALLMAMTGRPAALADLDGPAKALLAQRLRPRRDHGS
Sequences:
>Translated_215_residues MTAQAPLTELTRAERADLAGFLATLTPEEWYAPSLCAGWTVKDVVAHVISYEDLGVAGFLGRLVKGRITDANQVGVNEFS HLSPSELLDHLNRHLDPSGLTAQFGGMIGFVDGTIHHQDIRRALDRPRTIPADRLSRILPLVPGNPRLGAGRRIRGLRLR ATDVDWTHGDGPEVVGPGEALLMAMTGRPAALADLDGPAKALLAQRLRPRRDHGS >Mature_214_residues TAQAPLTELTRAERADLAGFLATLTPEEWYAPSLCAGWTVKDVVAHVISYEDLGVAGFLGRLVKGRITDANQVGVNEFSH LSPSELLDHLNRHLDPSGLTAQFGGMIGFVDGTIHHQDIRRALDRPRTIPADRLSRILPLVPGNPRLGAGRRIRGLRLRA TDVDWTHGDGPEVVGPGEALLMAMTGRPAALADLDGPAKALLAQRLRPRRDHGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23247; Mature: 23116
Theoretical pI: Translated: 7.85; Mature: 7.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAQAPLTELTRAERADLAGFLATLTPEEWYAPSLCAGWTVKDVVAHVISYEDLGVAGFL CCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHCCCCHHHHHHHHHHHCCCCHHHHH GRLVKGRITDANQVGVNEFSHLSPSELLDHLNRHLDPSGLTAQFGGMIGFVDGTIHHQDI HHHHHCCCCCCHHCCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCEEEECCCCCCHHHH RRALDRPRTIPADRLSRILPLVPGNPRLGAGRRIRGLRLRATDVDWTHGDGPEVVGPGEA HHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCE LLMAMTGRPAALADLDGPAKALLAQRLRPRRDHGS EEEEECCCCCEECCCCCHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TAQAPLTELTRAERADLAGFLATLTPEEWYAPSLCAGWTVKDVVAHVISYEDLGVAGFL CCCCCHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHCCCCHHHHHHHHHHHCCCCHHHHH GRLVKGRITDANQVGVNEFSHLSPSELLDHLNRHLDPSGLTAQFGGMIGFVDGTIHHQDI HHHHHCCCCCCHHCCCHHHCCCCHHHHHHHHHHCCCCCCCHHHHCCEEEECCCCCCHHHH RRALDRPRTIPADRLSRILPLVPGNPRLGAGRRIRGLRLRATDVDWTHGDGPEVVGPGEA HHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCEECCCCE LLMAMTGRPAALADLDGPAKALLAQRLRPRRDHGS EEEEECCCCCEECCCCCHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA