| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is cysW [H]
Identifier: 108800446
GI number: 108800446
Start: 3708116
End: 3708937
Strand: Reverse
Name: cysW [H]
Synonym: Mmcs_3480
Alternate gene names: 108800446
Gene position: 3708937-3708116 (Counterclockwise)
Preceding gene: 108800447
Following gene: 108800445
Centisome position: 65.01
GC content: 66.91
Gene sequence:
>822_bases ATGCTGTTGTCGCCGGTGACGCGCCGGGTACTGCGCTTCGTCGCGCTGGCCTACATCCTGGTGCTGGTCGTCGTGCCGGT GGGGCTGATCCTGTGGCGGACCTTCTCACCCGGCATCGGCGCGTTCGTCGCATCGATCGGGACCCCCGCGGCCATCAGCG CGCTGCAGTTGTCGCTGCTCGTCGTGGCGATCGTCGTCCCGCTCAACGTGCTGTTCGGGGTTCCGACCGCGCTGGTGTTG GCGCGCAACAAGTTCCGCGGTAAGAGCGCGCTCCAGGCGGTGATCGACCTGCCGTTCGCGGTGTCGCCGGTGGTCGTGGG TGTCGCGCTGATCCTGCTGTGGGGGTCGGCCGGGGTGTTCGGATTCGTCGAGAACAACCTCGGCTTCAAGATCATCTTCG GGCTGCCCGGCATCGTGCTCGCGAGCATCTTCGTCACCGTGCCGTTCGTCATCCGCGAGGTCGAACCGGTGCTGCACGAG ATCGGCACCGACCAGGAGGAAGCCGCCTCGACCCTGGGCTCGCAGTGGTGGCAGACCTTCTGGCGGATCACGCTGCCGTC GATCCGCTGGGGTCTCACGTATGGCGTGGTCCTCACCATCGCCCGCACACTGGGGGAGTACGGCGCGGTCATCATGGTGT CGTCGAACCTGCCGGGCACCTCGCAGACCCTGACGCTGCTGGTGTCCGACCGTTACAACCGGGGTGCCGAATACGGTGCC TACGCCGTGTCGACACTGCTCATGGGGGTCGCGGTGATCGTCCTGGTGGTCCAGGTGGTACTCGACGCCCGTCGGGGCCG ACAGGAGAGCAGAGGGTCATGA
Upstream 100 bases:
>100_bases TCGATCGTGCTGCTGGCGATCTCGTTCGTCGTGCTGTTGATCCTGCGCGCGCTCGGCGCGCGGGCGGCCAAACGGGAACA GATGGCGGGGTGATCGAGCA
Downstream 100 bases:
>100_bases CAGACGCGATCATCGTGCGCGGCGCCAACAAGCACTACGGCGACTTCGCGGCGCTGGACAACATCGACTTCGAGGTTCCG GCCGGTTCGCTCACCGCACT
Product: Sulfate ABC transporter permease CysW
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MLLSPVTRRVLRFVALAYILVLVVVPVGLILWRTFSPGIGAFVASIGTPAAISALQLSLLVVAIVVPLNVLFGVPTALVL ARNKFRGKSALQAVIDLPFAVSPVVVGVALILLWGSAGVFGFVENNLGFKIIFGLPGIVLASIFVTVPFVIREVEPVLHE IGTDQEEAASTLGSQWWQTFWRITLPSIRWGLTYGVVLTIARTLGEYGAVIMVSSNLPGTSQTLTLLVSDRYNRGAEYGA YAVSTLLMGVAVIVLVVQVVLDARRGRQESRGS
Sequences:
>Translated_273_residues MLLSPVTRRVLRFVALAYILVLVVVPVGLILWRTFSPGIGAFVASIGTPAAISALQLSLLVVAIVVPLNVLFGVPTALVL ARNKFRGKSALQAVIDLPFAVSPVVVGVALILLWGSAGVFGFVENNLGFKIIFGLPGIVLASIFVTVPFVIREVEPVLHE IGTDQEEAASTLGSQWWQTFWRITLPSIRWGLTYGVVLTIARTLGEYGAVIMVSSNLPGTSQTLTLLVSDRYNRGAEYGA YAVSTLLMGVAVIVLVVQVVLDARRGRQESRGS >Mature_273_residues MLLSPVTRRVLRFVALAYILVLVVVPVGLILWRTFSPGIGAFVASIGTPAAISALQLSLLVVAIVVPLNVLFGVPTALVL ARNKFRGKSALQAVIDLPFAVSPVVVGVALILLWGSAGVFGFVENNLGFKIIFGLPGIVLASIFVTVPFVIREVEPVLHE IGTDQEEAASTLGSQWWQTFWRITLPSIRWGLTYGVVLTIARTLGEYGAVIMVSSNLPGTSQTLTLLVSDRYNRGAEYGA YAVSTLLMGVAVIVLVVQVVLDARRGRQESRGS
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=255, Percent_Identity=40, Blast_Score=181, Evalue=6e-47, Organism=Escherichia coli, GI1788764, Length=223, Percent_Identity=33.6322869955157, Blast_Score=133, Evalue=1e-32, Organism=Escherichia coli, GI1786980, Length=220, Percent_Identity=34.5454545454545, Blast_Score=89, Evalue=4e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29225; Mature: 29225
Theoretical pI: Translated: 10.41; Mature: 10.41
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSPVTRRVLRFVALAYILVLVVVPVGLILWRTFSPGIGAFVASIGTPAAISALQLSLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHH VVAIVVPLNVLFGVPTALVLARNKFRGKSALQAVIDLPFAVSPVVVGVALILLWGSAGVF HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEE GFVENNLGFKIIFGLPGIVLASIFVTVPFVIREVEPVLHEIGTDQEEAASTLGSQWWQTF EEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH WRITLPSIRWGLTYGVVLTIARTLGEYGAVIMVSSNLPGTSQTLTLLVSDRYNRGAEYGA HHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHEEEEECCCCCCCHHHH YAVSTLLMGVAVIVLVVQVVLDARRGRQESRGS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MLLSPVTRRVLRFVALAYILVLVVVPVGLILWRTFSPGIGAFVASIGTPAAISALQLSLL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHH VVAIVVPLNVLFGVPTALVLARNKFRGKSALQAVIDLPFAVSPVVVGVALILLWGSAGVF HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEE GFVENNLGFKIIFGLPGIVLASIFVTVPFVIREVEPVLHEIGTDQEEAASTLGSQWWQTF EEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH WRITLPSIRWGLTYGVVLTIARTLGEYGAVIMVSSNLPGTSQTLTLLVSDRYNRGAEYGA HHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHEEEEECCCCCCCHHHH YAVSTLLMGVAVIVLVVQVVLDARRGRQESRGS HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]