| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is fabH [H]
Identifier: 108800380
GI number: 108800380
Start: 3623920
End: 3625032
Strand: Reverse
Name: fabH [H]
Synonym: Mmcs_3414
Alternate gene names: 108800380
Gene position: 3625032-3623920 (Counterclockwise)
Preceding gene: 108800381
Following gene: 108800379
Centisome position: 63.54
GC content: 68.19
Gene sequence:
>1113_bases GTGACGCTGGTGAGCACTCATTGGCTGGTGATGGACCACTCGAGGGACGGTGACGGCGCGCCGTACCGCACCCGGTTGGC CGCGGCCGGCCGGCATCTGCCCGCGACCCGTCTGACGACCGACGAGTTGATGTCGTCGACGCGGCACAACACCCACATCG ACCTCGAACGCCTCACCGGGATCCACGAGCGCCGGGTGTCGGTCGGGGACGAGGACTCCTACAGCCTGGCCACCACGGCG GCGCGCGACTGCCTGGACAGGGCTGAGACGCCGGCCTCCGAGATCGACGTCGTCATCAGCTGCAGCATCACGAAGTTCCA CGGCGGTCTGACCCAGTGGATGGAACCGACGATGAGCAGCGCGGTCGCGCATGCCATCGGTGCACAGCGGGCGATGACGT TCGACCTGTCCAATGCGTGCGCCGGGATGCTCACGGGCGTCACGGTTCTGAACAACTGGATACGCCAGGGCGTGGTGCGG CGGGGCCTGGTGGTCAGCGGCGAATACATCTCCCAGCTGGGCCACAATGCCGCCCGCCACATCCGCACCATCATGAGCAA GGAACTGGCCTGTCTGACCCTGGGCGACGCCGGCGCTGCATTGCTGCTCGAACGCGCCGGCGCCGACTCGGGCGCGATCA GCCTGGCCGGCTTCACCACGATCGCCGACCACAGCCGGCTGTGCCTGGCCTACCCGAAGGGCCGCGATCCGGGGGCGCGG ATGTTCACCGACTCCCGGGCGATCCAGCGGGCGGCGATCGCCGACACGCCGGTGCTGCTGCACGAGGTCCTGGACGCGGC CGGGATCGCGATCCACGACATCGACCACGTGATCACGCATCAGACCTCGGCGCGGGCCATCCGCAAGGGGATGGCCGAGA TGTCCGCGGTCTTCGGCGACAGCCCCCGCCACGACGCGGTGATCACCGTCGACCGCTACGGGAACACGGCGTCGACGACA CATACGGTGGCCCTCGTCGAAGAGTTGGAGGCAGGCCACATCGAGCCCGGCGAGACGATCGCGCTCATCGCGCTGGCGTC GGGGCTCGAGATCGGGGTCGTACTCATCGAGGTGGACGAGGATCTGGTGAATCGCTATGGGCACCATCATTGA
Upstream 100 bases:
>100_bases GCCGTGCTGGCCGAGATCGAGCACATGCCGTCAGGCCGCCAACAAGGGTCCAAATGCCCTGGCCGCGGGTCGCCGCGGTG AACCACGATCACATCGGGAG
Downstream 100 bases:
>100_bases TCGGGTCGAGCTGACGCGCGGCGGCTGGCGCACCCGGCACAGTGCCCTGCACCTCGCGGTCGCGGCCGCCAGATCGTGTC TCGACGCCGCGCAGCGGGAT
Product: 3-oxoacyl-(acyl-carrier protein) synthase
Products: NA
Alternate protein names: 3-oxoacyl-[acyl-carrier-protein] synthase III; Beta-ketoacyl-ACP synthase III; KAS III [H]
Number of amino acids: Translated: 370; Mature: 369
Protein sequence:
>370_residues MTLVSTHWLVMDHSRDGDGAPYRTRLAAAGRHLPATRLTTDELMSSTRHNTHIDLERLTGIHERRVSVGDEDSYSLATTA ARDCLDRAETPASEIDVVISCSITKFHGGLTQWMEPTMSSAVAHAIGAQRAMTFDLSNACAGMLTGVTVLNNWIRQGVVR RGLVVSGEYISQLGHNAARHIRTIMSKELACLTLGDAGAALLLERAGADSGAISLAGFTTIADHSRLCLAYPKGRDPGAR MFTDSRAIQRAAIADTPVLLHEVLDAAGIAIHDIDHVITHQTSARAIRKGMAEMSAVFGDSPRHDAVITVDRYGNTASTT HTVALVEELEAGHIEPGETIALIALASGLEIGVVLIEVDEDLVNRYGHHH
Sequences:
>Translated_370_residues MTLVSTHWLVMDHSRDGDGAPYRTRLAAAGRHLPATRLTTDELMSSTRHNTHIDLERLTGIHERRVSVGDEDSYSLATTA ARDCLDRAETPASEIDVVISCSITKFHGGLTQWMEPTMSSAVAHAIGAQRAMTFDLSNACAGMLTGVTVLNNWIRQGVVR RGLVVSGEYISQLGHNAARHIRTIMSKELACLTLGDAGAALLLERAGADSGAISLAGFTTIADHSRLCLAYPKGRDPGAR MFTDSRAIQRAAIADTPVLLHEVLDAAGIAIHDIDHVITHQTSARAIRKGMAEMSAVFGDSPRHDAVITVDRYGNTASTT HTVALVEELEAGHIEPGETIALIALASGLEIGVVLIEVDEDLVNRYGHHH >Mature_369_residues TLVSTHWLVMDHSRDGDGAPYRTRLAAAGRHLPATRLTTDELMSSTRHNTHIDLERLTGIHERRVSVGDEDSYSLATTAA RDCLDRAETPASEIDVVISCSITKFHGGLTQWMEPTMSSAVAHAIGAQRAMTFDLSNACAGMLTGVTVLNNWIRQGVVRR GLVVSGEYISQLGHNAARHIRTIMSKELACLTLGDAGAALLLERAGADSGAISLAGFTTIADHSRLCLAYPKGRDPGARM FTDSRAIQRAAIADTPVLLHEVLDAAGIAIHDIDHVITHQTSARAIRKGMAEMSAVFGDSPRHDAVITVDRYGNTASTTH TVALVEELEAGHIEPGETIALIALASGLEIGVVLIEVDEDLVNRYGHHH
Specific function: Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the
COG id: COG0332
COG function: function code I; 3-oxoacyl-[acyl-carrier-protein] synthase III
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the fabH family [H]
Homologues:
Organism=Escherichia coli, GI1787333, Length=336, Percent_Identity=22.6190476190476, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013751 - InterPro: IPR013747 - InterPro: IPR004655 - InterPro: IPR016039 - InterPro: IPR016038 [H]
Pfam domain/function: PF08545 ACP_syn_III; PF08541 ACP_syn_III_C [H]
EC number: =2.3.1.180 [H]
Molecular weight: Translated: 39721; Mature: 39590
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLVSTHWLVMDHSRDGDGAPYRTRLAAAGRHLPATRLTTDELMSSTRHNTHIDLERLTG CCEEEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEHHHHCC IHERRVSVGDEDSYSLATTAARDCLDRAETPASEIDVVISCSITKFHGGLTQWMEPTMSS HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEEEEEHHHCCCHHHHHHHHHHH AVAHAIGAQRAMTFDLSNACAGMLTGVTVLNNWIRQGVVRRGLVVSGEYISQLGHNAARH HHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHH IRTIMSKELACLTLGDAGAALLLERAGADSGAISLAGFTTIADHSRLCLAYPKGRDPGAR HHHHHHCCEEEEEECCCCHHHHHHHCCCCCCCEEEECCCEECCCCCEEEECCCCCCCCCC MFTDSRAIQRAAIADTPVLLHEVLDAAGIAIHDIDHVITHQTSARAIRKGMAEMSAVFGD HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC SPRHDAVITVDRYGNTASTTHTVALVEELEAGHIEPGETIALIALASGLEIGVVLIEVDE CCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEEEECH DLVNRYGHHH HHHHHCCCCC >Mature Secondary Structure TLVSTHWLVMDHSRDGDGAPYRTRLAAAGRHLPATRLTTDELMSSTRHNTHIDLERLTG CEEEEEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCEEEHHHHCC IHERRVSVGDEDSYSLATTAARDCLDRAETPASEIDVVISCSITKFHGGLTQWMEPTMSS HHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHEEEEEEEEEHHHCCCHHHHHHHHHHH AVAHAIGAQRAMTFDLSNACAGMLTGVTVLNNWIRQGVVRRGLVVSGEYISQLGHNAARH HHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHH IRTIMSKELACLTLGDAGAALLLERAGADSGAISLAGFTTIADHSRLCLAYPKGRDPGAR HHHHHHCCEEEEEECCCCHHHHHHHCCCCCCCEEEECCCEECCCCCEEEECCCCCCCCCC MFTDSRAIQRAAIADTPVLLHEVLDAAGIAIHDIDHVITHQTSARAIRKGMAEMSAVFGD HHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC SPRHDAVITVDRYGNTASTTHTVALVEELEAGHIEPGETIALIALASGLEIGVVLIEVDE CCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEECCCEEEEEEEEECH DLVNRYGHHH HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA