| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is ampH [C]
Identifier: 108800343
GI number: 108800343
Start: 3579254
End: 3580078
Strand: Reverse
Name: ampH [C]
Synonym: Mmcs_3377
Alternate gene names: 108800343
Gene position: 3580078-3579254 (Counterclockwise)
Preceding gene: 108800344
Following gene: 108800342
Centisome position: 62.75
GC content: 69.7
Gene sequence:
>825_bases ATGGGCGTGCTCGACGTGATCGCGGACTGGCCGGTCGGTACCGCTGCCGCGGCGGTGGTCGGACCGGCCGGTGTGCTGGC CGAGTACGGCGATCAGCGGCACCGGTTCCGGCTCGCGTCGGTCACCAAACCGCTGGCGGCGCGTGCCGCGCAGATCGCCG TCGAGGAAGGTGTCGTCGACCTCGACACCGAGGCGGGTCCGCCCGGCTCGACCGTCCGGCACCTGCTCGCCCACACCTCC GGGCTTTCCATGCACTCCGACGAGACGATGGCCGAACCGGGCGACCGCCGCGTCTACTCGAACTACGGATTCGGGGTGCT CGCCGCCACCATCGAGCGGGCCGCCGACATCGAGTTCGGCCGCTATCTCGCCGAGGCGGTGTTCGAACCGCTCGGCATGT CCGACAGCACGCTCGACGGCGGGGCGGAGGCCGCCGGGTACGGGGCCTACTCCACGGTCGCCGACGTCGCGGCGTTCGCC GGCGACCTGCTGCGCCCGAAGCTGGTCTCCCAGCAGATGCACGACGAGGCGACCAGCGTGCAGTTCCCGGGACTCGACGG CGTGTTGCCCGGCTTCGGCGTGCAGCGCCCCAACGACTGGGGCCTGGGGTTCGAGATCCGCGACGACAAGTCGCCACACT GGACCGGCTCGACGAACTCGAAGCGCACGTACGGCCATTTCGGCCAGTCAGGGACGTTTCTGTGGGTGGATCCGGACGCG GACCTGGCGCTCGTCACCTTTGCTGATCGCGACTTCGGGGACTGGGCGTACGAGCGTTGGCCGACGATCTCTGATGGAGT CCTGAGAGAATTCGGGCCACACTAG
Upstream 100 bases:
>100_bases TCGATGCTGGCCGACGCCGGCTTCACCGAAGTGGACGTGCGGGAGATCGACTCCGATCCGCTGAACTTCTACTACGTCTG CCGCAAGTAACATCTGCCCG
Downstream 100 bases:
>100_bases CGCAACAGGCGCCTCACAAGGCACAATAGACACGCACGACACAGTTGTAATTCGGTTTCAAGAGGCCGCTTGGGGAAGAC GTCCCTCGTGGAGCCGAAGG
Product: beta-lactamase
Products: NA
Alternate protein names: Beta-Lactamase Class C; Esterase; Beta Lactamase
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MGVLDVIADWPVGTAAAAVVGPAGVLAEYGDQRHRFRLASVTKPLAARAAQIAVEEGVVDLDTEAGPPGSTVRHLLAHTS GLSMHSDETMAEPGDRRVYSNYGFGVLAATIERAADIEFGRYLAEAVFEPLGMSDSTLDGGAEAAGYGAYSTVADVAAFA GDLLRPKLVSQQMHDEATSVQFPGLDGVLPGFGVQRPNDWGLGFEIRDDKSPHWTGSTNSKRTYGHFGQSGTFLWVDPDA DLALVTFADRDFGDWAYERWPTISDGVLREFGPH
Sequences:
>Translated_274_residues MGVLDVIADWPVGTAAAAVVGPAGVLAEYGDQRHRFRLASVTKPLAARAAQIAVEEGVVDLDTEAGPPGSTVRHLLAHTS GLSMHSDETMAEPGDRRVYSNYGFGVLAATIERAADIEFGRYLAEAVFEPLGMSDSTLDGGAEAAGYGAYSTVADVAAFA GDLLRPKLVSQQMHDEATSVQFPGLDGVLPGFGVQRPNDWGLGFEIRDDKSPHWTGSTNSKRTYGHFGQSGTFLWVDPDA DLALVTFADRDFGDWAYERWPTISDGVLREFGPH >Mature_273_residues GVLDVIADWPVGTAAAAVVGPAGVLAEYGDQRHRFRLASVTKPLAARAAQIAVEEGVVDLDTEAGPPGSTVRHLLAHTSG LSMHSDETMAEPGDRRVYSNYGFGVLAATIERAADIEFGRYLAEAVFEPLGMSDSTLDGGAEAAGYGAYSTVADVAAFAG DLLRPKLVSQQMHDEATSVQFPGLDGVLPGFGVQRPNDWGLGFEIRDDKSPHWTGSTNSKRTYGHFGQSGTFLWVDPDAD LALVTFADRDFGDWAYERWPTISDGVLREFGPH
Specific function: Binds Penicillin And Contributes To The Normal Morphology Of Escherichia Coli. [C]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29287; Mature: 29155
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVLDVIADWPVGTAAAAVVGPAGVLAEYGDQRHRFRLASVTKPLAARAAQIAVEEGVVD CCHHHHHHCCCCCHHHHHHHCHHHHHHHHCCHHHHEEHHHHHHHHHHHHHHHHHHCCCEE LDTEAGPPGSTVRHLLAHTSGLSMHSDETMAEPGDRRVYSNYGFGVLAATIERAADIEFG ECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCHHHH RYLAEAVFEPLGMSDSTLDGGAEAAGYGAYSTVADVAAFAGDLLRPKLVSQQMHDEATSV HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE QFPGLDGVLPGFGVQRPNDWGLGFEIRDDKSPHWTGSTNSKRTYGHFGQSGTFLWVDPDA ECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC DLALVTFADRDFGDWAYERWPTISDGVLREFGPH CEEEEEECCCCCCCHHHHHCCCCCHHHHHHCCCC >Mature Secondary Structure GVLDVIADWPVGTAAAAVVGPAGVLAEYGDQRHRFRLASVTKPLAARAAQIAVEEGVVD CHHHHHHCCCCCHHHHHHHCHHHHHHHHCCHHHHEEHHHHHHHHHHHHHHHHHHCCCEE LDTEAGPPGSTVRHLLAHTSGLSMHSDETMAEPGDRRVYSNYGFGVLAATIERAADIEFG ECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCHHHH RYLAEAVFEPLGMSDSTLDGGAEAAGYGAYSTVADVAAFAGDLLRPKLVSQQMHDEATSV HHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE QFPGLDGVLPGFGVQRPNDWGLGFEIRDDKSPHWTGSTNSKRTYGHFGQSGTFLWVDPDA ECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC DLALVTFADRDFGDWAYERWPTISDGVLREFGPH CEEEEEECCCCCCCHHHHHCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA