Click here to switch to the map view.

The map label for this gene is 108800202

Identifier: 108800202

GI number: 108800202

Start: 3431170

End: 3431676

Strand: Reverse

Name: 108800202

Synonym: Mmcs_3236

Alternate gene names: NA

Gene position: 3431676-3431170 (Counterclockwise)

Preceding gene: 108800203

Following gene: 108800201

Centisome position: 60.15

GC content: 70.81

Gene sequence:

>507_bases
ATGACCACCACCGACAAACCGGCCCGCGTCGACCGGGCGCAGTACCTGATCTGCGCCGTGCTGGTCGCCGTCGGCGCGTT
CCTGATCGTCGACGCGCTGCGCCTGACCGCCGGATTCGCCAAGGTCGACCCGGTGGGTCCCAGGGCCTTCCCGATCGTCG
TCGGGGCGGTGCTGATCGTGCTGGCGGTGATCCTGGCGATCGCGATCCCGCGCGGGTCGGTGGGGGAGGCCGACGCCGGC
GAGGACGTCGACCCGGAGGCGCCGAGCGACTGGCGCACCGTCGGCCTGCTCGTCGGGCTGTTCGTCGCCGTCATCCTGCT
CGTGCAGCCACTCGGCTGGGTGATCACCGGCACCCTCCTGTTCGCCGGGGCGGTGGCCGTGCTGGGCAACCGCCACTGGG
TGCGCAACATCGCGATCGGGCTGGCGCTGTCGCTGGCGAGTTTCTACGCGTTCTACTCCGGGCTCGGAATCCCGCTGCCC
GTAGGCATTCTCGACGGGATCCTGTAG

Upstream 100 bases:

>100_bases
ACGGCTGGACCGACGCCTTCGTCACCGGTGCGGCGTTCGAGCAGTTCCTCGTCGAACAGGACAACCGGGTCTCGTCGACC
CTGACCGAATTGGGGCTGGT

Downstream 100 bases:

>100_bases
ATGAACAATTTCGACTGGCTGATGCAGGGCTTCGCGGAGGCCGCGACACCGATGAACCTGCTCTACGCGATCATCGGCGT
GCTGCTGGGCACCGCGGTCG

Product: integral membrane protein

Products: NA

Alternate protein names: Citrate Transport Protein TctB

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTTTDKPARVDRAQYLICAVLVAVGAFLIVDALRLTAGFAKVDPVGPRAFPIVVGAVLIVLAVILAIAIPRGSVGEADAG
EDVDPEAPSDWRTVGLLVGLFVAVILLVQPLGWVITGTLLFAGAVAVLGNRHWVRNIAIGLALSLASFYAFYSGLGIPLP
VGILDGIL

Sequences:

>Translated_168_residues
MTTTDKPARVDRAQYLICAVLVAVGAFLIVDALRLTAGFAKVDPVGPRAFPIVVGAVLIVLAVILAIAIPRGSVGEADAG
EDVDPEAPSDWRTVGLLVGLFVAVILLVQPLGWVITGTLLFAGAVAVLGNRHWVRNIAIGLALSLASFYAFYSGLGIPLP
VGILDGIL
>Mature_167_residues
TTTDKPARVDRAQYLICAVLVAVGAFLIVDALRLTAGFAKVDPVGPRAFPIVVGAVLIVLAVILAIAIPRGSVGEADAGE
DVDPEAPSDWRTVGLLVGLFVAVILLVQPLGWVITGTLLFAGAVAVLGNRHWVRNIAIGLALSLASFYAFYSGLGIPLPV
GILDGIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17408; Mature: 17277

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTDKPARVDRAQYLICAVLVAVGAFLIVDALRLTAGFAKVDPVGPRAFPIVVGAVLIV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHH
LAVILAIAIPRGSVGEADAGEDVDPEAPSDWRTVGLLVGLFVAVILLVQPLGWVITGTLL
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGAVAVLGNRHWVRNIAIGLALSLASFYAFYSGLGIPLPVGILDGIL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
>Mature Secondary Structure 
TTTDKPARVDRAQYLICAVLVAVGAFLIVDALRLTAGFAKVDPVGPRAFPIVVGAVLIV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHHH
LAVILAIAIPRGSVGEADAGEDVDPEAPSDWRTVGLLVGLFVAVILLVQPLGWVITGTLL
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGAVAVLGNRHWVRNIAIGLALSLASFYAFYSGLGIPLPVGILDGIL
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA