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The map label for this gene is 108800131

Identifier: 108800131

GI number: 108800131

Start: 3355923

End: 3357569

Strand: Reverse

Name: 108800131

Synonym: Mmcs_3165

Alternate gene names: NA

Gene position: 3357569-3355923 (Counterclockwise)

Preceding gene: 108800132

Following gene: 108800130

Centisome position: 58.85

GC content: 64.18

Gene sequence:

>1647_bases
ATGAGCCTCAGGTTCGCCTTCTATGGCCGAGTGAGTACCGAGGACGCCCAAGATCCGGAGGCGAGCCGCAGCTGGCAGAA
ACGTCGTGCCATCGATCTGATCAGTCCGCATGGCGGCGTCCTCGCCGCCGACTACTTCGATATAGGCCAGAGCCGGTCGC
TTCCCTGGAAACGCAGGCCGGAGGCTTCACGTCTGCTCGCAGATGTCACTTCTCGTGGCCGTGGCTTCGATGCCGTCGTG
ATCGGGGAACCTGCTCGCGCGTTCTACGGACCGCAATTTGCGCTCACCTTCCCGGTGCTCACGCACTACGGGGTCGGCCT
ATGGGTGCCTGAAGTTGGCGGAGCGGTTGATCCCGGATCCGAGGCACACGACCTCGTGATGACGCTCTTTGGCGGAATGA
GCAAGGGAGAACGTGCGCGAATCCAGATGCGCGTGCGTACCGCGATGTCGGCACTCGCGCAGGACACAACCAGATACCTC
GGCGGTCGCCCACCGTACGGTTATCAACTCGTCGATGCCGGCCCGCACCCAAACCCCGCCAAGGCAAGTCTTGGGCAGCG
TCTTCACCGCCTGGAGCCTGACCCCGAGACCGCCCCGACCGTCGAGCGGATCTATCGCATGTATGCCGATGGTGCTGGCT
TGCGCTTCATCGCACAGCAGCTCACCGACGATGGAGTGCCATCACCGAGCCAATACGACCCGGCACGGAACCGGCATCGT
GACCCACGTGGATGGTCCCATTCGGCGATCCGCGCCATTCTCGACAACCCTGCGTACCGCGGTATCCGTGTCTGGGGCAA
GCAGGAGAAGTATGAGGTCCTTTTGAACCCCGATGATGTCGCCGCGGGATATGAGACTCGCATGCGGTGGCGCGATCGGG
CCGACTGGATCGCACCCGATCGACGCACGCACGAAGAGCTGATCCCTGATGAGCTGGCGCAGGCTGTTCGTCTCCGGATG
CAGGCGCGGCGTGGTCCCGGTCGCGTGTGCAGCAGAGAATCGACAGTGCCGTATGCGCTGCGTGGGCTGCTGTTCTGCGC
CGCATGTGGACGGCGAATGCAGGGCGCCGCCCGGCCGGGGAAGCAAACAACGCGGATCCTCTACCGTTGTGAGTTCGGCA
AGTCACGTTCTGTACCTGTGGACCTGAGTGATCATCCGCGCACCGTCTATCTCCGCGAAGACGCAGTGACAGCGCGACTC
GACGAATGGATCGCCACTCTGGCCGATCCAGAAGACCTCGCACGCGGGCAAGACGTGGACCCGGCGGCCGGACCTGGCTA
CGCCGCCTTGCAGCGCCAGCTGAGCGAGGCGAATGCCAAAGTGGCTGCCTTGATCACCGCCGTGGAGTCTGGCGTGGCCG
TTGAGGATCTAACTGCTGCGTTGCGTCAACGTACCGCCGAGCGCGACGAGCTGAGGGCACGCGTTGAGCGAGTGGAGCGG
CCCCGCGCCATGTGTGCCGCCGAGATCAGTGAGTTAGTTAAGGAGTTAGGCGGACTGTCGGTCATCCTCGGCGCGGCAAC
CGGAGCTGAGCGCGCCGAGGTGTACGCAAGCTTGGGCCTGCGTCTCGACTACGACCCGCATCTTCGGCGAGTCACGGCGA
CTGCCGACCTGAGTCGTGTCGCCGGATGTGTCCGAGGGGGGACTTGA

Upstream 100 bases:

>100_bases
TGCCGAACCGGTATCGGCTCCCGCGCGAGGCCAACCGCGCGCTGGTAAACGTCATACTGGCTATGCGGGACCGGACGCCT
AGATCAGGGAGGGGAGTGGC

Downstream 100 bases:

>100_bases
ACCCCCACGCCCGTTAATAGGGCACTAGCACCTCAAGCTAGCGCGTCTGCCATTCCGCCACTCGGACCCGCCCACACCCC
GTGTGGGCAGCTAAGGCTAT

Product: recombinase

Products: NA

Alternate protein names: Resolvase Domain Protein; Resolvase Domain-Containing Protein; Site-Specific Recombinase; Resolvase; Site-Specific DNA Recombinase; Resolvase Domain; Cassette Chromosome Recombinase B; Resolvase Family Site-Specific Recombinase; Integrase/Recombinase; Integrase; DNA Recombinase

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MSLRFAFYGRVSTEDAQDPEASRSWQKRRAIDLISPHGGVLAADYFDIGQSRSLPWKRRPEASRLLADVTSRGRGFDAVV
IGEPARAFYGPQFALTFPVLTHYGVGLWVPEVGGAVDPGSEAHDLVMTLFGGMSKGERARIQMRVRTAMSALAQDTTRYL
GGRPPYGYQLVDAGPHPNPAKASLGQRLHRLEPDPETAPTVERIYRMYADGAGLRFIAQQLTDDGVPSPSQYDPARNRHR
DPRGWSHSAIRAILDNPAYRGIRVWGKQEKYEVLLNPDDVAAGYETRMRWRDRADWIAPDRRTHEELIPDELAQAVRLRM
QARRGPGRVCSRESTVPYALRGLLFCAACGRRMQGAARPGKQTTRILYRCEFGKSRSVPVDLSDHPRTVYLREDAVTARL
DEWIATLADPEDLARGQDVDPAAGPGYAALQRQLSEANAKVAALITAVESGVAVEDLTAALRQRTAERDELRARVERVER
PRAMCAAEISELVKELGGLSVILGAATGAERAEVYASLGLRLDYDPHLRRVTATADLSRVAGCVRGGT

Sequences:

>Translated_548_residues
MSLRFAFYGRVSTEDAQDPEASRSWQKRRAIDLISPHGGVLAADYFDIGQSRSLPWKRRPEASRLLADVTSRGRGFDAVV
IGEPARAFYGPQFALTFPVLTHYGVGLWVPEVGGAVDPGSEAHDLVMTLFGGMSKGERARIQMRVRTAMSALAQDTTRYL
GGRPPYGYQLVDAGPHPNPAKASLGQRLHRLEPDPETAPTVERIYRMYADGAGLRFIAQQLTDDGVPSPSQYDPARNRHR
DPRGWSHSAIRAILDNPAYRGIRVWGKQEKYEVLLNPDDVAAGYETRMRWRDRADWIAPDRRTHEELIPDELAQAVRLRM
QARRGPGRVCSRESTVPYALRGLLFCAACGRRMQGAARPGKQTTRILYRCEFGKSRSVPVDLSDHPRTVYLREDAVTARL
DEWIATLADPEDLARGQDVDPAAGPGYAALQRQLSEANAKVAALITAVESGVAVEDLTAALRQRTAERDELRARVERVER
PRAMCAAEISELVKELGGLSVILGAATGAERAEVYASLGLRLDYDPHLRRVTATADLSRVAGCVRGGT
>Mature_547_residues
SLRFAFYGRVSTEDAQDPEASRSWQKRRAIDLISPHGGVLAADYFDIGQSRSLPWKRRPEASRLLADVTSRGRGFDAVVI
GEPARAFYGPQFALTFPVLTHYGVGLWVPEVGGAVDPGSEAHDLVMTLFGGMSKGERARIQMRVRTAMSALAQDTTRYLG
GRPPYGYQLVDAGPHPNPAKASLGQRLHRLEPDPETAPTVERIYRMYADGAGLRFIAQQLTDDGVPSPSQYDPARNRHRD
PRGWSHSAIRAILDNPAYRGIRVWGKQEKYEVLLNPDDVAAGYETRMRWRDRADWIAPDRRTHEELIPDELAQAVRLRMQ
ARRGPGRVCSRESTVPYALRGLLFCAACGRRMQGAARPGKQTTRILYRCEFGKSRSVPVDLSDHPRTVYLREDAVTARLD
EWIATLADPEDLARGQDVDPAAGPGYAALQRQLSEANAKVAALITAVESGVAVEDLTAALRQRTAERDELRARVERVERP
RAMCAAEISELVKELGGLSVILGAATGAERAEVYASLGLRLDYDPHLRRVTATADLSRVAGCVRGGT

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60514; Mature: 60383

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLRFAFYGRVSTEDAQDPEASRSWQKRRAIDLISPHGGVLAADYFDIGQSRSLPWKRRP
CCEEEEEECCCCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEEHHHHCCCCCCCCCCCCC
EASRLLADVTSRGRGFDAVVIGEPARAFYGPQFALTFPVLTHYGVGLWVPEVGGAVDPGS
HHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCEEEHHHHHHCCCEEEECCCCCCCCCCC
EAHDLVMTLFGGMSKGERARIQMRVRTAMSALAQDTTRYLGGRPPYGYQLVDAGPHPNPA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCH
KASLGQRLHRLEPDPETAPTVERIYRMYADGAGLRFIAQQLTDDGVPSPSQYDPARNRHR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCC
DPRGWSHSAIRAILDNPAYRGIRVWGKQEKYEVLLNPDDVAAGYETRMRWRDRADWIAPD
CCCCCCHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCHHHCCHHHHHHHHHCCCCCCCC
RRTHEELIPDELAQAVRLRMQARRGPGRVCSRESTVPYALRGLLFCAACGRRMQGAARPG
CCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
KQTTRILYRCEFGKSRSVPVDLSDHPRTVYLREDAVTARLDEWIATLADPEDLARGQDVD
CHHHEEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHCCCCCC
PAAGPGYAALQRQLSEANAKVAALITAVESGVAVEDLTAALRQRTAERDELRARVERVER
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
PRAMCAAEISELVKELGGLSVILGAATGAERAEVYASLGLRLDYDPHLRRVTATADLSRV
HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCEECCCHHHHEEEHHHHHHHH
AGCVRGGT
HHHHCCCC
>Mature Secondary Structure 
SLRFAFYGRVSTEDAQDPEASRSWQKRRAIDLISPHGGVLAADYFDIGQSRSLPWKRRP
CEEEEEECCCCCCCCCCCHHHHHHHHHHHHEEECCCCCEEEEHHHHCCCCCCCCCCCCC
EASRLLADVTSRGRGFDAVVIGEPARAFYGPQFALTFPVLTHYGVGLWVPEVGGAVDPGS
HHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCEEEHHHHHHCCCEEEECCCCCCCCCCC
EAHDLVMTLFGGMSKGERARIQMRVRTAMSALAQDTTRYLGGRPPYGYQLVDAGPHPNPA
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCH
KASLGQRLHRLEPDPETAPTVERIYRMYADGAGLRFIAQQLTDDGVPSPSQYDPARNRHR
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHCCC
DPRGWSHSAIRAILDNPAYRGIRVWGKQEKYEVLLNPDDVAAGYETRMRWRDRADWIAPD
CCCCCCHHHHHHHHCCCCCCCEEECCCCCCEEEEECCCHHHCCHHHHHHHHHCCCCCCCC
RRTHEELIPDELAQAVRLRMQARRGPGRVCSRESTVPYALRGLLFCAACGRRMQGAARPG
CCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
KQTTRILYRCEFGKSRSVPVDLSDHPRTVYLREDAVTARLDEWIATLADPEDLARGQDVD
CHHHEEEEEEECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCHHHHHCCCCCC
PAAGPGYAALQRQLSEANAKVAALITAVESGVAVEDLTAALRQRTAERDELRARVERVER
CCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHH
PRAMCAAEISELVKELGGLSVILGAATGAERAEVYASLGLRLDYDPHLRRVTATADLSRV
HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCEECCCHHHHEEEHHHHHHHH
AGCVRGGT
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA