| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108800076
Identifier: 108800076
GI number: 108800076
Start: 3290717
End: 3291649
Strand: Reverse
Name: 108800076
Synonym: Mmcs_3110
Alternate gene names: NA
Gene position: 3291649-3290717 (Counterclockwise)
Preceding gene: 108800077
Following gene: 108800067
Centisome position: 57.69
GC content: 66.24
Gene sequence:
>933_bases ATGCCCGAGCCGACGATCGAGGTCATCATCCCGGTCCGCGATATGGCCGAGCACCTGCCGAAGTTACTCCGACCGCTGTA CGACCAGATGTCAGATGGCGATCGGGTCACCGTGGTCGACGACGCTTCTCGCGACGACACCGAAGCGGTGGCGCGCTCGC TGGGGGCCGGTGTCGTGGCGTTGAAAGACAGCCGCGGCCCCTACTATGCGCGCCAGGTCGCGGCGAGCAGATCAACCGCT GACGTCCTGCTGTTCACCGACGCACGGTGCCGGCCTCTTCCTGGTCTACTCGAGGCGCATCGCGACCTCCAGGAGAGGCC CGGAGTTGCGTTGTCGTGCACCAACGTTCGCACGTTGTCTGGGCCCAGACTCGCGGCGCGACTGGCGGCCAGCATGCAGC CGTTCATGCTTCCGCGCGGCGGCGGGGCGATGAAGGCGACCATCGGCATGGTGCCGCCGCGGCCCGACTACTATCCGACC GCCAATCTGGGTATCGACAGGATCGCCTTCGCCAAGGTGGGCGGGTTCCGATCGATGCGCGGCGGCGGCGACACCGACAT CTGCTGGCGCATCCAGGAGCAGTCACTCGGCACGATCGCCACCGACACCCGCGTCCTGATGGAGTGGGAGCCGCGGACCT CGATGCGAGACCTCGCAAGTCAATGGAAGCGATACGGGCACAGCAACGCCTACATGCGCTGGGTGCACCGCAACGACGAC GTCAGCAAGGGCGACGACTCGCCACGACGACATTCGCCGATGGAGGCCTGGGCGACGCTGCGAGCCGAACTGCGACGACC GCCGGCCGAACTGGCAGCCACGGCACTCGTCGGTTTGGCCTTCCAGTACGGCTACTTCTCGGCGAAGTTCAAGAGTTCGC AGTTCGAGATGCCGGCGTACTTCGATGTGGCGCCGAATCTCGACTCCGCCTGA
Upstream 100 bases:
>100_bases CGACGGCGATGCGGATGGCCTTCGCGCTGGGCATGCTCGTCGAAGAGGCGAAGATCCTGTCGCGTTGAGCCCTGCAATGG CTTCTCAAGGAGGTTGATCG
Downstream 100 bases:
>100_bases CGGCTCTGAGCATTCGTCTAGGCAGGCGTGTGTCGCTCACGGTTCAGGAGGCGCGCCGTGGTCCGCGCCGCCACCCTTGG GGCCTGCCGTCGCTGCTTCC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: Family 2 Glycosyl Transferase; Glycosyl Transferase Group 2 Family Protein
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MPEPTIEVIIPVRDMAEHLPKLLRPLYDQMSDGDRVTVVDDASRDDTEAVARSLGAGVVALKDSRGPYYARQVAASRSTA DVLLFTDARCRPLPGLLEAHRDLQERPGVALSCTNVRTLSGPRLAARLAASMQPFMLPRGGGAMKATIGMVPPRPDYYPT ANLGIDRIAFAKVGGFRSMRGGGDTDICWRIQEQSLGTIATDTRVLMEWEPRTSMRDLASQWKRYGHSNAYMRWVHRNDD VSKGDDSPRRHSPMEAWATLRAELRRPPAELAATALVGLAFQYGYFSAKFKSSQFEMPAYFDVAPNLDSA
Sequences:
>Translated_310_residues MPEPTIEVIIPVRDMAEHLPKLLRPLYDQMSDGDRVTVVDDASRDDTEAVARSLGAGVVALKDSRGPYYARQVAASRSTA DVLLFTDARCRPLPGLLEAHRDLQERPGVALSCTNVRTLSGPRLAARLAASMQPFMLPRGGGAMKATIGMVPPRPDYYPT ANLGIDRIAFAKVGGFRSMRGGGDTDICWRIQEQSLGTIATDTRVLMEWEPRTSMRDLASQWKRYGHSNAYMRWVHRNDD VSKGDDSPRRHSPMEAWATLRAELRRPPAELAATALVGLAFQYGYFSAKFKSSQFEMPAYFDVAPNLDSA >Mature_309_residues PEPTIEVIIPVRDMAEHLPKLLRPLYDQMSDGDRVTVVDDASRDDTEAVARSLGAGVVALKDSRGPYYARQVAASRSTAD VLLFTDARCRPLPGLLEAHRDLQERPGVALSCTNVRTLSGPRLAARLAASMQPFMLPRGGGAMKATIGMVPPRPDYYPTA NLGIDRIAFAKVGGFRSMRGGGDTDICWRIQEQSLGTIATDTRVLMEWEPRTSMRDLASQWKRYGHSNAYMRWVHRNDDV SKGDDSPRRHSPMEAWATLRAELRRPPAELAATALVGLAFQYGYFSAKFKSSQFEMPAYFDVAPNLDSA
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34316; Mature: 34185
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEPTIEVIIPVRDMAEHLPKLLRPLYDQMSDGDRVTVVDDASRDDTEAVARSLGAGVVA CCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCEEE LKDSRGPYYARQVAASRSTADVLLFTDARCRPLPGLLEAHRDLQERPGVALSCTNVRTLS EECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCEEECC GPRLAARLAASMQPFMLPRGGGAMKATIGMVPPRPDYYPTANLGIDRIAFAKVGGFRSMR CHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC GGGDTDICWRIQEQSLGTIATDTRVLMEWEPRTSMRDLASQWKRYGHSNAYMRWVHRNDD CCCCCCEEEEECCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCC VSKGDDSPRRHSPMEAWATLRAELRRPPAELAATALVGLAFQYGYFSAKFKSSQFEMPAY CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEE FDVAPNLDSA EECCCCCCCC >Mature Secondary Structure PEPTIEVIIPVRDMAEHLPKLLRPLYDQMSDGDRVTVVDDASRDDTEAVARSLGAGVVA CCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHCCCEEE LKDSRGPYYARQVAASRSTADVLLFTDARCRPLPGLLEAHRDLQERPGVALSCTNVRTLS EECCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEECCEEECC GPRLAARLAASMQPFMLPRGGGAMKATIGMVPPRPDYYPTANLGIDRIAFAKVGGFRSMR CHHHHHHHHHCCCCEEEECCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC GGGDTDICWRIQEQSLGTIATDTRVLMEWEPRTSMRDLASQWKRYGHSNAYMRWVHRNDD CCCCCCEEEEECCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHCCCCCEEEEEECCCC VSKGDDSPRRHSPMEAWATLRAELRRPPAELAATALVGLAFQYGYFSAKFKSSQFEMPAY CCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCEE FDVAPNLDSA EECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA