Click here to switch to the map view.

The map label for this gene is 108800052

Identifier: 108800052

GI number: 108800052

Start: 3263756

End: 3264166

Strand: Reverse

Name: 108800052

Synonym: Mmcs_3086

Alternate gene names: NA

Gene position: 3264166-3263756 (Counterclockwise)

Preceding gene: 108800053

Following gene: 108800050

Centisome position: 57.21

GC content: 72.51

Gene sequence:

>411_bases
GTGAGCCATCCCGAATCCCGGCACATCGCCGTCTGGGTCGCCGCCCCGCCGAACGTGGTGTACGACCTGGCCGCCGACCC
GGCGACCTGGCCCCGGTGGGCGGCCGGCCTGGCCCGGGGCGGGCTGCGACAGGGCCCGCAGGGGTGGGTGGCCGACTCCC
CGATGGGCGAGGTGGTCGTCGAGTTCTCCCCGCCCAACGAATTCGGTGTGCTCGACCATGTGGTGCGGATGCCGTCCGGT
GAGGCGGTCTACAACCCGCTGCGGGTGGTGCCGGCCGGAGCGGGGGAGCCGCGTTGCGAGGTGGTGTTCAGCCTGCGGCG
GCGTGACGATATGACCGACGAGCAGTTCGAGCAGGATGCGGCGGCGGTGACGGCCGATCTCGAGGCGCTGCGCGATCTGG
TCGAGGGTTAG

Upstream 100 bases:

>100_bases
GAACTCGACCAGTCACTGCGGGTGACGCCCTCGTCGGCGCTGATGGGGGATCTCAAGGCGCTGCTCGGCCCTGGCTGTCT
CGGGGGTTGAGGTGACCGCG

Downstream 100 bases:

>100_bases
CGGCGGCCGTTGCAGACGAGGCCGAACCCCACCCAGCTGACCGTGGCGGCCGCGGCGCCCGACAGCACCGCCGGTGCCGC
GCTCATCGTCACCACGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 135

Protein sequence:

>136_residues
MSHPESRHIAVWVAAPPNVVYDLAADPATWPRWAAGLARGGLRQGPQGWVADSPMGEVVVEFSPPNEFGVLDHVVRMPSG
EAVYNPLRVVPAGAGEPRCEVVFSLRRRDDMTDEQFEQDAAAVTADLEALRDLVEG

Sequences:

>Translated_136_residues
MSHPESRHIAVWVAAPPNVVYDLAADPATWPRWAAGLARGGLRQGPQGWVADSPMGEVVVEFSPPNEFGVLDHVVRMPSG
EAVYNPLRVVPAGAGEPRCEVVFSLRRRDDMTDEQFEQDAAAVTADLEALRDLVEG
>Mature_135_residues
SHPESRHIAVWVAAPPNVVYDLAADPATWPRWAAGLARGGLRQGPQGWVADSPMGEVVVEFSPPNEFGVLDHVVRMPSGE
AVYNPLRVVPAGAGEPRCEVVFSLRRRDDMTDEQFEQDAAAVTADLEALRDLVEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14773; Mature: 14641

Theoretical pI: Translated: 4.32; Mature: 4.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPESRHIAVWVAAPPNVVYDLAADPATWPRWAAGLARGGLRQGPQGWVADSPMGEVVV
CCCCCCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
EFSPPNEFGVLDHVVRMPSGEAVYNPLRVVPAGAGEPRCEVVFSLRRRDDMTDEQFEQDA
EECCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHH
AAVTADLEALRDLVEG
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHPESRHIAVWVAAPPNVVYDLAADPATWPRWAAGLARGGLRQGPQGWVADSPMGEVVV
CCCCCCEEEEEEECCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEE
EFSPPNEFGVLDHVVRMPSGEAVYNPLRVVPAGAGEPRCEVVFSLRRRDDMTDEQFEQDA
EECCCCCCCHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHH
AAVTADLEALRDLVEG
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA