| Definition | Mycobacterium sp. MCS chromosome, complete genome. |
|---|---|
| Accession | NC_008146 |
| Length | 5,705,448 |
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The map label for this gene is 108799963
Identifier: 108799963
GI number: 108799963
Start: 3167797
End: 3168624
Strand: Reverse
Name: 108799963
Synonym: Mmcs_2997
Alternate gene names: NA
Gene position: 3168624-3167797 (Counterclockwise)
Preceding gene: 108799964
Following gene: 108799962
Centisome position: 55.54
GC content: 62.92
Gene sequence:
>828_bases ATGATCGGGCCCGACGAATGGGGCTGTCCTTTGAGTTTGTGGTTGGTCAGCCACCTGCCGTCGTGGCTTCTGTTGCTCGT GCTGATAACGGTCACGAGTGGCACAGCGGTTGCCGTCCAGGCGATTGTCCGCCGCCGGTTCGCAACTCACCTCAGAAGCG ACGAGCACAACGACGTGACGAAGTTCGCCTTCGGGGTCATCGGCTTCGTCTTCGCCTTCTTCATCGGATTCGTGGTGTCG GCGACATGGGGTCAGATCAACAGCGCAGACGGCAGGGCGCGCGCCGAAGGGGCGGCGGGCGCTCAGCTCGCCAGAGATCT CCAGGTCTTCGACGAGCCTGACCGAGACCGGATCCGGCAGAGCCTGTTGGCCTACCATCAGGCCGCGATAACCGAGTGGA ACGAAGCCACCGAGGGCAGGTCGTTGCCCGCCGCCGACGATGCGCTCAACCGCGTCTATCTCGCATACGAGCAGGTCGAG GCGCGCACCGATGCGCAGAAGGCGCTGCTGTCCGCTTCATTCTCCAACCTCAGCGACATGAACAAGGCTCGCTCCGAGCG TGTGCTCCAAGCCCGCACCGACACCGGTCCGCCGTGGTCGTTATGGGCCGTCATCTTGCTCACGAGCAGTCTGCTCCTGG GCTGCGCGATCATTTATGGCGTCGAGAGTGCGGCATCGCACTACACGATGGTTGCCATTTTGGGTGTGCTTGTCGGGGCG CAGTTGTTCTTGGTGTTGGAGCTGTCGCATCCATTCGTCGGCGAGGTCGCGACGTCCTCCGAGCCGCTGAAACAGGTGGT CCGCGTCCTTCAGTCCAATCCCGGCTAG
Upstream 100 bases:
>100_bases GGTCAACCCGCTGACTCCAGGGGATTCGGCGCACGAAAAGCGGCGTTCGCCCTCGGGCGCCGAGTCGCGCACCTAGAGTC GGAAAGCCCGTGTCAGCGAA
Downstream 100 bases:
>100_bases ATAGCTGTGGCCCGCATGTCGAGCGCACCGCGCGCCTCGTTGCTTTTGCGAAGAAGATGCACTGGTCAACTGCGCTGAGC CGCGTCCGGTAACCGAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MIGPDEWGCPLSLWLVSHLPSWLLLLVLITVTSGTAVAVQAIVRRRFATHLRSDEHNDVTKFAFGVIGFVFAFFIGFVVS ATWGQINSADGRARAEGAAGAQLARDLQVFDEPDRDRIRQSLLAYHQAAITEWNEATEGRSLPAADDALNRVYLAYEQVE ARTDAQKALLSASFSNLSDMNKARSERVLQARTDTGPPWSLWAVILLTSSLLLGCAIIYGVESAASHYTMVAILGVLVGA QLFLVLELSHPFVGEVATSSEPLKQVVRVLQSNPG
Sequences:
>Translated_275_residues MIGPDEWGCPLSLWLVSHLPSWLLLLVLITVTSGTAVAVQAIVRRRFATHLRSDEHNDVTKFAFGVIGFVFAFFIGFVVS ATWGQINSADGRARAEGAAGAQLARDLQVFDEPDRDRIRQSLLAYHQAAITEWNEATEGRSLPAADDALNRVYLAYEQVE ARTDAQKALLSASFSNLSDMNKARSERVLQARTDTGPPWSLWAVILLTSSLLLGCAIIYGVESAASHYTMVAILGVLVGA QLFLVLELSHPFVGEVATSSEPLKQVVRVLQSNPG >Mature_275_residues MIGPDEWGCPLSLWLVSHLPSWLLLLVLITVTSGTAVAVQAIVRRRFATHLRSDEHNDVTKFAFGVIGFVFAFFIGFVVS ATWGQINSADGRARAEGAAGAQLARDLQVFDEPDRDRIRQSLLAYHQAAITEWNEATEGRSLPAADDALNRVYLAYEQVE ARTDAQKALLSASFSNLSDMNKARSERVLQARTDTGPPWSLWAVILLTSSLLLGCAIIYGVESAASHYTMVAILGVLVGA QLFLVLELSHPFVGEVATSSEPLKQVVRVLQSNPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29934; Mature: 29934
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGPDEWGCPLSLWLVSHLPSWLLLLVLITVTSGTAVAVQAIVRRRFATHLRSDEHNDVT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHH KFAFGVIGFVFAFFIGFVVSATWGQINSADGRARAEGAAGAQLARDLQVFDEPDRDRIRQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHH SLLAYHQAAITEWNEATEGRSLPAADDALNRVYLAYEQVEARTDAQKALLSASFSNLSDM HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKARSERVLQARTDTGPPWSLWAVILLTSSLLLGCAIIYGVESAASHYTMVAILGVLVGA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLFLVLELSHPFVGEVATSSEPLKQVVRVLQSNPG HHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MIGPDEWGCPLSLWLVSHLPSWLLLLVLITVTSGTAVAVQAIVRRRFATHLRSDEHNDVT CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCHHH KFAFGVIGFVFAFFIGFVVSATWGQINSADGRARAEGAAGAQLARDLQVFDEPDRDRIRQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCHHHHHH SLLAYHQAAITEWNEATEGRSLPAADDALNRVYLAYEQVEARTDAQKALLSASFSNLSDM HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NKARSERVLQARTDTGPPWSLWAVILLTSSLLLGCAIIYGVESAASHYTMVAILGVLVGA HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QLFLVLELSHPFVGEVATSSEPLKQVVRVLQSNPG HHHHHHCCCCCCHHHHHCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA